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Data Sharing, Clinical Trials, and Biomarkers in Precision Oncology: Challenges, Opportunities, and Programs at the Department of Veterans Affairs

LD Fiore, MT Brophy, RE Ferguson, C Shannon, SJ Turek, K Pierce-Murray, S Ajjarapu, GD Huang, CSE Lee, PW Lavori
<span title="2017-03-20">2017</span> <i title="Wiley"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/x4gh7d4fdjaj5ow3knnza5u3hq" style="color: black;">Clinical Pharmacology and Therapeutics</a> </i> &nbsp;
., non-small cell lung cancer) can arise from various mutations in tumor DNA. Thus, organ of origin is not a defini-1  ...  This article reviews the challenges and opportunities of such collaborations from the perspective of the Department of Veterans Affairs Healthcare System, the largest integrated healthcare system in the  ...  The Department of Veterans Affairs continues to make progress in this area through the Point-of-Care research 9 and Precision Oncology 10 Programs whereby patients are randomized to minimal risk alternatives  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/cpt.660">doi:10.1002/cpt.660</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/28182272">pmid:28182272</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5414893/">pmcid:PMC5414893</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/j2qxptrkbbgvlkyrnu75yj3jdm">fatcat:j2qxptrkbbgvlkyrnu75yj3jdm</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200208221151/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC5414893&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/37/40/37407b31cb20f24093f1b7f91136d8cd296d670f.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/cpt.660"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> wiley.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5414893" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

The Veterans Affairs Precision Oncology Data Repository, a Clinical, Genomic, and Imaging Research Database

Danne C. Elbers, Nathanael R. Fillmore, Feng-Chi Sung, Spyridon S. Ganas, Andrew Prokhorenkov, Christopher Meyer, Robert B. Hall, Samuel J. Ajjarapu, Daniel C. Chen, Frank Meng, Robert L. Grossman, Mary T. Brophy (+1 others)
<span title="2020-08-17">2020</span> <i title="Elsevier BV"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/5cekcl3stvfxxfsctgk6zwoqwe" style="color: black;">Patterns</a> </i> &nbsp;
The Veterans Affairs Precision Oncology Data Repository (VA-PODR) is a large, nationwide repository of de-identified data on patients diagnosed with cancer at the Department of Veterans Affairs (VA).  ...  A subset of the repository is available at the Genomic Data Commons (GDC) and The Cancer Imaging Archive (TCIA), and the full repository is available through the Veterans Precision Oncology Data Commons  ...  We present the Veterans Affairs Precision Oncology Data Repository (VA-PODR), a large-scale repository of de-identified data on patients diagnosed with cancer at the Department of Veterans Affairs (VA)  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.patter.2020.100083">doi:10.1016/j.patter.2020.100083</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/33205130">pmid:33205130</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC7660389/">pmcid:PMC7660389</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/tkei4fighbcnlmys3kvhhjwpsu">fatcat:tkei4fighbcnlmys3kvhhjwpsu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210526230116/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC7660389&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/05/f4/05f4b0da97d5c83542cb8081c475a671d6096af8.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.patter.2020.100083"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> elsevier.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7660389" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Defining next generation medicine for the patient through translational care: big data scientist training enhancement program (BD-STEP)

Connie S E Lee, Louis D Fiore
<span title="2017-12-22">2017</span> <i title="IOP Publishing"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/jcj72hysgjc5zosk6ll75jqvfq" style="color: black;">Convergent Science Physical Oncology</a> </i> &nbsp;
positively impact patient care, led to a collaboration between the Department of Veterans Affairs (VA) and the National Cancer Institute (NCI).  ...  The result of the collaboration, the big data scientist training enhancement program (BD-STEP) was launched in 2015 with the objective of enabling a transition from the traditional healthcare model of  ...  Department of Veterans Affairs (VA), which is home to the largest integrated medical system in the United States.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1088/2057-1739/aa9264">doi:10.1088/2057-1739/aa9264</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ux5ytygfhfhuvle4snxy3sp22q">fatcat:ux5ytygfhfhuvle4snxy3sp22q</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180726213055/http://iopscience.iop.org/article/10.1088/2057-1739/aa9264/pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/56/5a/565a445e2ca626d78cbf6c9a04ba51d7feaf2847.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1088/2057-1739/aa9264"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> iop.org </button> </a>

