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Visualization of White Matter Tracts with Wrapped Streamlines
IEEE Visualization 2005 - (VIS'05)
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Instead, we generate surfaces wrapping bundles of lines. Thereby, a more intuitive representation of different tracts is achieved. ...
From the medical point of view, the data is of special interest due to different diffusion characteristics of varying brain tissue allowing conclusions about the underlying structures such as white matter ...
From a surgical point of view the representation of white matter tracts is still insufficient and single streamlines are of minor inter-est. ...
doi:10.1109/vis.2005.123
fatcat:bd4e3cqruraqznkauggf73flsu
Visualization of White Matter Tracts with Wrapped Streamlines
VIS 05. IEEE Visualization, 2005.
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Instead, we generate surfaces wrapping bundles of lines. Thereby, a more intuitive representation of different tracts is achieved. ...
From the medical point of view, the data is of special interest due to different diffusion characteristics of varying brain tissue allowing conclusions about the underlying structures such as white matter ...
From a surgical point of view the representation of white matter tracts is still insufficient and single streamlines are of minor inter-est. ...
doi:10.1109/visual.2005.1532777
dblp:conf/visualization/EndersSMHNS05
fatcat:lw2iwnkcerdvdjfwsz7dsmfpim
Visualization Strategies for Major White Matter Tracts for Intraoperative Use
2006
International Journal of Computer Assisted Radiology and Surgery
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Streamline representation of major fiber tract systems along with high-resolution anatomical data provides a reliable orientation for the neurosurgeon. ...
For intraoperative visualization of these data either on navigation screens near the surgical field or directly in the surgical field applying heads-up displays of operating microscopes, wrapping of all ...
This work was supported in part by the Deutsche Forschungsgemeinschaft in the context of project C9 of SFB603. ...
doi:10.1007/s11548-006-0003-2
fatcat:jf2l24yk4bcqhbw4ldeftraehu
Visualization strategies for major white matter tracts identified by diffusion tensor imaging for intraoperative use
2005
Excerpta Medica: International Congress Series
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For direct visualization of these data in the surgical field applying heads-up displays of operating microscopes, wrapping of all streamlines of interest to render an individual object representing the ...
Streamline representation of major fiber tract systems along with high-resolution anatomical data provides a reliable orientation for the neurosurgeon. ...
Additional intraoperative acquisition of DTI data with fiber tract reconstruction visualizes the potential shifting of major white matter tracts. ...
doi:10.1016/j.ics.2005.03.014
fatcat:bugttke5tjg5xpsyij7hffdhqe
Isosurface-Based Generation of Hulls Encompassing Neuronal Pathways
2009
Stereotactic and Functional Neurosurgery
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Abstract Background: Diffusion tensor imaging provides information about the location of white matter tracts within the human brain. ...
The resulting streamline bundles approximate the course of the underlying white matter structures and indicate their shape and location in 3 dimensions as well as the spatial relation with respect to surrounding ...
Acknowledgments This work was supported by the Deutsche Forschungsgemeinschaft in the context of SFB 603, Project C9 and the Graduate Research Center '3D Image Analysis and Synthesis'. ...
doi:10.1159/000195720
pmid:19174621
fatcat:yi25umpcmrh7rihst5sznanz3a
Computational neuroanatomy of human stratum proprium of interparietal sulcus
[article]
2017
bioRxiv
pre-print
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Recent advances in diffusion-weighted MRI (dMRI) and tractography have enabled identification of major long-range white matter tracts in the human brain. ...
In sum, we show that SPIS is a short-range tract connecting the superior and inferior parts of the parietal cortex, wrapping around the intraparietal sulcus, and that it may be a crucial anatomy underlying ...
Estimating cortical endpoints of the tract Streamlines terminate at the boundary between the white matter and grey matter. ...
doi:10.1101/126961
fatcat:5mnzltulivgivew2hhpodxyyja
Computational neuroanatomy of human stratum proprium of interparietal sulcus
2017
Brain Structure and Function
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Recent advances in diffusion-weighted MRI (dMRI) and tractography have enabled identification of several long-range white matter tracts in the human brain. ...
In sum, we show that SPIS is a short-range tract connecting the superior and inferior parts of the parietal cortex, wrapping around the intraparietal sulcus, and that it may be a . ...
Estimating cortical endpoints of the tract Streamlines terminate at the boundary between the white matter and grey matter. ...
doi:10.1007/s00429-017-1492-1
pmid:28871500
pmcid:PMC5772143
fatcat:2wcrbjhu5vgezdflmmgqyavmvu
The 3D visualization of brain anatomy from diffusion-weighted magnetic resonance imaging data
2004
Proceedings of the 2nd international conference on Computer graphics and interactive techniques in Austalasia and Southe East Asia - GRAPHITE '04
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This paper introduces several novel techniques to identify and visualize nerve fiber tracts and different tissue types using diffusion-weighted magnetic resonance imaging data. ...
Finally streamtubes and hyperstreamlines represent the full 3D structure of nerve fiber tracts and their inherent diffusion properties. ...
