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The encyclopedia of life project: Grid software and deployment

Wilfred W. Li, Robert W. Byrnes, Jim Hayes, Adam Birnbaum, Vicente M. Reyes, Atif Shahab, Coleman Mosley, Dmitry Pekurovsky, Greg B. Quinn, Ilya N. Shindyalov, Henri Casanova, Larry Ang (+4 others)
2004 New generation computing  
The Encyclopedia of Life (EOL; http://eol.sdsc.edu) project aims to provide current functional and structural annotations for all available proteomes, a computational challenge never seen before in biology  ...  The architecture of BWMS is flexible and based on the grid service model.  ...  We'd also like to thank SDSC, BII and TiTech staff who provided support for the project.  ... 
doi:10.1007/bf03040951 fatcat:roit7dmih5btbodnd3hnjm65gq

Grid Workflow Software for a High-Throughput Proteome Annotation Pipeline [chapter]

Adam Birnbaum, James Hayes, Wilfred W. Li, Mark A. Miller, Peter W. Arzberger, Phililp E. Bourne, Henri Casanova
2005 Lecture Notes in Computer Science  
The goal of the Encyclopedia of Life (EOL) Project is to predict structural information for all proteins, in all organisms.  ...  While tools are available that solve some subsets of these problems, it was necessary for us to build software to integrate and manage the overall Grid application execution.  ...  Conclusion In this paper we have presented an integrated software pipeline for deploying the Encyclopedia of Life (EOL) application on large-scale Grid platforms.  ... 
doi:10.1007/978-3-540-32251-1_7 fatcat:ajnovyiy5bhd5dlslkq4pqw3sa

Grid Portal Interface for Interactive Use and Monitoring of High-Throughput Proteome Annotation [chapter]

Atif Shahab, Danny Chuon, Toyotaro Suzumua, Wilfred W. Li, Robert W. Byrnes, Kouji Tanaka, Larry Ang, Satoshi Matsuoka, Philip E. Bourne, Mark A. Miller, Peter W. Arzberger
2005 Lecture Notes in Computer Science  
The deployment of iGAP on the grid using grid middleware and mediator software has been described previously [4] .  ...  The intrinsic complexity of the pipeline makes iGAP an ideal life sciences application to drive grid software development. It is a flagship application for the TeraGrid project [3].  ...  for their work in the workflow and APST; Hidemoto Nakada at TiTech for help during GridSpeed development.  ... 
doi:10.1007/978-3-540-32251-1_6 fatcat:ik3skiae7feajo2r5k6jr7psg4

Building Watson: An Overview of the DeepQA Project

David Ferrucci, Eric Brown, Jennifer Chu-Carroll, James Fan, David Gondek, Aditya A. Kalyanpur, Adam Lally, J. William Murdock, Eric Nyberg, John Prager, Nico Schlaefer, Chris Welty
2010 The AI Magazine  
Challenge helped us address requirements that led to the design of the DeepQA architecture and the implementation of Watson.  ...  After 3 years of intense research and development by a core team of about 20 researches, Watson is performing at human expert-levels in terms of precision, confidence and speed at the Jeopardy!  ...  and develop all aspects of Watson and the DeepQA architecture.  ... 
doi:10.1609/aimag.v31i3.2303 fatcat:bqzu6kcak5gnhpabvyv6vuc7n4

Web and Grid Technologies in Bioinformatics, Computational and Systems Biology: A Review

Natalio Krasnogor, Azhar Shah, Daniel Barthel, Piotr Lukasiak, Jacek Blazewicz
2008 Current Bioinformatics  
A major focus of this technological review is to collate up-to-date information regarding the design and implementation of various bioinformatics Webs, Grids, Web-based grids or Grid-based webs in terms  ...  The use of computational and networking resources is thus unavoidable.  ...  Grid-based Frameworks In software development, a framework specifies the required structure of the environment needed for the development, deployment, execution and organization of a software application  ... 
doi:10.2174/157489308783329850 fatcat:thpj6eywwvg5tfdqvbw5nch3ty

Modernised learning delivery strategies: The Canada School of Public Service technology integration project

2018 International Perspectives and Interactions in Education  
We conducted a review of modernised online programme development and delivery strategies, evaluated the School's current progress against those strategies, and recommended an integrated set of proposed  ...  The Canada School of Public Service (CSPS) leadership expressed a desire to modernise online programme development and delivery in order to more effectively meet the School's mandate.  ...  Acknowledgements Members of the National Research Council of Canada project team included Bruno Emond, Hélène Fournier, Irina Kondratova and Shirley MacLeod.  ... 
doi:10.37074/jalt.2018.1.2.3 fatcat:qpr7efudrrhkfcsliapbijig2q

Roar of the Future - Cloud Computing
English

Pragya Agrawal
2015 International Journal of Engineering Trends and Technoloy  
The final thesis work describes and analyses cloud computing world and specially Eucalyptus, a software platform for the implementation of private cloud computing on clusters.  ...  As a practical work, it have been release a desktop client for interact with Eucalyptus that allow users to run and connect to virtual machines inside the system.  ...  This service includes all the life-cycle of the deployment of application/ service such as design, implementation, testing, deployment, integrity with databases, etc PaaS Exmples: C.  ... 
doi:10.14445/22315381/ijett-v24p212 fatcat:h5xdh4s3ebb7naa5sn3txryefq

TOLKIN – Tree of Life Knowledge and Information Network: Filling a Gap for Collaborative Research in Biological Systematics

