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iPortal: the swiss grid proteomics portal: Requirements and new features based on experience and usability considerations

Peter Kunszt, Lorenz Blum, Béla Hullár, Emanuel Schmid, Adam Srebniak, Witold Wolski, Bernd Rinn, Franz-Josef Elmer, Chandrasekhar Ramakrishnan, Andreas Quandt, Lars Malmström
<span title="2014-05-13">2014</span> <i title="Wiley"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/o454xj4tdjfllm3oragfkdrffi" style="color: black;">Concurrency and Computation</a> </i> &nbsp;
In a second, highly upgraded version of the Swiss Proteomics Portal, called iPortal, we have introduced several new concepts based on this feedback and both user and supporter experience.  ...  We have received feedback from our users and supporters on the functionality and usability of the Swiss Grid Proteomics Portal during its first year of operation.  ...  In this paper we elaborate on the experiences of operating the portal, leading to new requirements and the implementation of new features.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/cpe.3294">doi:10.1002/cpe.3294</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/my5jm7ndcnh7doihpjjgdnknyq">fatcat:my5jm7ndcnh7doihpjjgdnknyq</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20191210054133/http://ceur-ws.org/Vol-993/paper18.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/f4/d7/f4d768711feb105b9a32b33954552369057b7d02.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/cpe.3294"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> wiley.com </button> </a>

qPortal: A platform for data-driven biomedical research

Christopher Mohr, Andreas Friedrich, David Wojnar, Erhan Kenar, Aydin Can Polatkan, Marius Cosmin Codrea, Stefan Czemmel, Oliver Kohlbacher, Sven Nahnsen, Frederique Lisacek
<span title="2018-01-19">2018</span> <i title="Public Library of Science (PLoS)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/s3gm7274mfe6fcs7e3jterqlri" style="color: black;">PLoS ONE</a> </i> &nbsp;
Here, we illustrate the feature-rich portal by simulating a biomedical study based on publically available data. We demonstrate the software's strength in supporting the entire project life cycle.  ...  Users are empowered to conduct their experiments from the experimental design to the visualization of their results through the platform.  ...  The authors thank the openBIS Helpdesk for their fast and insightful answers regarding our questions.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1371/journal.pone.0191603">doi:10.1371/journal.pone.0191603</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/29352322">pmid:29352322</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5774839/">pmcid:PMC5774839</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/krsc5gog2be7nc4qxb7ddyld3u">fatcat:krsc5gog2be7nc4qxb7ddyld3u</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180719033848/http://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0191603&amp;type=printable" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/5c/0b/5c0b0867a6404debd5546ae2bfc690dba1f5e4ed.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1371/journal.pone.0191603"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> plos.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5774839" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>