From Discovery to Practice and Survivorship: Building a National Real-World Data Learning Healthcare Framework for Military and Veteran Cancer Patients

Jerry S.H. Lee, Kathleen M. Darcy, Hai Hu, Yovanni Casablanca, Clifton L. Dalgard, John B. Freymann, Sean E. Hanlon, Grant D. Huang, Leonid Kvecher, George L. Maxwell, Frank Meng, Joel T. Moncur (+6 others)
<span title="2019-03-05">2019</span> <i title="Wiley"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/x4gh7d4fdjaj5ow3knnza5u3hq" style="color: black;">Clinical Pharmacology and Therapeutics</a> </i> &nbsp;
of Veterans Affairs.  ...  DISCLAIMER The contents of this publication are the sole responsibility of the authors and do not necessarily reflect the views, opinions, or policies of the USUHS, the Henry M.  ...  learning healthcare environment of the Department of Defense and Department of Veterans Affairs.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/cpt.1425">doi:10.1002/cpt.1425</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/30838639">pmid:30838639</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC6617989/">pmcid:PMC6617989</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/4ni377qig5h2lkdl6ibns2w5na">fatcat:4ni377qig5h2lkdl6ibns2w5na</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200505172903/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC6617989&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/8a/1d/8a1d65b3d18651a96e01787fa70b116e42070c01.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/cpt.1425"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> wiley.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6617989" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Influential Usage of Big Data and Artificial Intelligence in Healthcare

Yan Cheng Yang, Saad Ul Islam, Asra Noor, Sadia Khan, Waseem Afsar, Shah Nazir
<span title="2021-09-06">2021</span> <i title="Hindawi Limited"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/xytabl7eh5a5lle2ofnetovd7u" style="color: black;">Computational and Mathematical Methods in Medicine</a> </i> &nbsp;
In clinical work and imaging, cancer care is getting improved by knowing the tumor biology and helping in the implementation of precision medicine.  ...  In this paper, we have reviewed existing research relevant to eHealth and mHealth where various models are discussed which uses big data for the diagnosis and healthcare system.  ...  for the prediction of 30-day unplanned readmission or all-cause mortality in heart failure 2020 24 The veteran affair precision oncology data repository 2020 25 Medical big data for P4 medicine on allergic  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1155/2021/5812499">doi:10.1155/2021/5812499</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/34527076">pmid:34527076</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC8437645/">pmcid:PMC8437645</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/lmpwildgefggrisquu6ebwu2iu">fatcat:lmpwildgefggrisquu6ebwu2iu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210923184032/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC8437645&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/ed/1c/ed1c0f66f1e0429ba3611c061d26737e54b11717.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1155/2021/5812499"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> hindawi.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8437645" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Development of a Multi-Study Repository to Support Research on Veteran Health: The VA Cooperative Studies Program Epidemiology Center-Durham (CSPEC-Durham) Data and Specimen Repository

Meghan C. O'Leary, R. Lawrence Whitley, Ashlyn Press, Dawn Provenzale, Christina D. Williams, Blair Chesnut, Rodney Jones, Thomas S. Redding, Kellie J. Sims
<span title="2021-02-17">2021</span> <i title="Frontiers Media SA"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/athqjlcrona7rgynvfhqsnauza" style="color: black;">Frontiers in Public Health</a> </i> &nbsp;
Federal agencies, including the Department of Veterans Affairs (VA), have prioritized improved access to scientific data and results collected through federally funded research.  ...  Our VA Cooperative Studies Program Epidemiology Center in Durham, North Carolina (CSPEC-Durham) assembled a repository of data and specimens collected through multiple studies on Veteran health issues  ...  We would also like to thank the Veterans who participated in the research studies included in our repository for their time and willingness for their data and specimens to be used to support future research  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3389/fpubh.2021.612806">doi:10.3389/fpubh.2021.612806</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/33681131">pmid:33681131</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC7925406/">pmcid:PMC7925406</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/6j2s5pifbvgdpb4jgkxxpymwzi">fatcat:6j2s5pifbvgdpb4jgkxxpymwzi</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210427143848/https://fjfsdata01prod.blob.core.windows.net/articles/files/612806/pubmed-zip/.versions/1/.package-entries/fpubh-09-612806/fpubh-09-612806.pdf?sv=2018-03-28&amp;sr=b&amp;sig=JTDo3pc9ZDZuxeEBOhB7EpHIxNkgqFmcmnufhso6Z9g%3D&amp;se=2021-04-27T14%3A39%3A16Z&amp;sp=r&amp;rscd=attachment%3B%20filename%2A%3DUTF-8%27%27fpubh-09-612806.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/7d/34/7d34bff1da5874fb2766395dc5ee27655d2d26f0.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3389/fpubh.2021.612806"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> frontiersin.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7925406" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

How Will Big Data Improve Clinical and Basic Research in Radiation Therapy?