Basser from the National Institute of Health, Bethesda, MD, for valuable discussions and Carlo Pierpaoli for providing us with the diffusion tensor data set of a healthy brain. ...
doi:10.1145/988834.988848
dblp:conf/graphite/WunscheL04
fatcat:nurnoeolgjcdpaptsl3h5zaxfi
New Perspectives on Genomic Imprinting, an Essential and Multifaceted Mode of Epigenetic Control in the Developing and Adult Brain
2016
Annual Review of Neuroscience
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This review describes the fundamental ideas of the MRI methods used to identify the major white matter tracts in the living human brain. ...
Progress in magnetic resonance imaging (MRI) now makes it possible to identify the major white matter tracts in the living human brain. ...
Taken as a whole, these streamlines make up the connectome and are a model of the geometry of the white matter tracts. ...
doi:10.1146/annurev-neuro-061010-113708
pmid:27145912
pmcid:PMC5125552
fatcat:zr75fzldtzgttf5z6o7bungbki
White Matter Consequences of Retinal Receptor and Ganglion Cell Damage
2014
Investigative Ophthalmology and Visual Science
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Both photoreceptor layer (CRD) and retinal ganglion cell (LHON) retinal disease causes substantial change in the visual white matter. These changes can be measured using diffusion MRI. ...
In both types of patients, diffusion measures within the optic tract and the optic radiation differ from controls. ...
Acknowledgments The authors thank Keigo Shikishima, Masako Takimoto, Shoyo Yoshimine, and Takaaki Hayashi for clinical evaluation of the patients, Satoshi Nakadomari for discussions, Ariel Rokem and Lee ...
doi:10.1167/iovs.14-14737
pmid:25257055
pmcid:PMC4215745
fatcat:mm7ycijcmbfh7eyt5qwnxfj6qi
Reconstruction of White Matter Tracts via Repeated Deterministic Streamline Tracking – Initial Experience
2013
PLoS ONE
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Since routinely used deterministic streamline tractography approaches often underestimate the spatial extent of white matter tracts, a novel approach to improve fiber segmentation is presented here, considering ...
Diffusion Tensor Imaging (DTI) and fiber tractography are established methods to reconstruct major white matter tracts in the human brain in-vivo. ...
Bartsch, PhD (Dept. of Neurosurgery, Marburg), for proofreading of the manuscript.
Author Contributions ...
doi:10.1371/journal.pone.0063082
pmid:23671656
pmcid:PMC3646033
fatcat:glzd5zt4pvdgljxx4eugz3omsm
Clarifying Human White Matter
2016
Annual Review of Neuroscience
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This review describes the fundamental ideas of the MRI methods used to identify the major white matter tracts in the living human brain. ...
Progress in magnetic resonance imaging (MRI) now makes it possible to identify the major white matter tracts in the living human brain. ...
Taken as a whole, these streamlines make up the connectome and are a model of the geometry of the white matter tracts. ...
doi:10.1146/annurev-neuro-070815-013815
pmid:27050319
fatcat:bjctv7l5wzgcfm5arcxzjg2hxu
Feature Extraction for DW-MRI Visualization: The State of the Art and Beyond
2011
Dagstuhl Publications
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In particular, it has been explored widely for imaging nerve fiber tracts in the human brain. Geometric features provide a quick visual overview of the complex datasets that arise from DW-MRI. ...
It is the goal of this paper to survey contributions from all these fields, concentrating on streamline clustering, edge detection and segmentation, topological methods, and extraction of anisotropy creases ...
Acknowledgement I would like to thank Gordon Kindlmann for helpful discussions about this paper, and Alfred Anwander (MPI CBS, Leipzig, Germany) for providing the DW-MRI dataset that was used to create some of ...
doi:10.4230/dfu.vol2.sciviz.2011.322
dblp:conf/dagstuhl/Schultz11
fatcat:4ovqks4gcbf5fadsjj3ts7b2nq
Uncertainty in the DTI Visualization Pipeline
[chapter]
2021
Mathematics and Visualization
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AbstractDiffusion-Weighted Magnetic Resonance Imaging (DWI) enables the in-vivo visualization of fibrous tissues such as white matter in the brain. ...
We conclude our discussion with an overview of potential research directions. ...
Numerous strategies have been introduced for the visualization of the white matter tracts, such as thin polylines [70] illuminated streamlines [114] or cylindrical tubes [8] . Zhang et al. ...
doi:10.1007/978-3-030-56215-1_6
fatcat:xzsq2m7myjcxrddzne5lv2byiq
The porcine corticospinal decussation: A combined neuronal tracing and tractography study
2018
Brain Research Bulletin
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of the Göttingen minipig corticospinal tract. ...
The Göttingen minipig corticospinal tract was investigated, in the same animals, with in vivo neuronal tracing and with postmortem diffusion weighted MRI tractography to provide a thorough insight in the ...
Anne Sofie Møller Andersen, and the help of Påskehøjgaard animal facility. ...
doi:10.1016/j.brainresbull.2018.08.004
pmid:30086351
fatcat:3mpdbhb5krc75prxur5xf3iove
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