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The Mouse Genome Database (MGD): integrating biology with the genome
2004
Nucleic Acids Research
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The Mouse Genome Database (MGD) is one component of the Mouse Genome Informatics (MGI) system (http://www.informatics.jax.org), a community database resource for the laboratory mouse. ...
MGD strives to provide a comprehensive knowledgebase about the mouse with experiments and data annotated from both literature and online sources. ...
ACKNOWLEDGEMENTS MGD is supported by NIH/NHGRI grant HG00330. ...
doi:10.1093/nar/gkh125
pmid:14681461
pmcid:PMC308859
fatcat:uprwazyvfndahp6bojvp5rxqo4
MGD: the Mouse Genome Database
2003
Nucleic Acids Research
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The Mouse Genome Database (MGD) (http://www. informatics.jax.org) one component of a community database resource for the laboratory mouse, a key model organism for interpreting the human genome and for ...
MGD collaborates with other bioinformatics groups to curate a definitive set of information about the laboratory mouse. ...
ACKNOWLEDGEMENTS MGD is supported by NIH/NHGRI grant HG00330. GO development and annotation efforts for MGI are supported by NIH/NHGRI grant HG02273. ...
doi:10.1093/nar/gkg047
pmid:12519980
pmcid:PMC165494
fatcat:m2a3h2f4ubah7hmqaqbuklqpbi
The Mouse Genome Database (MGD): updates and enhancements
2006
Nucleic Acids Research
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The Mouse Genome Database (MGD) integrates genetic and genomic data for the mouse in order to facilitate the use of the mouse as a model system for understanding human biology and disease processes. ...
A core component of the MGD effort is the acquisition and integration of genomic, genetic, functional and phenotypic information about mouse genes and gene products. ...
ACKNOWLEDGEMENTS The Mouse Genome Database is supported by NIH/ NHGRI grant HG00330. Funding to pay the Open Access publication charges for this article was provided by NHGRI P41-00330. ...
doi:10.1093/nar/gkj085
pmid:16381933
pmcid:PMC1347448
fatcat:xls3y2e44nevzpfc3bul6tyohy
The Mouse Genome Database (MGD): mouse biology and model systems
2007
Nucleic Acids Research
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The Mouse Genome Database, (MGD, http:// www.informatics.jax.org/), integrates genetic, genomic and phenotypic information about the laboratory mouse, a primary animal model for studying human biology ...
Recent improvements in MGD described here include the association of gene trap data with mouse genes and a new batch query capability for customized data access and retrieval. ...
ACKNOWLEDGEMENTS The Mouse Genome Database is supported by NIH/ NHGRI grant HG000330. Funding to pay the Open Access publication charges for this article was provided by HG000330. ...
doi:10.1093/nar/gkm961
pmid:18158299
pmcid:PMC2238849
fatcat:pmebitz5ura4pmusobr7cfxbuy
Integrating computationally assembled mouse transcript sequences with the Mouse Genome Informatics (MGI) database
2003
Genome Biology
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The utility of such databases is enhanced when the sequences they contain are integrated with such biological information as genomic location, gene function, gene expression and phenotypic variation. ...
We present the analysis and results of a semi-automated process of connecting transcript assemblies with highly curated biological information for mouse genes that is available through the Mouse Genome ...
The comments of Martin Ringwald, Molly Bogue, and Dong (Donnie) Qi helped to improve the clarity of the manuscript. ...
doi:10.1186/gb-2003-4-2-r16
fatcat:k43kned745czjfmzgb54vnc22y
Integrating computationally assembled mouse transcript sequences with the Mouse Genome Informatics (MGI) database
2003
Genome Biology
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The utility of such databases is enhanced when the sequences they contain are integrated with such biological information as genomic location, gene function, gene expression and phenotypic variation. ...
We present the analysis and results of a semi-automated process of connecting transcript assemblies with highly curated biological information for mouse genes that is available through the Mouse Genome ...
The comments of Martin Ringwald, Molly Bogue, and Dong (Donnie) Qi helped to improve the clarity of the manuscript. ...
pmid:12620126
pmcid:PMC151306
fatcat:etkzkochhzg4hi6b32vdvyptpy
Mouse Genome Database (MGD)-2018: knowledgebase for the laboratory mouse
2017
Nucleic Acids Research
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The Mouse Genome Database (MGD; http://www. informatics.jax.org) is the key community mouse database which supports basic, translational and computational research by providing integrated data on the genetics ...
, genomics, and biology of the laboratory mouse. ...
ACKNOWLEDGEMENTS We are grateful to our collaborators at Disease Ontology (DO) and Rat Genome Database (RGD) for providing updated disease ontology files and help with revisions and additions to the ontology ...
doi:10.1093/nar/gkx1006
pmid:29092072
pmcid:PMC5753350
fatcat:vvlq4zpe4jac7ik25sh26qrulq
The Mouse Genome Database (MGD): the model organism database for the laboratory mouse
2002
Nucleic Acids Research
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The Mouse Genome Database (MGD) is the community database resource for the laboratory mouse, a key model organism for interpreting the human genome and for understanding human biology and disease (http ...
MGD strives to provide a highly curated, highly integrated information resource that not only includes the consensus view of current knowledge about the mouse, but also provides comparative genomic information ...