Barry S. Rosenstein, Jacek Capala, Jason A. Efstathiou, Jeff Hammerbacher, Sarah L. Kerns, Feng-Ming (Spring) Kong, Harry Ostrer, Fred W. Prior, Bhadrasain Vikram, John Wong, Ying Xiao
<span title="">2016</span> <i title="Elsevier BV"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/r3z6tg2rqbbd3fflq2iu4rgpky" style="color: black;">International Journal of Radiation Oncology, Biology, Physics</a> </i> &nbsp;
Because data are fundamental to their craft, these investigators have been on the front lines of the Big Data deluge in recent years.  ...  In addition, wellcurated research and trial data are being pooled in public data repositories to support large-scale analyses.  ...  Jatinder Palta are thanked for the information concerning EUROCAT and VA system, respectively.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.ijrobp.2015.11.009">doi:10.1016/j.ijrobp.2015.11.009</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/26797542">pmid:26797542</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC4864183/">pmcid:PMC4864183</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/2cqg7gkca5hpxn4ekmfcup664q">fatcat:2cqg7gkca5hpxn4ekmfcup664q</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180722001002/https://manuscript.elsevier.com/S036030161526703X/pdf/S036030161526703X.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/6b/46/6b4676c7fa6fc74bd48f1a5386caf04130672976.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.ijrobp.2015.11.009"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> elsevier.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4864183" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Implementation of low-dose CT screening in two different health care systems: Mount Sinai Healthcare System and Phoenix VA Health Care System

Claudia I Henschke, David F Yankelevitz, Artit Jirapatnakul, Rowena Yip, Vivian Reccoppa, Charlene Benjamin, Tserling Llamo, Angel Williams, Simon Liu, Daniel Max, Samuel M Aguayo, Providencia Morales (+8 others)
<span title="">2021</span> <i title="AME Publishing Company"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/e4pgye6ikzcorllih5x3ewnhoq" style="color: black;">Translational Lung Cancer Research</a> </i> &nbsp;
We provide a case study of LS implementation in different healthcare systems, at the Mount Sinai Healthcare System (MSHS) in New York City, and at the Phoenix Veterans Affairs Health Care System (PVAHCS  ...  We identified 10 critical components in implementing a LS program. We provided the details of each of these components for the two healthcare systems.  ...  The views presented in this manuscript are those of the authors and do not reflect the views of the U.S. Government or the Department of Veterans Affairs.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.21037/tlcr-20-761">doi:10.21037/tlcr-20-761</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/33718045">pmid:33718045</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC7947390/">pmcid:PMC7947390</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/vr23gygrrfck5eaips6he6mnfi">fatcat:vr23gygrrfck5eaips6he6mnfi</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210716045522/https://tlcr.amegroups.com/article/viewFile/47784/pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/fa/95/fa95fd9e1ec279b59ed05deb0b66e245db15d8f5.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.21037/tlcr-20-761"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7947390" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

The Uniformed Services University's Surgical Critical Care Initiative (SC2i): Bringing Precision Medicine to the Critically Ill

