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A GPU-based interactive bio-inspired visual clustering

Ugo Erra, Bernardino Frola, Vittorio Scarano
<span title="">2011</span> <i title="IEEE"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/hm67umrkt5g6jddcxqshfa7whm" style="color: black;">2011 IEEE Symposium on Computational Intelligence and Data Mining (CIDM)</a> </i> &nbsp;
The proposed approach is based on a bio-inspired collective behavioral model used in a 3D graphics environment.  ...  In this work, we present an interactive visual clustering approach for the exploration and analysis of vast volumes of data.  ...  CONCLUSIONS AND FUTURE WORKS [ELENCARE RISULTATI] In this work, we proposed a nature inspired clustering model and presented an efficient implementation for the GPU.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/cidm.2011.5949300">doi:10.1109/cidm.2011.5949300</a> <a target="_blank" rel="external noopener" href="https://dblp.org/rec/conf/cidm/ErraFS11.html">dblp:conf/cidm/ErraFS11</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/kv4ygaglzbcb7hmbueqip5waqa">fatcat:kv4ygaglzbcb7hmbueqip5waqa</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170810220532/http://isis.dia.unisa.it/papers/cidm11_efs.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/09/fe/09fe1fc17c42f11ba55a4588995306261753f060.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/cidm.2011.5949300"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> ieee.com </button> </a>

Fusion of Audio- and Visual Cues for Real-Life Emotional Human Robot Interaction [chapter]

Ahmad Rabie, Uwe Handmann
<span title="">2011</span> <i title="Springer Berlin Heidelberg"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/2w3awgokqne6te4nvlofavy5a4" style="color: black;">Lecture Notes in Computer Science</a> </i> &nbsp;
In this paper, we present a study on multimodal recognition of emotions from such auditive and visual cues for interaction interfaces.  ...  A probabilistic decision level fusion scheme based on Bayesian networks is applied to draw benefit of the complementary information from boththe acoustic and the visual -cues.  ...  to deal with the affective state of a user has become obvious for efficient and user-friendly human-computer interaction.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1007/978-3-642-23123-0_35">doi:10.1007/978-3-642-23123-0_35</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/kc4kwmhdubglvkidd5n2l2i55i">fatcat:kc4kwmhdubglvkidd5n2l2i55i</a> </span>
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What is Interaction for Data Visualization?

Evanthia Dimara, Charles Perin
<span title="2019-08-19">2019</span> <i title="Institute of Electrical and Electronics Engineers (IEEE)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/hjrujdrg7zaghbdsp5pdzq7cmm" style="color: black;">IEEE Transactions on Visualization and Computer Graphics</a> </i> &nbsp;
Our definition is meant to be a thinking tool and inspire novel and bolder interaction design practices.  ...  By extracting commonalities and differences between the views of interaction in visualization and in HCI, we synthesize a definition of interaction for visualization.  ...  This allows for a technology-agnostic perspective including non-computerized visualization such as physicalizations, infographics and bio-inspired visualizations [89] .  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/tvcg.2019.2934283">doi:10.1109/tvcg.2019.2934283</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/31425089">pmid:31425089</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/anuil4huvrdfre3l5jdmsgtvei">fatcat:anuil4huvrdfre3l5jdmsgtvei</a> </span>
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A framework for GPU-based application-independent 3D interactions

Harlen Costa Batagelo, Shin-Ting Wu
<span title="2008-09-02">2008</span> <i title="Springer Nature"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/yx6ragzaojavld2pw4coglzb2e" style="color: black;">The Visual Computer</a> </i> &nbsp;
filters pipeline via a visual modeling tool environment.  ...  Different interactions and reactions involving phenolics at the electrodes are the main reasons for such large differences between the models.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1007/s00371-008-0296-y">doi:10.1007/s00371-008-0296-y</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/sl3f6lyyancmdgb3v7kysceuvq">fatcat:sl3f6lyyancmdgb3v7kysceuvq</a> </span>
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Bio-inspired visual attention for silicon retinas based on spiking neural networks applied to pattern classification [article]

Amélie Gruel, Jean Martinet
<span title="2021-05-31">2021</span> <i > arXiv </i> &nbsp; <span class="release-stage" >pre-print</span>
Therefore, they make for a suitable candidate for the efficient processing and classification of incoming event patterns measured by silicon retinas.  ...  In this paper, we review the biological background behind the attentional mechanism, and introduce a case study of event videos classification with SNNs, using a biology-grounded low-level computational  ...  Index Terms-visual attention, silicon retinas, bio-inspiration, spiking neural networks I.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/2105.14753v1">arXiv:2105.14753v1</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/iwpob5wx6bc6tpjpzee6jz5ija">fatcat:iwpob5wx6bc6tpjpzee6jz5ija</a> </span>
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Speech Emotion Recognition With Early Visual Cross-modal Enhancement Using Spiking Neural Networks

