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The role of analogy in ontology alignment: A study on LISA

Elie Raad, Joerg Evermann
2015 Cognitive Systems Research  
We apply the LISA system, a cognitively-based model of human analogical reasoning, to ontology alignment and present a comprehensive experimental study to determine its performance on ontology alignment  ...  We investigate the question whether ontology alignment is rooted in the same cognitive process as analogical reasoning.  ...  Analogies are at the core of human cognition (Gust et al., 2008; Gick and Holyoak, 1980; Gentner and Forbus, 2011) and are a promising field of research in cognitive science (Forbus et al., 1998) .  ... 
doi:10.1016/j.cogsys.2014.09.001 fatcat:25kwqtsyibg25onxv4iiwxgthu

Is ontology alignment like analogy?

Elie Raad, Joerg Evermann
2014 Proceedings of the 29th Annual ACM Symposium on Applied Computing - SAC '14  
Their integration requires ontology alignment, a determination of which concepts in a source ontology are like concepts in a target ontology.  ...  This paper presents a novel approach to this problem by applying analogical reasoning, an area of cognitive science that has seen much recent work, to the ontology alignment problem.  ...  One analog plays the role of driver, the other that of receiver. Figure 2 shows an example of the analogy-making process of LISA between a driver and a recipient analog.  ... 
doi:10.1145/2554850.2554853 dblp:conf/sac/RaadE14 fatcat:gtpmbzxpovaqxanghq556t44du

Lagrangian Relaxation Applied to Sparse Global Network Alignment [chapter]

Mohammed El-Kebir, Jaap Heringa, Gunnar W. Klau
2011 Lecture Notes in Computer Science  
In an extensive computational study on protein interaction networks for six different species, we find that our new method outperforms alternative state-of-the-art methods with respect to quality and running  ...  This holds in particular for the field of comparative network analysis, where one wants to identify commonalities between biological networks.  ...  We thank SARA Computing and Networking Services (www.sara.nl) for their support in using the Lisa Compute Cluster.  ... 
doi:10.1007/978-3-642-24855-9_20 fatcat:s3yk3llmjfdt5blbgrdjwa7mgu

Lagrangian Relaxation Applied to Sparse Global Network Alignment [article]

Mohammed El-Kebir and Jaap Heringa and Gunnar W. Klau
2011 arXiv   pre-print
In an extensive computational study on protein interaction networks for six different species, we find that our new method outperforms alternative state-of-the-art methods with respect to quality and running  ...  This holds in particular for the field of comparative network analysis, where one wants to identify commonalities between biological networks.  ...  We thank SARA Computing and Networking Services (www.sara. nl) for their support in using the Lisa Compute Cluster.  ... 
arXiv:1108.4358v1 fatcat:3nrbagorkrhn5ipkubhilacrda

Natalie 2.0: Sparse Global Network Alignment as a Special Case of Quadratic Assignment

Mohammed El-Kebir, Jaap Heringa, Gunnar Klau
2015 Algorithms  
We focus on sparse network alignment, where each node can be mapped only to a typically small subset of nodes in the other network.  ...  We exploit that network alignment is a special case of the well-studied quadratic assignment problem (QAP).  ...  Acknowledgments We thank SARA Computing and Networking Services for their support in using the Lisa Compute Cluster.  ... 
doi:10.3390/a8041035 fatcat:awplxc76vvbebbmjlxamjc5lm4

The post-genomic era of biological network alignment

Fazle E Faisal, Lei Meng, Joseph Crawford, Tijana Milenković
2015 EURASIP Journal on Bioinformatics and Systems Biology  
Then, network alignment can guide the transfer of biological knowledge from well-studied model species to less well-studied species between conserved (aligned) network regions, thus complementing valuable  ...  We discuss recent innovative efforts of improving the existing view of network alignment.  ...  Acknowledgements This work has been supported by the National Science Foundation CAREER CCF-1452795 and CCF-1319469 grants.  ... 
doi:10.1186/s13637-015-0022-9 pmid:28194172 pmcid:PMC5270500 fatcat:3mee3vqx3zew7fslxmuqernft4

Page 3154 of Psychological Abstracts Vol. 91, Issue 9 [page]

2004 Psychological Abstracts  
We simulated the impact of relational complexity on response time using Learning and Inference with Schemas and Analogies (LISA), a computational model of relational comparisons based on dynamic binding  ...  of elements into roles in a relational working memory.  ... 

