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UKPMC: a full text article resource for the life sciences

J. R. McEntyre, S. Ananiadou, S. Andrews, W. J. Black, R. Boulderstone, P. Buttery, D. Chaplin, S. Chevuru, N. Cobley, L.-A. Coleman, P. Davey, B. Gupta (+21 others)
2010 Nucleic Acids Research  
UK PubMed Central (UKPMC) is a full-text article database that extends the functionality of the original PubMed Central (PMC) repository.  ...  UKPMC (http:// has undergone considerable development since its inception in 2007 and now includes both a UKPMC and PubMed search, as well as  ...  The mission of UKPMC is to become the information resource of choice for the UK's life science and health research communities.  ... 
doi:10.1093/nar/gkq1063 pmid:21062818 pmcid:PMC3013671 fatcat:vd7npyubyzccpozbgu45sxu7ii

UK PubMed Central: Re-imagining the venerable PubMed Central service for the life science

Ernest Ong Ong
2011 International Journal for Digital Society (IJDS)  
with aspirations to build the premier resource for biomedical and health research.  ...  Launched in 2007, UK PubMed Central (UKPMC) was originally released as a 'mirror' of the US PubMed Central repository.  ...  with the full support of the NCBI, to transform the full text repository into a premier resource and research tool for the biomedical and health research community.  ... 
doi:10.20533/ijds.2040.2570.2011.0068 fatcat:mhitjsy24fb5jj7tqeuido3cku

PubMed Central Canada: Beyond an Open Access Repository?

Rajiv Nariani
2013 The journal of academic librarianship  
UKPMC into a premier resource and research portal for the biomedical and health research community.  ...  of citation data and text-mining-based applications. 10 to not only full-text articles but additionally the abstracts available through PubMed.  ...  APPENDIX A. SUPPLEMENTARY DATA Supplementary data to this article can be found online at http://dx.  ... 
doi:10.1016/j.acalib.2012.11.005 fatcat:3i2wiofolfdabiubbcxa24mqma

The medical journals back-files digitization project and open access

Robert Kiley
2006 Serials: The Journal for the Serials Community  
journals.All content is made freely available through the NIH life sciences repository, PubMed Central (PMC).  ...  This article discusses the medical journals back-files digitization project -an initiative to create a critical mass of digital content based on the back-files of a number of historically significant medical  ...  Thus, a researcher who uses the PubMed database to find articles relevant to the research they are undertaking will be alerted to articles (with links to the full-text article in PMC) irrespective of when  ... 
doi:10.1629/1995 fatcat:guwemfi35bhpbjgizp2xrio3ay

Persistent Identifiers In The Life Sciences

Florian Graef
2017 Zenodo  
Introduction to EMBL-EBI, integration of Persistent Identifiers in the life sciences information services, and the institution's cooperative efforts with project THOR and OpenAIRE.  ...  to identify and locate life science data • Promotes Findable, Accessible, Interoperable and Re-usable (FAIR) data • • Since 2007 (UKPMC) • 30+ million documents of which 4 million full text,  ...  Occasional use for high-level datasets as 2 O PID • ORCIDs • 4.5M articles, 0.5M published authors in Europe PMC • Application to submitted datasets Data collections and identifiers in life sciences •  ... 
doi:10.5281/zenodo.1004728 fatcat:qgvxaed6p5gftaxbc4n57ystcu

2008 BBSRC Tools and Resources Development Fund Application - pubmed2ensembl: a resource for linking biological literature to genome sequences

Casey Bergman, Goran Nenadic
2012 Figshare  
2008 BBSRC Tools and Resources Development Fund application. Awarded.  ...  sequences from full-text articles.  ...  We will investigate harvesting documents via UK PubMed Central (UKPMC) as a complementary strategy that may increase access or coverage of full-text articles.  ... 
doi:10.6084/m9.figshare.94137.v2 fatcat:63oszpocifezhoznpqvjc4nn3i

Measuring the Value and Impact of the Europe PMC Repository [article]

Anoushka Davé, Vivek Seth, Emma Pottinger, Cristina Rosenberg, Xavier Potau, Peter Varnai
2019 Figshare  
The authors conducted surveys and interviews to compile quantitative and qualitative data for calculating a variety of economic values.  ...  This is the final report from the study which measures the value and impact of Europe PMC.  ...  Open access, UK PubMed Central and the Wellcome Trust. J R Soc Med. 2006; 99: 438-439 5 McEntyre JR, Ananiadou S, Andrews S, et al. UKPMC: a full text article resource for the life sciences.  ... 
doi:10.6084/m9.figshare.8326559.v1 fatcat:h3amqlslgbhcrfnepqhvztkkqa

Measuring the Value and Impact of the Europe PMC Repository [article]

Anoushka Davé, Vivek Seth, Emma Pottinger, Cristina Rosenberg, Xavier Potau, Peter Varnai
2019 Figshare  
in Table 2 referring to the number of citations, abstracts, and full-text articles in PubMed.  ...  Additionally, we stated that there were 3 million full-text articles when there are over 5.5 million articles.  ...  Open access, UK PubMed Central and the Wellcome Trust. J R Soc Med. 2006; 99: 438-439 5 McEntyre JR, Ananiadou S, Andrews S, et al. UKPMC: a full text article resource for the life sciences.  ... 
doi:10.6084/m9.figshare.8326559 fatcat:vu7nkpfvdvfmze6uyvqfg3y5dq

When Is Open Access Not Open Access?

