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The MultiCluster Model to the Integrated Use of Multiple Workstation Clusters [chapter]

Marcos Barreto, Rafael Ávila, Philippe Navaux
2000 Lecture Notes in Computer Science  
In this paper we present an analysis on several aspects concerning the integration of different workstation clusters, such as Myrinet and SCI, and propose our MultiCluster model as an alternative to achieve  ...  One of the new research tendencies within the well-established cluster computing area is the growing interest in the use of multiple workstation clusters as a single virtual parallel machine, in much the  ...  The integration of multiple workstation clusters presents a similar problem.  ... 
doi:10.1007/3-540-45591-4_8 fatcat:ufcmeh44ijdg3nalgktkn5zggq

Bridging the Gap Between Cluster and Grid Computing [chapter]

Albano Alves, António Pina
2006 Lecture Notes in Computer Science  
Ro c meµ is a platform originally designed to support the operation of multi-SAN clusters that integrates application modeling and resource allocation.  ...  In this paper we show how the underlying resource oriented computation model provides the necessary abstractions to accommodate the migration from cluster to multicluster grid enabled computing.  ...  Ro c meµ, as an overall platform, is well suited to the development of applications aimed to exploit multi-SAN clusters that integrate multiple communication technologies such as Myrinet and Gigabit.  ... 
doi:10.1007/11752578_25 fatcat:z7sixbkmovfg5lpcfdbd6chjui

Steady-State Throughput and Scheduling Analysis of Multicluster Tools: A Decomposition Approach

Jingang Yi, Shengwei Ding, Dezhen Song, M.T. Zhang
2008 IEEE Transactions on Automation Science and Engineering  
Note to Practitioners-Modeling and scheduling of cluster tools are critical to improving the productivity and to enhancing the design of wafer processing flows and equipment for semiconductor manufacturing  ...  A chemical vapor deposition tool is used as an example of multicluster tools to illustrate the decomposition method and algorithms.  ...  ACKNOWLEDGMENT The authors thank the Associate Editor and three anonymous reviewers for their constructive feedback and suggestions. They are also grateful to Prof. W.-K.  ... 
doi:10.1109/tase.2007.906678 fatcat:kzwzvlqbojdrxaqd7himas47je

Cluster abstraction: towards uniform resource description and access in multicluster grid

Maoyuan Xie, Zhifeng Yun, Zhou Lei, Gabrielle Allen
2007 Second International Multi-Symposiums on Computer and Computational Sciences (IMSCCS 2007)  
This deployment service is one of the essential components in ongoing resource management development for multicluster Grids.  ...  for use.  ...  It is of significance to provide cluster abstraction and integration on multicluster environment, which greatly improves resource utilization with easy-to-use access.  ... 
doi:10.1109/imsccs.2007.79 dblp:conf/imsccs/XieYLA07 fatcat:u7yyktrj5jamlikotmq5ets56a

Cluster Abstraction: Towards Uniform Resource Description andAccess in Multicluster Grid

Maoyuan Xie, Zhifeng Yun, Zhou Lei, Gabrielle Allen
2007 Second International Multi-Symposiums on Computer and Computational Sciences (IMSCCS 2007)  
This deployment service is one of the essential components in ongoing resource management development for multicluster Grids.  ...  for use.  ...  It is of significance to provide cluster abstraction and integration on multicluster environment, which greatly improves resource utilization with easy-to-use access.  ... 
doi:10.1109/imsccs.2007.4392605 fatcat:fj346rywwnd7pmmi7rnj2ao27m

Scheduling Strategies for Cycle Scavenging in Multicluster Grid Systems

Ozan Sonmez, Bart Grundeken, Hashim Mohamed, Alexandru Iosup, Dick Epema
2009 2009 9th IEEE/ACM International Symposium on Cluster Computing and the Grid  
The use of today's multicluster grids exhibits periods of submission bursts with periods of normal use and even of idleness.  ...  However, observational scheduling leads to resource contention when several such users crowd the same idle cluster.  ...  Science (OC&W), and which is the part of the ICT innovation program of the Dutch Ministry of Economic Affairs.  ... 
doi:10.1109/ccgrid.2009.46 dblp:conf/ccgrid/SonmezGMIE09 fatcat:4tf7mevvkjcqzc6vteywcvqm6i

Allocating non-real-time and soft real-time jobs in multiclusters

L. He, S.A. Jarvis, D.P. Spooner, H. Jiang, D.N. Dillenberger, G.R. Nudd
2006 IEEE Transactions on Parallel and Distributed Systems  
the performance of job scheduling in multiclusters, both in terms of the mean response time (for non-real-time jobs) and the mean miss rate (for soft real-time jobs).  ...  The ORT strategy achieves an optimized mean response time for non-real-time jobs, while the OMR strategy obtains an optimized mean miss rate for soft real-time jobs over multiple clusters.  ...  A multicluster model is presented in [5] , for example, that integrates different workstation clusters into a virtual parallel machine.  ... 
doi:10.1109/tpds.2006.18 fatcat:qhbyjgydrjdlxo7qpkw55s4gia

Dynamic Parallel Job Scheduling in Multi-cluster Computing Systems [chapter]

