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Editorial

Somnath Dutta, Tanweer Hussain
2018 Journal of the Indian Institute of Science  
Editorial Knowledge of the three-dimensional structure of cellular macromolecules plays a crucial role in understanding its function.  ...  It is interesting to note that few proteins crystallize in vivo. The review by Banerjee et al. discusses in vivo-grown protein  ...  Editorial Knowledge of the three-dimensional structure of cellular macromolecules plays a crucial role in understanding its function.  ... 
doi:10.1007/s41745-018-0089-x fatcat:mo76mgymgrebdbzeltcce7p4ni

MR of transgenic mice

Youssef Zaim Wadghiri, Joseph A. Helpern
2007 NMR in Biomedicine  
such as confocal microscopy (11) , optical coherence tomography (12, 13) , bioluminescence imaging (14) and optical projection tomography (15, 16) .  ...  Next, Chahboune and co-authors use in vivo diffusion tensor imaging to characterize postnatally the heterogeneous spatiotemporal patterns of brain maturation in the C57B/L6 wild-type mouse strain.  ... 
doi:10.1002/nbm.1178 fatcat:r4lsj4nvdndunifol4vagjwora

Front Matter: Volume 10881

Daniel L. Farkas, James F. Leary, Attila Tárnok
2019 Imaging, Manipulation, and Analysis of Biomolecules, Cells, and Tissues XVII  
using a Base 36 numbering system employing both numerals and letters.  ...  Publication of record for individual papers is online in the SPIE Digital Library. SPIEDigitalLibrary.org Paper Numbering: Proceedings of SPIE follow an e-First publication model.  ...  coated glass substrates for signal enhancement in multiphoton imaging [10881-29] 10881 0V Comparison of two-and three-dimensional nuclear to cytoplasm ratios in analyzing lung cancer cell lines [10881  ... 
doi:10.1117/12.2523412 fatcat:tmpdmi4hzbfbziw3cdicv5cj7m

Three-dimensional structural analysis of eukaryotic flagella/cilia by electron cryo-tomography

Khanh Huy Bui, Gaia Pigino, Takashi Ishikawa
2010 Journal of Synchrotron Radiation  
Electron cryo-tomography is a potential approach to analyzing the threedimensional conformation of frozen hydrated biological macromolecules using electron microscopy.  ...  Since projections of each individual object illuminated from different orientations are merged, electron tomography is capable of structural analysis of such heterogeneous environments as in vivo or with  ...  Tittmann (EMEZ, ETH Zurich) for technical support with the electron microscopy, and T. J. Richmond for the support at the biochemical facility.  ... 
doi:10.1107/s0909049510036812 pmid:21169680 pmcid:PMC3004243 fatcat:wazuij3ghrf3zc5fkdsg2gzhea

Multiscale observation of biological interactions of nanocarriers: From nano to macro

Su-Eon Jin, Jin Woo Bae, Seungpyo Hong
2010 Microscopy research and technique (Print)  
For the micro to macro-scale (in vitro and in vivo) observation, we focus on confocal laser scanning microscopy (CLSM) as well as in vivo imaging systems such as magnetic resonance imaging (MRI), superconducting  ...  This review describes how to address the physicochemical and biological interactions of nanocarriers within the biological environments using microscopic tools.  ...  Acknowledgments This work was partially supported by National Science Foundation (NSF), under grant # CBET-0931472 and was conducted in a facility constructed with support from grant C06RR15482 from the  ... 
doi:10.1002/jemt.20847 pmid:20232368 pmcid:PMC2930031 fatcat:wegwhmcfmbbufmqjgenfcsuvgi

New frontiers in the three-dimensional visualization of plant structure and function

C. R. Brodersen, A. B. Roddy
2016 American Journal of Botany  
Using traditional serial sectioning and light microscopy, the optical shuttle method exposes each serial section onto subsequent frames of motion picture fi lm, thereby assigning the axial position of  ...  Nuclear magnetic resonance (NMR) imaging is gaining popularity for the study of plant vascular function, and plantspecifi c facilities have emerged to meet the growing demand (e.g., Wageningen NMR Centre  ...  vivo.  ... 
doi:10.3732/ajb.1500532 pmid:26865119 fatcat:yga7km42a5bdbnux7n4jt44x4i

Proteins bioassay: recent scenario for new target validations
English

Pawar SV, Chate PB, Kayarkar NA, Durgude SG, Maurya BD, Gomase VS
2009 International Journal of Genetics  
This article reviews different aspects of protein engineering technologies such as protein screening, NMR, EM & x-ray crystallography, In silico protein structure, protein cell free technologies, protein  ...  chips and arrays, custom peptide synthesis as well as nanoscale / microscale separation or purification methods briefly and where they are being used to solve protein queries.  ...  ; electron microscopy and electron tomography.  ... 
doi:10.9735/0975-2862.1.2.10-16 fatcat:vdaoiw6d2nhtdlqgnlqmehazga

A structural perspective on protein?protein interactions

R RUSSELL
2004 Current Opinion in Structural Biology  
They can be solved by experimental methods, such as X-ray crystallography, NMR spectroscopy and electron microscopy, as well as by computational protein structure prediction, docking and bioinformatics  ...  Structures of macromolecular complexes are necessary for a mechanistic description of biochemical and cellular processes.  ...  A set of projection images is then recorded and used to build a three-dimensional model.  ... 
doi:10.1016/s0959-440x(04)00073-9 fatcat:2gwcw5x3b5hhhnegqhkpp4wvq4