Towards a Modular Ontology for Space Weather Research [article]

Cogan Shimizu, Ryan McGranaghan, Aaron Eberhart, Adam C. Kellerman
2020 arXiv   pre-print
As such, we have developed a modular ontology to drive the core of the data integration and serve the needs of a highly interdisciplinary community.  ...  This paper presents our preliminary modular ontology, for space weather research, as well as demonstrate a method for adaptation to a particular use-case, through the use of existential rules and explicit  ...  The authors acknowledge partial support from the National Science Foundation under Grant Numbers 1936677 and 1937152, as well as thorough discussion with Sean Gordon, Lisa Kerr, and Philip Murphy.  ... 
arXiv:2009.12285v2 fatcat:7sfx42pzmvcpnc5og5hblzsyvu

Towards analogy-based reasoning in semantic network

Milos Stojkovic, Milan Trifunovic, Dragan Misic, Miodrag Manic
2015 Computer Science and Information Systems  
ASM responds to unpredicted input by upgrading new association plexus modeled on remainder of the context whose subset is recognized as topologically analogous association plexus.  ...  In this paper an approach in realization of analogy-based reasoning in semantic networks is presented. New semantic model, called Active Semantic Model (ASM), was used.  ...  The paper represents a summary about a part of the research that is conducted within the project -Virtual human osteoarticular system and its application in preclinical and clinical practice‖ (project  ... 
doi:10.2298/csis141103036s fatcat:seyo2fwsyzepna3pwvsbuercsm

Visuospatial Re-Representation in Analogical Reasoning

Jim Davies, Ashok K. Goel
2008 Open Artificial Intelligence Journal  
We present a computational theory of analogy in which visuospatial re-representation enables analogical transfer in cases where there are ontological mismatches in the non-visuospatial representation.  ...  Visual and spatial representations seem to play a significant role in analogy.  ...  Psychological studies show that analogs are retrieved from memory based on surface similarity of the target analog to the retrieved source [22] .  ... 
doi:10.2174/1874061800802010011 fatcat:lnj4vae2hjaalioipnabhhbatm

Can Ontologies Systematically Help in the Design of Domain-Specific Visual Languages? [chapter]

Maria das Graças da Silva Teixeira, Ricardo de Almeida Falbo, Giancarlo Guizzardi
2013 Lecture Notes in Computer Science  
We contrast a generic notation (UMLbased notation for object diagrams) and a domain specific notation that was designed based on a well-founded ontology for the domain of organizational structures.  ...  Since a well-founded domain ontology aims at faithfully representing a domain, it can be seen the ideal input for engineering a DSVL.  ...  This research is funded by the Brazilian Research Funding Agencies FAPES (Process Number 52272362/11) and CNPq (Process Number #311578/2011-0) . We thank also to the participants of the experiment.  ... 
doi:10.1007/978-3-642-41030-7_54 fatcat:n2kmlq6r7bflnjlyuxpqwkedmm

A symbolic-connectionist theory of relational inference and generalization

John E. Hummel, Keith J. Holyoak
2003 Psychological review  
The authors present a specific instantiation of their theory in the form of a computer simulation model, Learning and Inference with Schemas and Analogies (LISA).  ...  Their proposal is a form of symbolic connectionism: a connectionist system based on distributed representations of concept meanings, using temporal synchrony to bind fillers and roles into relational structures  ...  In its current state, LISA could capture these distinctions using higher level propositions that specify the ontological status of their arguments.  ... 
doi:10.1037/0033-295x.110.2.220 pmid:12747523 fatcat:oaryjw6wsfd2zfdc5thsxm4f5i

Timbre of Trash

Joe Cantrell
2020 Journal of the Austrian Association for American Studies  
The idea of obsolescence plays a key role in this process, as more recent commodities replace older, presumably less-effective products.  ...  The electronic audio practices of American sonic artists who incorporate obsolete, broken, and discarded objects in their work will act as case studies for this exploration.  ...  This is not to say that humans do not have a significant part to play in the physical world, but the role they do play should allow for a conception of the human body as but one site in a constant co-construction  ... 
doi:10.47060/jaaas.v1i2.116 fatcat:lw2uoxthlbcmzjpiymu3l75iie

The OceanLink project

Tom Narock, Robert Arko, Suzanne Carbotte, Adila Krisnadhi, Pascal Hitzler, Michelle Cheatham, Adam Shepherd, Cynthia Chandler, Lisa Raymond, Peter Wiebe, Timothy Finin
2014 2014 IEEE International Conference on Big Data (Big Data)  
OceanLink is an online platform that addresses scholarly discovery and collaboration in the ocean sciences.  ...  Today's scientific investigations are producing large numbers of scholarly products.  ...  From these results we can see that Peter Wiebe had the role Chief Scientist on a number of oceanographic research cruises.  ... 
doi:10.1109/bigdata.2014.7004347 dblp:conf/bigdataconf/NarockACKHCSCRWF14 fatcat:wpzdh44fxfexzpi6wpwqcegh3i

How to Blend Concepts and Influence People: Computational Models of Conceptual Integration

Tony Veale
2007 Theoria et Historia Scientiarum  
) and French (1995) is a non-deterministic study of the role of similarity and analogy in high-level perception.  ...  Tabletop is an environment for studying the pragmatically shifting nature of similarity judgements that one experiences during the analysis of 'do as I do analogies', in which a student attempts to replicate  ... 
doi:10.12775/ths.2002.016 fatcat:ybfmmiltxbcxlfbnpbfadtknly
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