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TIARA: a database for accurate analysis of multiple personal genomes based on cross-technology

Dongwan Hong, Sung-Soo Park, Young Seok Ju, Sheehyun Kim, Jong-Yeon Shin, Sujung Kim, Saet-Byeol Yu, Won-Chul Lee, Seungbok Lee, Hansoo Park, Jong-Il Kim, Jeong-Sun Seo
2010 Nucleic Acids Research  
More personal genomes will be archived as more individuals are analyzed by NGS or CGH array. TIARA provides a new approach to the accurate interpretation of personal genomes for genome research.  ...  Although the integration of technologies is important for high-accuracy detection of personal genomic variations, no databases have been prepared to systematically archive genomes and to facilitate the  ...  The TIARA genome browser is a unique visualization tool that facilitates multi-individual and cross-technology analysis of complex human genomic variations.  ... 
doi:10.1093/nar/gkq1101 pmid:21051338 pmcid:PMC3013693 fatcat:r4w3cfjd7zajzdskoktetuie2y

Extensive genomic and transcriptional diversity identified through massively parallel DNA and RNA sequencing of eighteen Korean individuals

Young Seok Ju, Jong-Il Kim, Sheehyun Kim, Dongwan Hong, Hansoo Park, Jong-Yeon Shin, Seungbok Lee, Won-Chul Lee, Sujung Kim, Saet-Byeol Yu, Sung-Soo Park, Seung-Hyun Seo (+13 others)
2011 Nature Genetics  
Massively parallel sequencing technologies have identified a broad spectrum of human genome diversity.  ...  Our findings suggest that a considerable number of unexplored genomic variants still remain to be identified in the human genome, and that the integrated analysis of genome and transcriptome sequencing  ...  More personal genome sequencing with longer read length and higher read depth will provide a more accurate understanding of the prevalence and locations of indels in the human genome.  ... 
doi:10.1038/ng.872 pmid:21725310 fatcat:qja5chxevbg2zij6xe6xfwcdzu

Shape-based retrieval of CNV regions in read coverage data

Sangkyun Hong, Jeehee Yoon, Dongwan Hong, Unjoo Lee, Baeksop Kim, Sanghyun Park
2014 International Journal of Data Mining and Bioinformatics  
The mean shift transform is a procedure for gaining a preliminary estimation of the CNVs Shape-based retrieval of CNV regions in read coverage data 255 by statistically evaluating moving averages of given  ...  This study proposes a novel copy number variation (CNV) detection method, CNV_shape, based on variations in the shape of the read coverage data which are obtained from millions of short reads aligned to  ...  Shape-based retrieval of CNV regions in read coverage data  ... 
doi:10.1504/ijdmb.2014.060051 pmid:25163168 fatcat:nkvuwqueqrfhlbaxu6bdfijppe

Real-world driving speciated VOC hot start emissions of the 2001 French passenger car fleet

Yannick Flandrin, Robert Vidon, Fabrice Cazier, Stephanie Hue, Jean Claude Dechaux, Valerie Nollet
2001 International Journal of Vehicle Design  
The mean shift transform is a procedure for gaining a preliminary estimation of the CNVs Shape-based retrieval of CNV regions in read coverage data 255 by statistically evaluating moving averages of given  ...  This study proposes a novel copy number variation (CNV) detection method, CNV_shape, based on variations in the shape of the read coverage data which are obtained from millions of short reads aligned to  ...  Shape-based retrieval of CNV regions in read coverage data  ... 
doi:10.1504/ijvd.2001.001959 fatcat:mpsjb6l455fjhg6s5fzh3g2254

Etymologia: Lassa

JD Frame
2010 Emerging Infectious Diseases  
, Clint McDaniel, Brian Sizemore, and Sarah Talarico for helpful discussions on methods approaches to data analysis.  ...  We report on a 4-year-old intact male rabbit from a private breeder in Germany that died suddenly in May 2017.  ...  Because of this limited cross-protection from infections of different enterovirus serotypes, multiple HFMD episodes can occur in a single person.  ... 
doi:10.3201/eid1606.999999 fatcat:onkpmxwhkfd53bcsmyt7icx7vy

Combining Computational Analyses and Interactive Visualization for Document Exploration and Sensemaking in Jigsaw

C. Gorg, Zhicheng Liu, Jaeyeon Kihm, Jaegul Choo, Haesun Park, J. Stasko
2013 IEEE Transactions on Visualization and Computer Graphics  
Taking a visual analytics approach, we integrate multiple text analysis algorithms with a suite of interactive visualizations in order to provide a flexible and powerful environment that allows analysts  ...  Our particular focus is on the process of integrating automated analyses with interactive visualizations in a smooth and fluid manner.  ...  Department of Homeland Security's VACCINE Center under Award Number 2009-ST-061-CI0001. 5 . http://www.cc.gatech.edu/gvu/ii/jigsaw  ... 
doi:10.1109/tvcg.2012.324 pmid:23267206 fatcat:hjhelczb2bektfft4q4azva6b4

Photonics applications and web engineering: WILGA May 2013

Ryszard S. Romaniuk, Ryszard S. Romaniuk
2013 Photonics Applications in Astronomy, Communications, Industry, and High-Energy Physics Experiments 2013  
It is also a great occasion for SPIE, IEEE, OSA and PSP students and young researchers to meet together in a large group spanning the whole country with guests from this part of Europe.  ...  / on 11/02/2013 Terms of Use: http://spiedl.org/terms  ...  Predicted software architecture is: multiple class, object programming based, complicated, and of flexible architecture.  ... 
doi:10.1117/12.2035420 fatcat:bujy4qt6tfewpm6rblg2g4nc4q