Reed S. Beaman, Greg H. Traub, Christopher A. Dell, Nestor Santiago, Jin Koh, Nico Cellinese, Robert DeSalle
2012 PLoS ONE  
The TOLKIN project (Tree of Life Knowledge and Information Network) addresses this need by supporting capabilities to manage, integrate, and provide public access to molecular, morphological, and biocollections  ...  The development of biological informatics infrastructure capable of supporting growing data management and analysis environments is an increasing need within the systematics biology community.  ...  Throughout the course of our software development the following people helped us to address specific user requirements and technical issues: Purnashree Bhattacharya, Andre Chanderbali, Ugandhar Reddy Chittamurru  ... 
doi:10.1371/journal.pone.0039352 pmid:22724002 pmcid:PMC3377657 fatcat:l3snprhw7nbmzojwasnen4nn7i

Geographic Information Systems, An Introduction, Second Edition

Gordon Kennedy
2001 Cartographic Perspectives  
In an introductory text, one expects a methodical description of the earth and its shape, the logic of geographic coordinates, the need for map projections and grid coordinate systems, the methods employed  ...  Two large chapters delineate the organizational and technical issues surrounding GIS acquisition and deployment.  ... 
doi:10.14714/cp38.798 fatcat:epgyvckz5vbdhbvjurzp5u4cri

Digital Sovereignty and Software Engineering for the IoT-laden, AI/ML-driven Era [article]

Christian Berger
2022 arXiv   pre-print
Today's software engineering already needs to deal with challenges originating from the multidisciplinarity that is required to realize IoT products: Many variants consist of sensor/actuator-powered systems  ...  and extend digital sovereignty from a software engineering's perspective.  ...  What are the long-term project vision and ideas for the external software project? How active, responsive, and inclusive is the developer community around the external project?  ... 
arXiv:2205.14137v1 fatcat:saksyv35hra7foez2xmcpcfucq

Importance of Process Mining for Big Data Requirements Engineering

Sandhya Rani Kourla, Eesha Putti, Mina Maleki
2020 International Journal of Computer Science & Information Technology (IJCSIT)  
Requirements engineering (RE), as a part of the project development life cycle, has increasingly been recognized as the key to ensure on-time, on-budget, and goal-based delivery of software projects.  ...  Data processing can be benefited by process mining, and in turn, helps to increase the productivity of the big data projects.  ...  After gathering engineered requirements documented in the SRS report, other processes of the software development life cycles, including design, implementation, testing, deployment, and maintenance, will  ... 
doi:10.5121/ijcsit.2020.12401 fatcat:6fvruwovunfddh7fk22yeztjeq

Importance of Process Mining for Big Data Requirements Engineering

Sandhya Rani Kourla, Eesha Putti, Mina Maleki
2020 Zenodo  
Requirements engineering (RE), as a part of the project development life cycle, has increasingly been recognized as the key to ensure on-time, on-budget, and goal-based delivery of software projects.  ...  Data processing can be benefited by process mining, and in turn, helps to increase the productivity of the big data projects.  ...  After gathering engineered requirements documented in the SRS report, other processes of the software development life cycles, including design, implementation, testing, deployment, and maintenance, will  ... 
doi:10.5281/zenodo.4011576 fatcat:byk4mpi2cneynnu7osiu6xh5bq

Entity-fishing: A DARIAH Entity Recognition and Disambiguation Service

Luca Foppiano, Laurent Romary
2020 Journal of the Japanese Association for Digital Humanities  
Initially developed in the context of the FP9 EU project CENDARI, the software was well received by the user community and continued to be further developed within the H2020 HIRMEOS project where several  ...  We conclude the paper by presenting our solution for the service deployment: how and which the resources where allocated.  ...  This implies tackling the following tasks: • license checking (for open-source projects) • consolidation of the project life cycle (build, testing, and deployment) • publication of the documentation (for  ... 
doi:10.17928/jjadh.5.1_22 fatcat:noxggjlhljbqbm3ibwm2p3tjiu

Technology roadmap for smart electric vehicle-to-grid (V2G) of residential chargers

Tugrul U. Daim, Xiaowen Wang, Kelly Cowan, Tom Shott
2016 Journal of Innovation and Entrepreneurship  
Smart grid is defined as the overlaying of a unified communications and control system onto the existing power delivery infrastructure to provide the right information and the right entity at the right  ...  Many of the advanced applications of smart grid are expected to develop in an evolutionary manner based on current technologies available and the needs of the market, for example, electric vehicles (EVs  ...  The customer will need software tools to program when and what they need in terms of driving range.  ... 
doi:10.1186/s13731-016-0043-y fatcat:eyzaqogyfnbwbixrihty6zehbm

Baseline model of a centralized pv electrolytic hydrogen system

J MASON, K ZWEIBEL
2007 International journal of hydrogen energy  
The 11 life cycle primary energy use is 36 MJ/kg of H 2 consumption, and life cycle CO 2 equivalent emissions are 2.6 kg/kg of H 2 consumption.  ...  The size of the pv electrolysis plant to 9 produce this quantity of H 2 is a 5.12-GW dc-in electrolysis plant and a 6.0-GW p pv power plant. The land area of the pv electrolysis plant is 260 km 2 .  ...  Acknowledgement HRI would like to thank the Solar Energy Campaign for funding to support this research.  ... 
doi:10.1016/j.ijhydene.2006.12.019 fatcat:tlstya3xkjb7hn7oyyuntpb3qe
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