Arnaud Belard, Timothy Buchman, Christopher J Dente, Benjamin K Potter, Allan Kirk, Eric Elster
<span title="2018-03-01">2018</span> <i title="Oxford University Press (OUP)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/p2g77rcmcjaozgihldxgdylqs4" style="color: black;">Military medicine</a> </i> &nbsp;
Precision medicine endeavors to leverage all available medical data in pursuit of individualized diagnostic and therapeutic plans to improve patient outcomes in a cost-effective manner.  ...  The Department of Defense has a vested interest in advancing precision medicine for those sent into harm's way and specifically seeks means of individualizing care in the context of complex and highly  ...  The NIH has taken a prominent role in answering the Executive Branch's call-to-arms (e.g., National Cancer Moonshot Initiative) and other agencies (Department of Defense and Department of Veterans Affairs  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/milmed/usx164">doi:10.1093/milmed/usx164</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/29635571">pmid:29635571</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/6usq7nocqrcrln5tyh7dnmiwk4">fatcat:6usq7nocqrcrln5tyh7dnmiwk4</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180726210527/https://watermark.silverchair.com/usx164.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAbQwggGwBgkqhkiG9w0BBwagggGhMIIBnQIBADCCAZYGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMw_KTuuxepKk_1mXiAgEQgIIBZ9LcbYaROy9RpxliG6X8itmSRfR6yu858eJZ0AZEdl2EqZwcogGtO0wIJs5VOI80DzlCicbJhaOFHcD17FYqd30utgH_mNPQ-hNeeUxY8I-99EF7t7EqTUDAtV2Q1C-1hGxKip4Yl2r5D-vXV1cfVfYDZ1s5y2zcAatbsI85HC6VMgWCdYuQYCzqRTvza-e63WLFRRW93GeamrWbtnMWroVZKqIJ-kbNsXb6YdbXEPkKw-zTNl3p7RdhUOqMNpnMq3nZkQOVUirxIFtSHkYHs8fQucUrcdwvznAKRovCXzaQMCMJpIsiL-hhdzlkVxCVUZD3SndlJaNkgjy0rq971aBhNTq8jLHsD9jKMEfyDZmw1A69_W9HU4Qepz-8LcPFpl40ozCfDDTaUUGEp0TKN-_0r4gOi_bbd27fLeDxfq6Vo_qQo5-WorFirDDYia8sl2H5ixgBp-pIk-0DW-NlevIsYvkthITk" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/d0/ce/d0cedcca0a3a9359cbc82c81f74fa8d77401a891.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/milmed/usx164"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> oup.com </button> </a>

An Informatics Blueprint for Healthcare Quality Information Systems

J. C. Niland, L. Rouse, D. C. Stahl
<span title="2006-07-01">2006</span> <i title="Oxford University Press (OUP)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/aapnwtybrvghlc35hfimbtdlom" style="color: black;">JAMIA Journal of the American Medical Informatics Association</a> </i> &nbsp;
blueprint" to guide the development of such systems.  ...  A robust healthcare quality information system (HQIS) has the potential to address this deficiency through the capture, codification, and analysis of information about patient treatments and related outcomes  ...  is a very promising drug vocabulary in development by the National Library of Medicine, in consultation with the Food and Drug Administration, the Department of Veterans Affairs, and the Health Level-  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1197/jamia.m2050">doi:10.1197/jamia.m2050</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/16622161">pmid:16622161</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC1513682/">pmcid:PMC1513682</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ypdtixwrivhojikrjnqlylgvvu">fatcat:ypdtixwrivhojikrjnqlylgvvu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190302102417/http://pdfs.semanticscholar.org/a1b9/7dba3237293c7763cdb6b2afd9ce0d83e6fb.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/a1/b9/a1b97dba3237293c7763cdb6b2afd9ce0d83e6fb.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1197/jamia.m2050"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1513682" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

A Comprehensive Infrastructure for Big Data in Cancer Research: Accelerating Cancer Research and Precision Medicine

Izumi V. Hinkson, Tanja M. Davidsen, Juli D. Klemm, Ishwar Chandramouliswaran, Anthony R. Kerlavage, Warren A. Kibbe
<span title="2017-09-21">2017</span> <i title="Frontiers Media SA"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/4dl6zyzmsrhczjurbzfc3hrzn4" style="color: black;">Frontiers in Cell and Developmental Biology</a> </i> &nbsp;
These NCI-led efforts are continuously being refined to better support open data practices and precision oncology, and to serve as building blocks of the NCI Cancer Research Data Commons.  ...  Advancements in next-generation sequencing and other -omics technologies are accelerating the detailed molecular characterization of individual patient tumors, and driving the evolution of precision medicine  ...  ACKNOWLEDGMENTS We thank NCI Center for Biomedical Informatics and Information Technology (CBIIT), Center for Cancer Genomics, Office of Clinical Cancer Proteomics Research, GDC, and the CGC Pilot teams  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3389/fcell.2017.00083">doi:10.3389/fcell.2017.00083</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/28983483">pmid:28983483</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5613113/">pmcid:PMC5613113</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/jzwud34zvbgcbk5myj2kaffjnq">fatcat:jzwud34zvbgcbk5myj2kaffjnq</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190305082639/http://pdfs.semanticscholar.org/c6c7/23f28174f78816e862445a364ecacbd25a85.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/c6/c7/c6c723f28174f78816e862445a364ecacbd25a85.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3389/fcell.2017.00083"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> frontiersin.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5613113" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Secondary use of electronic medical records for clinical research: challenges and opportunities