ACKNOWLEDGEMENTS MGD is supported by NIH/NHGRI grant HG00330. GO development and annotation efforts for MGI are supported by NIH/NHGRI grant HG02273. ...
doi:10.1093/nar/30.1.113
pmid:11752269
pmcid:PMC99116
fatcat:bhiq5oc2lvct7pfw32picmq2xq
The Mouse Genome Database (MGD): integration nexus for the laboratory mouse
2001
Nucleic Acids Research
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The Mouse Genome Database (MGD) is the community database resource for the laboratory mouse, a key model organism for interpreting the human genome and for understanding human biology and disease (http ...
This link between the genome and the biology of the mouse is especially important as phenotype information grows from large mutagenesis projects and genotype information grows from large-scale sequencing ...
ACKNOWLEDGEMENTS The Mouse Genome Database is supported by NIH grant HG00330. The MouseBLAST is supported by NIH:HG01559 and DOE:DE-FG02-99ER62850. ...
doi:10.1093/nar/29.1.91
pmid:11125058
pmcid:PMC29788
fatcat:tehxcnxurzaltlsmbtsbgkdfzq
The Mouse Genome Database (MGD): genetic and genomic information about the laboratory mouse
1999
Nucleic Acids Research
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The Mouse Genome Database (MGD) focuses on the integration of mapping, homology, polymorphism and molecular data about the laboratory mouse. ...
MGD is accessible at http://www.informatics.jax.org + The Mouse Genome Database Group: ...
The MGI web site provides integrated access to various information resources on the genetics and biology of the laboratory mouse, including the MGD, GXD (4), the Mouse Tumor Database (MTB) (5) and the ...
doi:10.1093/nar/27.1.95
pmid:9847150
pmcid:PMC148105
fatcat:cdtowpch3rfpvlfa2qkirwhftm
The Mouse Genome Database (MGD): expanding genetic and genomic resources for the laboratory mouse
2000
Nucleic Acids Research
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The Mouse Genome Database (MGD) is a comprehensive public database of mouse genomic, genetic and phenotypic information (http://www.informatics.jax.org ). ...
MGD scientists and annotators work cooperatively with the research community to provide an integrated, consensus view of the mouse genome while also providing experimental data including data conflicting ...
Other projects include the Gene Expression Database (GXD) (2) and the Mouse Tumor Biology (MTB) (3) database. ...
doi:10.1093/nar/28.1.108
pmid:10592195
pmcid:PMC102449
fatcat:ktxj23y7izcjxprc5733y4lvve
Mouse Genome Database (MGD)-2017: community knowledge resource for the laboratory mouse
2016
Nucleic Acids Research
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The Mouse Genome Database (MGD: http://www. informatics.jax.org) is the primary community data resource for the laboratory mouse. ...
It provides a highly integrated and highly curated system offering a comprehensive view of current knowledge about mouse genes, genetic markers and genomic features as well as the associations of those ...
ACKNOWLEDGEMENTS The authors thank David Shaw for his contributions and leadership in providing User Support services to the community of scientists who use MGD and all MGI data resources. ...
doi:10.1093/nar/gkw1040
pmid:27899570
pmcid:PMC5210536
fatcat:t7apqsxrl5h7zbjn4bo47zejhu
The Mouse Genome Database (MGD): from genes to mice--a community resource for mouse biology
2004
Nucleic Acids Research
Preserved Fulltext
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The Mouse Genome Database (MGD) forms the core of the Mouse Genome Informatics (MGI) system (http://www.informatics.jax.org), a model organism database resource for the laboratory mouse. ...
MGD provides essential integration of experimental knowledge for the mouse system with information annotated from both literature and online sources. ...
ACKNOWLEDGEMENTS The Mouse Genome Database is supported by NIH/NHGRI grant HG00330. ...
doi:10.1093/nar/gki113
pmid:15608240
pmcid:PMC540067
fatcat:b3zp33jchrbjhec3owbmkswslm
The mouse genome database (MGD): new features facilitating a model system
2007
Nucleic Acids Research
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The mouse genome database (MGD, http://www. informatics.jax.org/), the international community database for mouse, provides access to extensive integrated data on the genetics, genomics and biology of ...
MGD collaborates with the bioinformatics community on the development of data and semantic standards, and it incorporates key ontologies into the MGD annotation system, including the Gene Ontology (GO) ...
ACKNOWLEDGEMENTS The Mouse Genome Database is supported by NIH/ NHGRI grant HG000330. Funding to pay the Open Access publication charges for this article was provided by The Mouse Genome Database. ...
doi:10.1093/nar/gkl940
pmid:17135206
pmcid:PMC1751527
fatcat:7k2or5spprcaxgacqxy6ju3bam
The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse
2011
Nucleic Acids Research
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A summary of the current contents of MGD is given in Table 1 . Integrated with MGD are other components of the Mouse Genome Informatics (MGI) database resource (http://www.informatics.jax.org). ...
These include the Gene Expression Database (7) , the Mouse Tumor Biology Database (8) and the MouseCyc database of metabolic pathways (9) . ...
doi:10.1093/nar/gkr974
pmid:22075990
pmcid:PMC3245042
fatcat:266dcvh3yrhspdtm6q2jd3es3a
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