Esma Mansouri-Benssassi, Juan Ye
<span title="">2019</span> <i title="IEEE"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/qm5nunzmyva4tfjekdcm34uvhq" style="color: black;">2019 International Joint Conference on Neural Networks (IJCNN)</a> </i> &nbsp;
This method is inspired by the auditory information processing in the brain where auditory information is preceded, enhanced and predicted by a visual processing in multisensory audio-visual processing  ...  The results have demonstrated that SNNs can be an ideal candidate for modeling temporal relationships in speech features and our cross-modal approach can significantly improve the accuracy of SER.  ...  In this paper, we propose a bio-inspired approach that aims to translate interactions between different modalities. III.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/ijcnn.2019.8852473">doi:10.1109/ijcnn.2019.8852473</a> <a target="_blank" rel="external noopener" href="https://dblp.org/rec/conf/ijcnn/Mansouri-Benssassi19.html">dblp:conf/ijcnn/Mansouri-Benssassi19</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/by6d43nu5bfetbdrh5x6id6kuq">fatcat:by6d43nu5bfetbdrh5x6id6kuq</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200506164421/https://research-repository.st-andrews.ac.uk/bitstream/handle/10023/18994/2019IJCNN_Esma.pdf;jsessionid=510C68B1DBFCEF64483B455F3941195F?sequence=1" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/de/78/de78381324f2ca74611646ca4b13d7a5e4688805.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/ijcnn.2019.8852473"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> ieee.com </button> </a>

Spiking Graph Convolutional Networks [article]

Zulun Zhu, Jiaying Peng, Jintang Li, Liang Chen, Qi Yu, Siqiang Luo
<span title="2022-05-05">2022</span> <i > arXiv </i> &nbsp; <span class="release-stage" >pre-print</span>
In a wide range of scenarios (e.g. citation networks, image graph classification, and recommender systems), our experimental results show that the proposed method could gain competitive performance against  ...  In contrast, Spiking Neural Networks (SNNs), which perform a bio-fidelity inference process, offer an energy-efficient neural architecture.  ...  Introduction Graph Neural Networks (GNNs), especially those using convolutional methods, have become a popular computational model for graph data analysis as the high-performance computing systems blossom  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/2205.02767v1">arXiv:2205.02767v1</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/eyf5c6u4ufa65ff25hdcfuqkru">fatcat:eyf5c6u4ufa65ff25hdcfuqkru</a> </span>
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Advanced neural network systems for solving complex real problems

Olga Valenzuela, Fernando Rojas, Ignacio Rojas
<span title="2021-06-01">2021</span> <i title="Springer Science and Business Media LLC"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/rcs76v6h7jf2lnaoy2wi3gg4ny" style="color: black;">Neural Processing Letters</a> </i> &nbsp;
latest discoveries and realizations in the foundations, theory, models and applications of systems inspired on nature, using computational intelligence methodologies, as well as in emerging areas related  ...  Preface The 15th International Work-Conference on Artificial Neural Networks (IWANN) is a biennial meeting seeks to provide a discussion forum for scientists, engineers, educators and students about the  ...  Computational Biology and Bioinformatics. Parallel and Distributed Computing. Human Computer Interaction, Internet Modeling, Communication and Networking. Intelligent Systems in Education.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1007/s11063-021-10542-6">doi:10.1007/s11063-021-10542-6</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/64yftwndvvd3hf2gn75pr2oklm">fatcat:64yftwndvvd3hf2gn75pr2oklm</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210716192910/https://link.springer.com/content/pdf/10.1007/s11063-021-10542-6.pdf?error=cookies_not_supported&amp;code=43d3e8e3-8948-4c71-831e-a35d0b91b6cf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/20/2c/202c2ccc21eff2846cc9132a48a3e3903d3178a5.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1007/s11063-021-10542-6"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> springer.com </button> </a>