J. H. Abawajy
2004 Lecture Notes in Computer Science  
Job scheduling is a complex problem, yet it is fundamental to sustaining and improving the performance of parallel processing systems.  ...  In this paper, we address an on-line parallel job scheduling problem in heterogeneous multi-cluster computing systems.  ...  The help of Maliha Omar is also greatly appreciated.  ... 
doi:10.1007/978-3-540-24685-5_4 fatcat:53foztfkibalzd7skmvdyvsdja

Parallel Implementations of Local Sequence Alignment: Hardware and Software [chapter]

Vipin Chaudhary, Feng Liu, Vijay Matta, Laurence T. Yang
2005 Parallel Computing for Bioinformatics and Computational Biology  
Similar time to solution can be obtained using the SGI modified MULTICLUSTAL on smaller number of CPUs compared to the original MULTICLUSTAL, thereby freeing additional computer resources without a performance  ...  The algorithm searches for the best combination of ClustalW input parameters in order to produce more meaningful multiple sequence alignments (i.e. smaller number of gaps with more clustering).  ... 
doi:10.1002/0471756504.ch10 fatcat:fdfhvtgrpfdslpkvpl4fzyybey

Heterogeneous parallel computing: from clusters of workstations to hierarchical hybrid platforms

2014 Supercomputing Frontiers and Innovations  
It covers both traditional approaches originally designed for clusters of heterogeneous workstations and the most recent methods developed in the context of modern multicore and multi-accelerator heterogeneous  ...  The paper overviews the state of the art in design and implementation of data parallel scientific applications on heterogeneous platforms.  ...  (uniprocessor) workstations to modern hierarchical clusters of heterogeneous hybrid nodes.  ... 
doi:10.14529/jsfi140304 fatcat:f4u6c4zupjhvlg5c666shbxto4

Power-aware microarchitecture: design and modeling challenges for next-generation microprocessors

P.W. Cook, M. Gupta, V. Zyuban, J. Wellman, A. Buyuktosunoglu, P.N. Kudva, H. Jacobson, S.E. Schuster, P. Bose, D.M. Brooks
2000 IEEE Micro  
To circumvent the simulator speed limitations, we used a parallel workstation cluster (farm).  ...  We consider validation to be an integrated part of the methodology. Our focus is on building models that rate highly for relative accuracy.  ...  Such models will enable designers to make the right choices in defining the future generation of energy-efficient microprocessors. MICRO  ... 
doi:10.1109/40.888701 fatcat:ppinuavlsjf2bouizu2yhbmonm

Inferences of Transcriptional and Translational Regulatory Modules for Systems Biology: A Review

Suhas A. Bhyratae
2018 International Journal for Research in Applied Science and Engineering Technology  
to predict the structure of proteins, to forecast the functions of newly discovered proteins, to cluster and classify proteins into families and to align similar proteins etc. computational biology driven  ...  The recent explosion in the amount of available biological data, 2. Commercial incentive to exploit the available biological data for drug discovery and other developments.  ...  workstations.  ... 
doi:10.22214/ijraset.2018.7076 fatcat:w4i2ahcx2fay7ebatpu2hyab3m

A Survey of Multiple Sequence Alignment Parallel Tools

MohammedW. Aly, NaglaaM. Reda, KasimA. Alsalem, FayedF.M. Ghaleb
2016 International Journal of Advanced Research  
The technique they use for obtaining high performance is to parallelize the task to be run simultaneously by multiple vector execution units with SIMD and by multiple processors with MIMD.  ...  The last ten years have witnessed a big improvement to existing multiple alignment tools and the development of new ones.  ...  The algorithm has been implemented on a cluster of workstation on 16 node using MPI library.  ... 
doi:10.21474/ijar01/382 fatcat:lrxb5u5mkfcsthnrwfrxcfly6a

Hierarchical Cluster Assignment for Coarse-Grain Reconfigurable Coprocessors

Martino Sykora, Davide Pavoni, Joel Cambonie, Roberto Costa, Stefano Crespi Reghizzi
2007 2007 IEEE International Parallel and Distributed Processing Symposium  
Clustered architectures are a solution designed to exploit the high Instruction Level Parallelism (ILP) of the media kernels, to keep a good level of scalability and to match the strict constraints of  ...  The enhanced flexibility allows them to handle several different data-paths effectively, hence multiple applications; this is a key economic factor in the semiconductor world, in which the cost of the  ...  We will use that indexes in the following, in order to refer to the input data of each sub-problem.  ... 
doi:10.1109/ipdps.2007.370381 dblp:conf/ipps/SykoraPCCC07 fatcat:l5bhze6gqjdy3k42ibe5kymflq

Toward an on demand service-oriented architecture

C. H. Crawford, G. P. Bate, L. Cherbakov, K. Holley, C. Tsocanos
2005 IBM Systems Journal  
It is also about the integration of multiple technologies, which when taken in isolation provide some value, but which when used holistically provide far more significant payback to the enter- prise.  ...  Dan, “eModel: Addressing the Need for a Flexible Modeling Framework in Autonomic Computing,” Proceedings of the 10th International Workshop on Modeling, Analysis, and Simulation of Computer and Telecommunication  ... 
doi:10.1147/sj.441.0081 fatcat:o7tswknk2zbylhrjbkzcgzl2qq
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