Wen-Wai Yim, Amanda J Wheeler, Catherine Curtin, Todd H Wagner, Tina Hernandez-Boussard
<span title="2018-02-12">2018</span> <i title="IOP Publishing"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/jcj72hysgjc5zosk6ll75jqvfq" style="color: black;">Convergent Science Physical Oncology</a> </i> &nbsp;
With increasingly ubiquitous electronic medical record (EMR) implementation accelerated by the adoption of the HITECH Act, there is much interest in the secondary use of collected data to improve outcomes  ...  EMRs in an academic hospital and the Veterans Health Administration (VHA).  ...  WY was also supported by the Big Data Scientist Training Enhancement Program (BD-STEP) fellowship. CC was supported by the Department of Veterans Affairs.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1088/2057-1739/aaa905">doi:10.1088/2057-1739/aaa905</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/29732166">pmid:29732166</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5933881/">pmcid:PMC5933881</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/2wnmkdbubne23bsjopa5uo7mom">fatcat:2wnmkdbubne23bsjopa5uo7mom</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190502202140/https://iopscience.iop.org/article/10.1088/2057-1739/aaa905/pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/4f/ee/4feeee9343bcb0f2d2a6fe23bb15a7f8b38a8e56.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1088/2057-1739/aaa905"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> iop.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5933881" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Association of Provider Specialty and Multidisciplinary Care With Hepatocellular Carcinoma Treatment and Mortality

Marina Serper, Tamar H. Taddei, Rajni Mehta, Kathryn D'Addeo, Feng Dai, Ayse Aytaman, Michelle Baytarian, Rena Fox, Kristel Hunt, David S. Goldberg, Adriana Valderrama, David E. Kaplan
<span title="">2017</span> <i title="Elsevier BV"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/eyzywt3quvdnndezszw7mtfy3q" style="color: black;">Gastroenterology</a> </i> &nbsp;
Currently, most data on HCC outcomes in the US have been derived from the Surveillance, Epidemiology, and End Results (SEER)-Medicare data.  ...  The Veterans Serper et al.  ...  Acknowledgments The views expressed in this article are those of the authors and do not necessarily represent the views of the US Department of Veterans Affairs of the US Government.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1053/j.gastro.2017.02.040">doi:10.1053/j.gastro.2017.02.040</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/28283421">pmid:28283421</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5664153/">pmcid:PMC5664153</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/b7d3imouqvfgxmod2cabr4ngd4">fatcat:b7d3imouqvfgxmod2cabr4ngd4</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20191205164333/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC5664153&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/ed/23/ed238972221fa36ec2c78567c086121433881daa.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1053/j.gastro.2017.02.040"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5664153" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

The IGNITE network: a model for genomic medicine implementation and research

Kristin Wiisanen Weitzel, Madeline Alexander, Barbara A. Bernhardt, Neil Calman, David J. Carey, Larisa H. Cavallari, Julie R. Field, Diane Hauser, Heather A. Junkins, Phillip A. Levin, Kenneth Levy, Ebony B. Madden (+16 others)
<span title="">2015</span> <i title="Springer Nature"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/rbtzjpig4jcsfbjr5yo23sjnj4" style="color: black;">BMC Medical Genomics</a> </i> &nbsp;
Methods: To address these challenges, the National Institutes of Health-funded IGNITE (Implementing GeNomics In pracTicE; www.ignite-genomics.org) Network, comprised of six projects and a coordinating  ...  and use measures of outcome in response to genome-based clinical interventions using a pragmatic framework to provide early data and proofs of concept on the utility of these interventions.  ...  In oncology, genetic testing and decision support is being implemented for erlotinib in the treatment of NSCLC and vemurafenib for melanoma.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/s12920-015-0162-5">doi:10.1186/s12920-015-0162-5</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/26729011">pmid:26729011</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC4700677/">pmcid:PMC4700677</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/cg3vi5onmbhjrjorcsp5gvzpne">fatcat:cg3vi5onmbhjrjorcsp5gvzpne</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20171012162433/http://publisher-connector.core.ac.uk/resourcesync/data/Springer-OA/pdf/51d/aHR0cDovL2xpbmsuc3ByaW5nZXIuY29tLzEwLjExODYvczEyOTIwLTAxNS0wMTYyLTUucGRm.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/f8/99/f8994bff726440e3cb7bd762448d3f43d8c6f4a4.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/s12920-015-0162-5"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> springer.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4700677" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