Biologically Inspired Intensity and Depth Image Edge Extraction

Dermot Kerr, Sonya Coleman, Thomas Martin McGinnity
<span title="">2018</span> <i title="Institute of Electrical and Electronics Engineers (IEEE)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/j6amxna35bbs5p42wy5crllu2i" style="color: black;">IEEE Transactions on Neural Networks and Learning Systems</a> </i> &nbsp;
Through the use of biologically inspired spiking neural networks we emulate functional computational aspects of biological visual systems.  ...  Results demonstrate that the proposed bio-inspired artificial vision system has increased performance over existing computer vision feature extraction approaches.  ...  Similarly, the bio-inspired scene classification [25] uses a three-layer neural network to classify scenes based on visual features.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/tnnls.2018.2797994">doi:10.1109/tnnls.2018.2797994</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/29994457">pmid:29994457</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/66mdav5fafarnowuo6g7e6qgv4">fatcat:66mdav5fafarnowuo6g7e6qgv4</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180719201745/http://irep.ntu.ac.uk/id/eprint/32785/1/PubSub10012_McGinnity.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/5b/62/5b62b077b990f2bf4535ea264f48c10cc0365501.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/tnnls.2018.2797994"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> ieee.com </button> </a>

Synch-Graph: Multisensory Emotion Recognition Through Neural Synchrony via Graph Convolutional Networks

Esma Mansouri-Benssassi, Juan Ye
<span title="2020-04-03">2020</span> <i title="Association for the Advancement of Artificial Intelligence (AAAI)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/wtjcymhabjantmdtuptkk62mlq" style="color: black;">PROCEEDINGS OF THE THIRTIETH AAAI CONFERENCE ON ARTIFICIAL INTELLIGENCE AND THE TWENTY-EIGHTH INNOVATIVE APPLICATIONS OF ARTIFICIAL INTELLIGENCE CONFERENCE</a> </i> &nbsp;
In this paper, we present a novel bio-inspired approach based on neural synchrony in audio-visual multisensory integration in the brain, named Synch-Graph.  ...  We model multisensory interaction using spiking neural networks (SNN) and explore the use of Graph Convolutional Networks (GCN) to represent and learn neural synchrony patterns.  ...  multiple modalities acquired from a bio-inspired architecturespiking neural network (SNN).  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1609/aaai.v34i02.5491">doi:10.1609/aaai.v34i02.5491</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/v3544eg5azdnrfoojknbk3djtq">fatcat:v3544eg5azdnrfoojknbk3djtq</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20201103205715/https://aaai.org/ojs/index.php/AAAI/article/download/5491/5347" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/fa/22/fa2273947c721407ebfce2d14b1fc1010ca3bc2e.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1609/aaai.v34i02.5491"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

Heterogeneous sensor networks: a bio-inspired overlay architecture

Jerry Burman, Joao Hespanha, Upamanyu Madhow, Daniel Klein, Jason Isaacs, Sriram Venkateswaran, Tien Pham, Michael A. Kolodny
<span title="2010-04-23">2010</span> <i title="SPIE"> Ground/Air Multi-Sensor Interoperability, Integration, and Networking for Persistent ISR </i> &nbsp;
Respondents should be aware that notwithstanding any other provision of law, no person shall be subject to a penalty for failing to comply with a collection of information if it does not display a currently  ...  Public reporting burden for the collection of information is estimated to average 1 hour per response, including the time for reviewing instructions, searching existing data sources, gathering and maintaining  ...  BIO-INSPIRED METHODS FOR UAV PLANNING AND EVENT DETECTION At the ICB, UCSB has been investigating stochastic bio-inspired decision algorithms to control the motion of networks of artificial mobile agents  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1117/12.851533">doi:10.1117/12.851533</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/khcjil3vfrg4bl6bago6xxqvuu">fatcat:khcjil3vfrg4bl6bago6xxqvuu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170922195642/http://www.dtic.mil/get-tr-doc/pdf?AD=ADA504191" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/c7/28/c728d3c43140fdd39d56263ee2448dd6e1ce65ec.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1117/12.851533"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