A structural perspective on protein–protein interactions

Robert B Russell, Frank Alber, Patrick Aloy, Fred P Davis, Dmitry Korkin, Matthieu Pichaud, Maya Topf, Andrej Sali
2004 Current Opinion in Structural Biology  
They can be solved by experimental methods, such as X-ray crystallography, NMR spectroscopy and electron microscopy, as well as by computational protein structure prediction, docking and bioinformatics  ...  Structures of macromolecular complexes are necessary for a mechanistic description of biochemical and cellular processes.  ...  A set of projection images is then recorded and used to build a three-dimensional model.  ... 
doi:10.1016/j.sbi.2004.04.006 pmid:15193311 fatcat:a7vago7coza3boddj5swcs7uxm

Elements of Scientific Visualization in Basic Neuroscience Research

BENEDICT C. ALBENSI, ERIN V. ILKANICH, GABRIELE DINI, DAMIR JANIGRO
2004 BioScience  
Comparison of in vivo imaging techniques.fMRI, functional magnetic resonance imaging; MRI, magnetic resonance imaging; PET, positron emission tomography; SPECT, single-photon emission computer tomography  ...  imaging (through the time-sequence presentation of three-dimensional data; Emptage 2001) .  ... 
doi:10.1641/0006-3568(2004)054[1127:eosvib]2.0.co;2 fatcat:zt7r4h4qlnan7iba3dkhrxnenu

Neurotransplantation of magnetically labeled oligodendrocyte progenitors: Magnetic resonance tracking of cell migration and myelination

J. W. M. Bulte, S.-C. Zhang, P. van Gelderen, V. Herynek, E. K. Jordan, I. D. Duncan, J. A. Frank
1999 Proceedings of the National Academy of Sciences of the United States of America  
Cell migration could be easily detected by using three-dimensional magnetic resonance microscopy, with a close correlation between the areas of contrast enhancement and the achieved extent of myelination  ...  The migratory capacity of transplanted cells is of key importance in determining the extent of (re)myelination and can, at present, be evaluated only by using invasive and irreversible procedures.  ...  Three-dimensional multigradient echo MR images were obtained at 52-or 78-m isotropic resolution by using a 4.7 T Varian INOVA NMR spectrometer and a 6-mm diameter Bruker saddle coil.  ... 
doi:10.1073/pnas.96.26.15256 pmid:10611372 pmcid:PMC24807 fatcat:zhj2mdzeg5b3hi4l2yt7ehttb4

Tracking immune cells in vivo using magnetic resonance imaging

Eric T. Ahrens, Jeff W. M. Bulte
2013 Nature reviews. Immunology  
The increasing complexity of in vivo imaging technologies, coupled with the development of cell therapies, has fuelled a revolution in immune cell tracking in vivo.  ...  These recent uses show that MRI has the potential to be developed in many applications to follow the fate of immune cells in vivo.  ...  Acknowledgments The authors are supported by US National Institutes of Health grants R01-CA134633, P41-EB0019772, R01-NS045062, R01-EB007825, R01-DA026299 and U54-CA151838, the Maryland Stem Cell Research  ... 
doi:10.1038/nri3531 pmid:24013185 pmcid:PMC3886235 fatcat:p5d2elwpuvgzdkfmc2ztmsz77i

Taking a deep look: modern microscopy technologies to optimize the design and functionality of biocompatible scaffolds for tissue engineering in regenerative medicine

M. Vielreicher, S. Schurmann, R. Detsch, M. A. Schmidt, A. Buttgereit, A. Boccaccini, O. Friedrich
2013 Journal of the Royal Society Interface  
Cellular AF imaging using 2-PF is frequently used in TE studies.  ...  (I) In vivo OCT scan of a human retina using 800 nm illumination light.  ... 
doi:10.1098/rsif.2013.0263 pmid:23864499 pmcid:PMC3730680 fatcat:ratm2lr2jvblplyetxk7ehjdu4

Transcriptional control of cell fate in the stomatal lineage

Abigail R Simmons, Dominique C Bergmann
2016 Current opinion in plant biology  
Recent advances in image acquisition and computational analysis are now enabling development to be visualized and quantified in its entirety at the cellular level.  ...  Further technical advances in imaging and image analysis will enable this approach to be applied to a greater diversity of plant organs and will become a key tool to address many questions in plant development  ...  Acknowledgements We thank Petra Stamm for the images used in Figure 1 .  ... 
doi:10.1016/j.pbi.2015.09.008 pmid:26550955 pmcid:PMC4753106 fatcat:jgtsrs4vbvfnnnjwv7sbl3a5m4

Label-Free, Longitudinal Visualization of PDT ResponseIn Vitrowith Optical Coherence Tomography

Yookyung Jung, Alexander J. Nichols, Oliver J. Klein, Emmanuel Roussakis, Conor L. Evans
2012 Israel Journal of Chemistry  
Optical coherence tomography (OCT) is an ideal method for the long-term, non-perturbative study of in vitro models and their response to PDT.  ...  A major challenge in creating and optimizing therapeutics in the fight against cancer is visualizing and understanding the microscale spatiotemporal treatment response dynamics that occur in patients.  ...  Imran Rizvi, and Professor Jon Celli for their guidance and assistance in the collection of some of the data presented in this review.  ... 
doi:10.1002/ijch.201200009 pmid:23316088 pmcid:PMC3538822 fatcat:q3ibqjo3xrgghhzjmqcypjqmkm
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