Hadrian vs. Apollodorus of Damascus: Who built the Pantheon? Breaking the Fast The Cost of Eating

Alison Burg, Savannah Fielder, Stephanie Hoke, Carlton Troutman, Christopher Duvall, Virginia Nagy, Jocelyn Hofstra, Robert Heller, Tiara Holt, Robert Heller
unpublished
How people start their day says a lot about them. It is usually a time spent alone or just with family before we put on our face for the rest of the world.  ...  YouTube is a great way to not only view videos but also test your ideas immediately on millions of people worldwide.  ...  The subsequent comparative genomics analysis revealed a fused restriction-modification gene Cj1051c was responsible for HFC in C. jejuni.  ... 
fatcat:c25lnk6byfgtrldf32zxjuolzq

Scientific program committee

2005 Journal of the Society for Gynecologic Investigation  
It is used for high-resolution material analysis like hydrogen microscopy or material modification as well as radiobiological experiments.  ...  An upgrade of SNAKE to a single-ion cell irradiation facility was completed 2 years ago and successfully tested and is now routinely used for radiobiological experiments.  ...  Part of this study was financially supported by the Budget for Nuclear Research of the Ministry of Education, Culture, Sports, Science and Technology, based on the screening and counseling by the Atomic  ... 
doi:10.1016/j.jsgi.2005.01.012 fatcat:orxney4yp5gn3hfxid3hfha3iy

Scientific Program Committee

2010 Alzheimer's & Dementia  
It is used for high-resolution material analysis like hydrogen microscopy or material modification as well as radiobiological experiments.  ...  An upgrade of SNAKE to a single-ion cell irradiation facility was completed 2 years ago and successfully tested and is now routinely used for radiobiological experiments.  ...  Part of this study was financially supported by the Budget for Nuclear Research of the Ministry of Education, Culture, Sports, Science and Technology, based on the screening and counseling by the Atomic  ... 
doi:10.1016/s1552-5260(10)02161-8 fatcat:ek2sk6t7lfcfddtohxxblhnona

Scientific Program Committee

2012 Alzheimer's & Dementia  
It is used for high-resolution material analysis like hydrogen microscopy or material modification as well as radiobiological experiments.  ...  An upgrade of SNAKE to a single-ion cell irradiation facility was completed 2 years ago and successfully tested and is now routinely used for radiobiological experiments.  ...  Part of this study was financially supported by the Budget for Nuclear Research of the Ministry of Education, Culture, Sports, Science and Technology, based on the screening and counseling by the Atomic  ... 
doi:10.1016/s1552-5260(12)02268-6 fatcat:oin7d4bfyvevvd6gogwcjyeaze

2016 Scientific Program Committee

2016 Journal of the American Society of Hypertension : JASH  
It is used for high-resolution material analysis like hydrogen microscopy or material modification as well as radiobiological experiments.  ...  An upgrade of SNAKE to a single-ion cell irradiation facility was completed 2 years ago and successfully tested and is now routinely used for radiobiological experiments.  ...  Part of this study was financially supported by the Budget for Nuclear Research of the Ministry of Education, Culture, Sports, Science and Technology, based on the screening and counseling by the Atomic  ... 
doi:10.1016/s1933-1711(16)30401-6 fatcat:c762kmlatnannhfl5jtuopjfj4

Scientific Program Committee

2001 Journal of the Society for Gynecologic Investigation  
It is used for high-resolution material analysis like hydrogen microscopy or material modification as well as radiobiological experiments.  ...  An upgrade of SNAKE to a single-ion cell irradiation facility was completed 2 years ago and successfully tested and is now routinely used for radiobiological experiments.  ...  Part of this study was financially supported by the Budget for Nuclear Research of the Ministry of Education, Culture, Sports, Science and Technology, based on the screening and counseling by the Atomic  ... 
doi:10.1016/s1071-5576(01)80003-4 fatcat:lna5gr4dsvc45d3b5kuzezumua

Scientific program committee

2004 Journal of the Society for Gynecologic Investigation  
It is used for high-resolution material analysis like hydrogen microscopy or material modification as well as radiobiological experiments.  ...  An upgrade of SNAKE to a single-ion cell irradiation facility was completed 2 years ago and successfully tested and is now routinely used for radiobiological experiments.  ...  Part of this study was financially supported by the Budget for Nuclear Research of the Ministry of Education, Culture, Sports, Science and Technology, based on the screening and counseling by the Atomic  ... 
doi:10.1016/j.jsgi.2004.01.003 fatcat:jbez7qxze5e5vk5qjv62e4pldy

Scientific Program Committee

2005 Journal of the Society for Gynecologic Investigation  
It is used for high-resolution material analysis like hydrogen microscopy or material modification as well as radiobiological experiments.  ...  An upgrade of SNAKE to a single-ion cell irradiation facility was completed 2 years ago and successfully tested and is now routinely used for radiobiological experiments.  ...  Part of this study was financially supported by the Budget for Nuclear Research of the Ministry of Education, Culture, Sports, Science and Technology, based on the screening and counseling by the Atomic  ... 
doi:10.1177/1933719105012s203 fatcat:huismlrurnbr5gnadzmfd4hmtu
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