Catriona J MacCallum
2007 PLoS Biology  
We don't know yet what innovation means with regards to the full text of an article-who could have predicted the impact GenBank would have or the uses that sequences are now being put to?  ...  and life sciences journal literature, which aims to mirror that created and hosted by the National Institutes of Health in the United States (http:⁄⁄www.pubmedcentral.nih. gov/).  ... 
doi:10.1371/journal.pbio.0050285 pmid:17941723 pmcid:PMC2020500 fatcat:okdjjog4gzhg7efc3ygrh2227i

News and Notes

Teresa Lee
2007 Journal of the Canadian Health Libraries Association  
and life sciences.  ...  Like Google, Microsoft has chosen to use PDF files for the full-text downloads of books.  ... 
doi:10.5596/c07-002 fatcat:462p3g2tz5g5nlvmtznxzl7wna

Europe PMC: a full-text literature database for the life sciences and platform for innovation

2014 Nucleic Acids Research  
This article describes recent developments of Europe PMC (, the leading database for life science literature.  ...  Formerly known as UKPMC, the service was rebranded in November 2012 as Europe PMC to reflect the scope of the funding agencies that support it.  ...  ACKNOWLEDGEMENT We would like to thank the Europe PMC Project and Advisory Boards and the EMBL-EBI Literature Services Advisory Board for strategic guidance on the development of Europe PMC.  ... 
doi:10.1093/nar/gku1061 pmid:25378340 pmcid:PMC4383902 fatcat:7qu3o4r7jfcklmkb7d2el5frbm

Open Content Mining [chapter]

Peter Murray-Rust, Jennifer Molloy, Diane Cabell
2014 Issues in Open Research Data  
Thus, if we expand this case study to find any full-text research article in UKPMC which mentions malaria (and published since 2000) the cohort increases from 2,930 to 15,757.  ...  Copyrights may last for more than a hundred years (life of the author plus 70 years).  ... 
doi:10.5334/ban.b fatcat:6efzsbir4vag3aljrzqrj5yvim

Understanding user behaviour and its metrics

David Brown, Bernard Dumouchel
2007 Information Services and Use  
This is a timely issue for the British Library as it revisits its science, technology and medical strategy to meet its own changing needs as well as the needs of new generations of researchers.  ...  needs of researchers operating on the front lines of science.  ...  Acknowledgements Special thanks to Penny Bunch, Emma Cass, Elisabeth Maître-Allain and to Antoine Raulin for their efforts in organizing the workshop, and to Morgan Wolfe for her contributions to the summary  ... 
doi:10.3233/isu-2007-271-202 fatcat:6iq33njd4zdjpldgaduycu24sq

Europe PMC in 2017

Maria Levchenko, Yuci Gou, Florian Graef, Audrey Hamelers, Zhan Huang, Michele Ide-Smith, Anusha Iyer, Oliver Kilian, Jyothi Katuri, Jee-Hyub Kim, Nikos Marinos, Rakesh Nambiar (+7 others)
2017 Nucleic Acids Research  
Europe PMC ( is a comprehensive resource of biomedical research publications that offers advanced tools for search, retrieval, and interaction with the scientific literature.  ...  Text-mined biological concepts, including database accession numbers and data DOIs, are highlighted in the text and linked to the appropriate data resources.  ...  ACKNOWLEDGEMENTS We would like to thank the Europe PMC and EMBL-EBI Literature Services Advisory Board(s) for strategic guidance on the development of Europe PMC.  ... 
doi:10.1093/nar/gkx1005 pmid:29161421 pmcid:PMC5753258 fatcat:ctbzxc7ufjerbifj35c4w6dj7m

Elsevier's commitment to Universal Access

Federica Rosetta
2014 Septentrio Conference Series  
SMEs to assess their access needs. • This project has now been running for eighteen months and apart from one SME that is affiliated to and provides research to the University of Leiden, full text usage  ...  into a project with the Dutch Government, the Dutch Publishers Association to assess the needs of SMEs in The Netherlands. • This project involved providing full access to ScienceDirect to a set of 12  ... 
doi:10.7557/3044 fatcat:xzd2rlltvvaanjdzeh2tzyabae
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