CPNP 2022 Annual Meeting Poster Abstracts

<span title="2022-04-01">2022</span> <i title="College of Psychiatric and Neurologic Pharmacists (CPNP)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/t755zla33naqjlnezyhfcxzgwq" style="color: black;">Mental Health Clinician</a> </i> &nbsp;
Articles describing patients with antidepressant overdose or omitting a diagnosis of depression, baseline QTc measurement, or maximum QTc measurement were excluded except in the event of sudden cardiac  ...  The three risk scoring tools agreed in 4/11 (36%) cases. For the remaining 7/11 (64%) cases the Tisdale and RISQ-PATH scores identified risk as "low" whereas the Mayo score identified risk as "high".  ...  Amand, PharmD, BCPS, BCACP Providence Veterans Affairs Healthcare System, Providence, RI Type: Work in Progress.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.9740/mhc.2022.04.089">doi:10.9740/mhc.2022.04.089</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/eneexxfivrcjxitx6earz6vsya">fatcat:eneexxfivrcjxitx6earz6vsya</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20220517231051/https://watermark.silverchair.com/i2168-9709-12-2-89.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAtMwggLPBgkqhkiG9w0BBwagggLAMIICvAIBADCCArUGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMin4ICXM9nHDG9XthAgEQgIIChkvdFwQiqbXcqGAymvTvJF0WDOFT_BWtzevAPLEhTm6eX8VfJwMu7WxU_-GF5zNvOAIjbPCG9ZSUoTsR_45xgFBegmHg7zV1sAo9er5sBxUPa7gg1azELbeRONBGQqIRAsQhNlHkt4UJw2jptJqn_Volyozmd9ygUOrtyiJca_NL7rUrrHd1-NiZTvBVWc2BtJ02pmfUFTBu61RsoSOzVeNv2b_oQE_tKhsk0qLNXN9uVbCkVDqcjhxVBuQ4T6ygCnm7_lpc-3XSuguWqFUxXcjj_5sofghmit2pk0AFvIa8RSMQGPGNXXmw8feJUzr_ECCti_E1xvD38CcY5XbLGJC9F6zkVyiqrAPB_2uNnPpz4xmmms_6AchaEgf0q1RN0k1wUfAFcMUf1QzL1nVptJPBERwKx8ew-P7CCIzo6GL7F0nqGWBEfUSnVpjuQV9O6lcMjd53LSYUbcgTnSm_ewerxOvnNcs8mj6V9YhZi9__bhUCLWhk6V49r4_DtywbXJvcnGbWlxs7zutSDACK36Y3g0vtSP_UGucX2Aw-6W_eUVneF1fLmHdiWWZH5ZJvwUQd7wjFxN5QSD4z4_qF13Z9-URnGAAljD6I-gMAwsmUUn8ugFhw289_-gVQMRFV0olpzo3kcDqKwmFB1k9w41bjYHIcXdMNDWUpd060yZKRdcp3jFKuMC-MkaQqO6TzK82QHV4BbqTzLdnOuSnKIPk_Edq8hknh5ZgFWtcAs4TCvPfCxNbnH7noboGUX08nCojPOAnt9kI-Hl5UMm5aWHHI_CkyEjWCJ24hn5EuyVWcb_VItPVD_0AierlKAAGN8EuFGYTuI33otWYQy2TOo-_nXAxQusw" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/97/89/9789cfaf25a124c9f80b9d49aad19a85bece23ff.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.9740/mhc.2022.04.089"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> Publisher / doi.org </button> </a>
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