Heterogeneous sensor networks: a bio-inspired overlay architecture

Jerry Burman, Joao Hespanha, Upamanyu Madhow, Daniel Klein, Tien Pham, Ananthram Swami, Edward M. Carapezza
<span title="2009-05-01">2009</span> <i title="SPIE"> Unattended Ground, Sea, and Air Sensor Technologies and Applications XI </i> &nbsp;
Respondents should be aware that notwithstanding any other provision of law, no person shall be subject to a penalty for failing to comply with a collection of information if it does not display a currently  ...  Public reporting burden for the collection of information is estimated to average 1 hour per response, including the time for reviewing instructions, searching existing data sources, gathering and maintaining  ...  BIO-INSPIRED METHODS FOR UAV PLANNING AND EVENT DETECTION At the ICB, UCSB has been investigating stochastic bio-inspired decision algorithms to control the motion of networks of artificial mobile agents  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1117/12.819221">doi:10.1117/12.819221</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/pnh7rqnpirhlrbga3uju7am2be">fatcat:pnh7rqnpirhlrbga3uju7am2be</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170922195642/http://www.dtic.mil/get-tr-doc/pdf?AD=ADA504191" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/c7/28/c728d3c43140fdd39d56263ee2448dd6e1ce65ec.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1117/12.819221"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

Spiking Neural Networks Hardware Implementations and Challenges

Maxence Bouvier, Alexandre Valentian, Thomas Mesquida, Francois Rummens, Marina Reyboz, Elisa Vianello, Edith Beigne
<span title="2019-04-05">2019</span> <i title="Association for Computing Machinery (ACM)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/c2ubcasn2jaunmzahfcdaeyvry" style="color: black;">ACM Journal on Emerging Technologies in Computing Systems</a> </i> &nbsp;
Neuromorphic computing is henceforth a major research field for both academic and industrial actors.  ...  They are expected to improve the computational performance and efficiency of neural networks, but are best suited for hardware able to support their temporal dynamics.  ...  They are inspired from the hierarchical layering for visual recognition observed in the brain [68, 165] , and have largely contributed to enabling image classification algorithms to reach human performance  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1145/3304103">doi:10.1145/3304103</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/p3frra3osnhybj4hkor4y5cyqm">fatcat:p3frra3osnhybj4hkor4y5cyqm</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200507143428/https://arxiv.org/ftp/arxiv/papers/2005/2005.01467.pdf" title="fulltext PDF download [not primary version]" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <span style="color: #f43e3e;">&#10033;</span> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1145/3304103"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> acm.org </button> </a>

An image representation based convolutional network for DNA classification [article]

Bojian Yin, Marleen Balvert, Davide Zambrano, Alexander Schönhuth, Sander Bohte
<span title="2018-06-13">2018</span> <i > arXiv </i> &nbsp; <span class="release-stage" >pre-print</span>
In this paper we develop a convolutional neural network that takes an image-representation of primary DNA sequence as its input, and predicts key determinants of chromatin structure.  ...  The folding structure of the DNA molecule combined with helper molecules, also referred to as the chromatin, is highly relevant for the functional properties of DNA.  ...  In summary, we present a novel, powerful way to harness the power of CNNs in image classification for predicting biologically relevant features from primary DNA sequence.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1806.04931v1">arXiv:1806.04931v1</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/26lgnsmznvbtth537bkl7fzynu">fatcat:26lgnsmznvbtth537bkl7fzynu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200827001637/https://arxiv.org/pdf/1806.04931v1.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/0b/49/0b49719cafe46f08439cd664e77a9831cad6c5bd.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1806.04931v1" title="arxiv.org access"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> arxiv.org </button> </a>

Predicting protein-peptide binding sites with a Deep Convolutional Neural Network

Wafaa Wardah, Abdollah Dehzangi, Ghazaleh Taherzadeh, Mahmood A. Rashid, M.G.M. Khan, Tatsuhiko Tsunoda, Alok Sharma
<span title="2020-04-13">2020</span> <i title="Elsevier BV"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/fydada535zbx7el5lxtbdrx6ga" style="color: black;">Journal of Theoretical Biology</a> </i> &nbsp;
To address this problem, we employed a two-stage technique - first, we extracted the relevant features from protein sequences and transformed them into images applying a novel method and then, we applied  ...  a convolutional neural network to identify the peptide binding sites in proteins.  ...  They used Blosum62 for feature preparation [12] and proposed a model inspired by Spectrum RBF string kernel (SRBF) [38] .  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.jtbi.2020.110278">doi:10.1016/j.jtbi.2020.110278</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/32298689">pmid:32298689</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/4lm274sftreuhpbbaxbjaiiequ">fatcat:4lm274sftreuhpbbaxbjaiiequ</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210716203115/https://research-repository.griffith.edu.au/bitstream/handle/10072/396831/Rashid421817-Accepted.pdf;jsessionid=B7F3C9D2327AB8A14E8785F50EBEA436?sequence=2" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/71/22/7122282fe3fb88f77e817af997515b8a71e4c1ed.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.jtbi.2020.110278"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> elsevier.com </button> </a>
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