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Undergraduates Phenotyping Arabidopsis Knockouts in a Course-Based Undergraduate Research Experience: Exploring Plant Fitness and Vigor Using Quantitative Phenotyping Methods †

Courtney J. Murren, Michael J. Wolyniak, Matthew T. Rutter, April M. Bisner, Hilary S. Callahan, Allan E. Strand, Lisa A. Corwin
2019 Journal of Microbiology & Biology Education  
In addition, students' science self-efficacy increased as a result of course participation, and faculty feedback on course implementation was positive.  ...  We present a curriculum description, an initial student outcome investigation, and sample scientific results for a representative Course-Based Undergraduate Research Experience (CURE) that is part of the  ...  This leads to learning regardless of the results of the experiment.  ... 
doi:10.1128/jmbe.v20i2.1650 pmid:31316686 pmcid:PMC6608610 fatcat:ucj46ilaerfypf4c5rqgj62aiy

Supporting exploratory video retrieval tasks with grouping and recommendation

Martin Halvey, David Vallet, David Hannah, Joemon M. Jose
2014 Information Processing & Management  
The results of our evaluations show 1) that the grouping, organisational and recommendation functionalities can result in an improvement in the users' search performance without adversely impacting their  ...  We present two types of recommendation techniques adapted to the grouping search paradigm: the first is a global recommendation, which couples the multi-faceted nature of explorative video retrieval tasks  ...  use of ViGOR; H1.2) that ViGOR can aid user exploration of the task at hand; and H1.3) that the use of ViGOR can also increase user satisfaction with their search and their search results.  ... 
doi:10.1016/j.ipm.2014.06.004 fatcat:3xx5v326d5c5xedts4rwfozxby

Interactive Visual Pattern Search on Graph Data via Graph Representation Learning

Huan Song, Zeng Dai, Panpan Xu, Liu Ren
2021 IEEE Transactions on Visualization and Computer Graphics  
GraphQ provides a visual query interface with a query editor and a multi-scale visualization of the results, as well as a user feedback mechanism for refining the results with additional constraints.  ...  To support fast, interactive queries, we use graph neural networks (GNNs) to encode a graph as fixed-length latent vector representation, and perform subgraph matching in the latent space.  ...  Graphite [13] , Vogue [10] , and Visage [55] support interactive, user-specified queries on graph data and Vigor [54] focuses on visualization of the querying results.  ... 
doi:10.1109/tvcg.2021.3114857 pmid:34587078 fatcat:cjgto243onhstj457w64volpam

Juniper: A Tree+Table Approach to Multivariate Graph Visualization [article]

Carolina Nobre, Marc Streit, Alexander Lex
2018 arXiv   pre-print
The core principle we follow is to selectively query for nodes or subgraphs of interest and visualize these subgraphs as a spanning tree of the graph.  ...  Analyzing large, multivariate graphs is an important problem in many domains, yet such graphs are challenging to visualize.  ...  ACKNOWLEDGMENTS The authors wish to thank members of the Visualization Design Lab for their feedback, and acknowledge support by NIH (U01 CA198935), NSF (IIS 1751238), DoD (ST1605-16-01), and the Austrian  ... 
arXiv:1804.03261v2 fatcat:v6k7jygyprgu7e7bxzsefgpi3a

NEREx: Named-Entity Relationship Exploration in Multi-Party Conversations

Mennatallah El-Assady, Rita Sevastjanova, Bela Gipp, Daniel Keim, Christopher Collins
2017 Computer graphics forum (Print)  
We present NEREx, an interactive visual analytics approach for the exploratory analysis of verbatim conversational transcripts.  ...  Beyond the exploratory and temporal analysis of conversations, NEREx helps users generate and validate hypotheses and perform comparative analyses of multiple conversations.  ...  We developed NEREx, an interactive visual analytics framework for Named-Entity Relationship Exploration.  ... 
doi:10.1111/cgf.13181 fatcat:fcwph6wasrem7oh3c5qi4nsc2i

An asynchronous collaborative search system for online video search

Martin Halvey, David Vallet, David Hannah, Yue Feng, Joemon M. Jose
2010 Information Processing & Management  
In addition the results of this evaluation provide a comparison between implicit and explicit collaboration in the same search system.  ...  collaborative nature of a large number of multimedia tasks.  ...  An even more encouraging result was that the use of ViGOR in collaborative scenarios resulted in users finding more videos and exploring more aspects of the task, in comparison with two users searching  ... 
doi:10.1016/j.ipm.2009.11.007 fatcat:oiwlj3rl3ng6zmbdthg42vldiy

Video browsing interfaces and applications: a review

Klaus Schoeffmann
2010 Journal of Photonics for Energy  
driving forces for the development of more effective solutions to present video contents and allow rich user interaction.  ...  As a result, there are many contemporary research efforts towards developing better video browsing solutions, which are summarized in this paper.  ...  Systems are required which enable users to interactively explore the content of a video in order to get knowledge about its content.  ... 
doi:10.1117/6.0000005 fatcat:xeanz3f6pnaizmtno4mumffhoq

HRGD: a database for mining potential heterosis-related genes in plants

Shuhui Song, Yuefeng Huang, Xuan Wang, Gang Wei, Hongzhu Qu, Weiwei Wang, Xiaomeng Ge, Songnian Hu, Guozhen Liu, Yanchun Liang, Jun Yu
2008 Plant Molecular Biology  
Tools for visualization and functional analysis of DEGs from various hybrid-parent tissue panels are also integrated via a user-friendly web interface.  ...  query and analysis platform for practical data mining.  ...  Foundation of China (30221004), and the National Natural Science Foundation of China (60433020) awarded to YCL.  ... 
doi:10.1007/s11103-008-9421-6 pmid:19011765 fatcat:shhhpa4qrnh7vc2fmdewfy4onu

2018 Index IEEE Transactions on Visualization and Computer Graphics Vol. 24

2019 IEEE Transactions on Visualization and Computer Graphics  
., TVCG Aug. 2018 2284-2297 Inpainting via Two-Stage Low Rank Approximation; TVCG June 2018 2023-2036 Summarization and Stage Analysis of Event Sequence Data; TVCG Jan. 2018 56-65 Guo, Y., see Liu  ...  ., þ, TVCG Jan. 2018 832-842 VIGOR: Interactive Visual Exploration of Graph Query Results.  ...  ., þ, TVCG Feb. 2018 1204-1222 VIGOR: Interactive Visual Exploration of Graph Query Results.  ... 
doi:10.1109/tvcg.2018.2885445 fatcat:xtccdnalwfhudp3qdxofz4kqpi

Ethics, Rules of Engagement, and AI: Neural Narrative Mapping Using Large Transformer Language Models [article]

Philip Feldman, Aaron Dant, David Rosenbluth
2022 arXiv   pre-print
Our results show that our method is able to produce high-quality maps, and demonstrate new ways of evaluating intent more generally.  ...  The resulting "Neural Narrative Maps" (NNMs), are intended to provide insight into the organization of information, opinion, and belief in the model, which in turn provide means to understand intent and  ...  ACKNOWLEDGEMENTS The authors would like to thank the Lockheed-Martin Artificial Intelligence Center (LAIC) for funding a substantial part of the development of the interactive tools for subjective analysis  ... 
arXiv:2202.02647v1 fatcat:zx2jspyoorazbpknb3ikzzltbe

Research review for Korean math pedagogy and computational learning tools

Youngcook Jun
2020 International Journal of Curriculum Development and Practice  
This computer algebra system is designed for the students to enhance their computational thinking skills by exploring algorithms for solving calculus problems, for example.  ...  The second part of this paper deals with several cases of utilizing such tools for computational thinking such as NetLogo and Mathematica.  ...  of results to promote scientific exploration activities.  ... 
doi:10.18993/jcrdaen.22.2_33 fatcat:qoejhukxmneztajq6vqhjwjtja

Querytogether: Enabling entity-centric exploration in multi-device collaborative search

Salvatore Andolina, Khalil Klouche, Tuukka Ruotsalo, Patrik Floréen, Giulio Jacucci
2018 Information Processing & Management  
Similarly, a user interface that allows queries and results to be formulated using entities provides information that can be manipulated in an intuitive way and might be better suited for mediated interaction  ...  of exploration support, collaboration, and engagement.  ...  The funding source had no involvement in the study design, in the collection, analysis and interpretation of the data.  ... 
doi:10.1016/j.ipm.2018.04.005 fatcat:fuilx75grrh2vk4hgzehk7sj5m

Strategic directions in computational geometry

Roberto Tamassia
1996 ACM Computing Surveys  
ACKNOWLEDGMENTS This article represents the efforts of the Computational Geometry Working Group formed as part of the ACM Workshop on Strategic Directions in Computing Research, held at the Massachusetts  ...  Institute of Technology Laboratory for Computer Science, Cambridge, Massachusetts, USA, on June 14-15, 1996.  ...  If the size of the problem is such that the query time exceeds t, we should at least ensure that at time t the query algorithm has produced some useful results, that is, an approximation of the query answer  ... 
doi:10.1145/242223.242248 fatcat:4j4wehrtqjdijed3syxbbdolmi

Impact of detecting clinical trial elements in exploration of COVID-19 literature [article]

Simon Šuster, Karin Verspoor, Timothy Baldwin, Jey Han Lau, Antonio Jimeno Yepes, David Martinez, Yulia Otmakhova
2021 arXiv   pre-print
Although semi-structured information resulting from concept recognition and detection of the defining elements of clinical trials (e.g.  ...  The COVID-19 pandemic has driven ever-greater demand for tools which enable efficient exploration of biomedical literature.  ...  This means that the relational concept selection shown in the visual summary is implicitly filtering a smaller subset of documents from the retrieval results.  ... 
arXiv:2105.12261v1 fatcat:wgbvbl3wzrccfndxbxdsra3h7a

A Framework of Interaction Costs in Information Visualization

H. Lam
2008 IEEE Transactions on Visualization and Computer Graphics  
Interaction cost is an important but poorly understood factor in visualization design. We propose a framework of interaction costs inspired by Norman's Seven Stages of Action to facilitate study.  ...  From 484 papers, we collected 61 interaction-related usability problems reported in 32 user studies and placed them into our framework of seven costs: (1) Decision costs to form goals; (2) System-power  ...  Results of our review suggest a need to focus on interaction costs in visualization evaluations.  ... 
doi:10.1109/tvcg.2008.109 pmid:18988958 fatcat:eaa3zvc45bdyxamzm3lzx5pv6y
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