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Systems Biology Markup Language (SBML) Level 3 Package: Distributions, Version 1, Release 1
2020
Journal of Integrative Bioinformatics
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The Systems Biology Markup Language (SBML) Level 3 Core specification does not include an explicit mechanism to include inexact or stochastic values in a model, but it does provide a mechanism for SBML ...
The SBML Distributions package for SBML Level 3 adds the necessary features to allow models to encode information about the distribution and uncertainty of values underlying a quantity. ...
model using SBML Level 3 Version 1 and this 9 version of the Distributions package: 10 11 <? ...
doi:10.1515/jib-2020-0018
pmid:32750035
fatcat:b7qouaimvnfctk2tukti76mjry
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core
2018
Journal of Integrative Bioinformatics
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This document provides the specification for Version 2 of SBML Level 3 Core. ...
The Systems Biology Markup Language (SBML) is a file format for representing computational models in a declarative form that different software systems can exchange. ...
Acknowledgments 1 The development of SBML was originally funded by the Japan Science and Technology Agency (JST) under ...
doi:10.1515/jib-2017-0081
pmid:29522418
fatcat:qcedcbjwlrhbjllcyz7afacbbq
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core
2010
Nature Precedings
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Notifications of new releases are broadcast on the mailing list sbml-announce@sbml.org The latest release of the SBML Level 3 Version 1 Core specification is available at ...
Corrections and other changes to this SBML language specification may appear over time. ...
in the SBML file.
1 . 1 The modular nature of SBML Level 3 Version 1 Core means that data that in SBML Level 2 could only 40 be stored in annotations may now be supported using a full SBML Level 3 package ...
doi:10.1038/npre.2010.4959.1
fatcat:rcwt3kprijabhcyjusdehuts3a
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core
2015
Journal of Integrative Bioinformatics
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This document provides the specification for Version 1 of SBML Level 3 Core. ...
The Systems Biology Markup Language (SBML) is a file format for representing computational models in a declarative form that can be exchanged between different software systems. ...
(Germany), the University of Heidelberg (Germany), the European Molecular Biology Laboratory's European Bioinformatics Institute (UK), the Molecular ...
doi:10.2390/biecoll-jib-2015-266
pmid:26528564
pmcid:PMC5451324
fatcat:5ynhdioiubhhznpnftlv667aom
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core
2010
Nature Precedings
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Notifications of new releases are broadcast on the mailing list sbml-announce@sbml.org The latest release of the SBML Level 3 Version 1 Core specification is available at ...
Corrections and other changes to this SBML language specification may appear over time. ...
in the SBML file.
1 . 1 The modular nature of SBML Level 3 Version 1 Core means that data that in SBML Level 2 could only 40 be stored in annotations may now be supported using a full SBML Level 3 package ...
doi:10.1038/npre.2010.4959
fatcat:jxmfygtfrnchlhhgokdi2rtns4
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core
2018
Journal of Integrative Bioinformatics
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This document provides the specification for Release 2 of Version 1 of SBML Level 3 Core. ...
The Systems Biology Markup Language (SBML) is a file format for representing computational models in a declarative form that different software systems can exchange. ...
Level 3 Version 1 58 Core, but the identifiers are available for possible use by SBML Level 3 packages. ...
doi:10.1515/jib-2017-0080
fatcat:xlg2o5uarrhizeili4asdxujae
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core
2015
Journal of Integrative Bioinformatics
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The file type is application/pdf.
This document provides the specification for Version 1 of SBML Level 3 Core. ...
The Systems Biology Markup Language (SBML) is a file format for representing computational models in a declarative form that can be exchanged between different software systems. ...
in the SBML file.
1 . 1 The modular nature of SBML Level 3 Version 1 Core means that data that in SBML Level 2 could only 40 be stored in annotations may now be supported using a full SBML Level 3 package ...
doi:10.1515/jib-2015-266
fatcat:agyvbsnlwvhkxkk4dtslsmilxq
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2
2019
Journal of Integrative Bioinformatics
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This document provides the specification for Release 2 of Version 2 of SBML Level 3 Core. ...
The Systems Biology Markup Language (SBML) is a file format for representing computational models in a declarative form that different software systems can exchange. ...
Acknowledgments 1 The development of SBML was originally funded by the Japan Science and Technology Agency (JST) under ...
doi:10.1515/jib-2019-0021
pmid:31219795
pmcid:PMC6798823
fatcat:dvpppkkxdjfndcwf3qxhstc2km
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core (Release 1 Candidate)
2010
Nature Precedings
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Notifications of new releases are broadcast on the mailing list sbml-announce@sbml.org The latest release of the SBML Level 3 Version 1 Core specification is available at ...
Corrections and other changes to this SBML language specification may appear over time. ...
The modular nature of SBML Level 3 Version 1 Core means that data that in SBML Level 2 could only be stored in annotations may now be supported using a full SBML Level 3 package. ...
doi:10.1038/npre.2010.4123
fatcat:vzwadsu2hzayzf7542h7zddsty
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core (Release 1 Candidate)
2010
Nature Precedings
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A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2017; you can also visit the original URL.
The file type is application/pdf.
Notifications of new releases are broadcast on the mailing list sbml-announce@sbml.org The latest release of the SBML Level 3 Version 1 Core specification is available at ...
Corrections and other changes to this SBML language specification may appear over time. ...
The modular nature of SBML Level 3 Version 1 Core means that data that in SBML Level 2 could only be stored in annotations may now be supported using a full SBML Level 3 package. ...
doi:10.1038/npre.2010.4123.1
fatcat:wwzvuqymdjck5chu5u53thzcr4
Systems Biology Markup Language (SBML) Level 2: Structures and Facilities for Model Definitions
2007
Nature Precedings
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-2/version-3/ This release of the specification is available at http://sbml.org/specifications/sbml-level-2/version-3/release-1/ The list of known issues in all releases of SBML Level 2 Version 3 is available ...
Notifications of new releases are broadcast on the mailing list sbml-announce@sbml.org The latest release of the SBML Level 2 Version 3 specification is available at http://sbml.org/specifications/sbml-level ...
or attributes in the SBML namespace that are not 21 defined in this SBML Level 2 Version 3 Release 1 specification. ...
doi:10.1038/npre.2007.58.1
fatcat:mgdu7fr4wjgprmo4nksfuihiji
Systems Biology Markup Language (SBML) Level 2: Structures and Facilities for Model Definitions
2008
Nature Precedings
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-2/version-4/ This release of the specification is available at http://sbml.org/specifications/sbml-level-2/version-4/release-1/ The list of known issues in all releases of SBML Level 2 Version 4 is available ...
Notifications of new releases are broadcast on the mailing list sbml-announce@sbml.org The latest release of the SBML Level 2 Version 4 specification is available at http://sbml.org/specifications/sbml-level ...
in the instance of the Section 6 now includes these qualifiers.
7 • Since the time that SBML Level 2 Version 3 Release 2 was issued, the Systems Biology Ontology 8 (SBO) underwent reorganization and ...
doi:10.1038/npre.2008.2715.1
fatcat:nlbdkuhuu5bozgtpzfofadmequ
Systems Biology Markup Language (SBML) Level 2: Structures and Facilities for Model Definitions
2007
Nature Precedings
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The file type is application/pdf.
-2/version-3/ This release of the specification is available at http://sbml.org/specifications/sbml-level-2/version-3/release-1/ The list of known issues in all releases of SBML Level 2 Version 3 is available ...
Notifications of new releases are broadcast on the mailing list sbml-announce@sbml.org The latest release of the SBML Level 2 Version 3 specification is available at http://sbml.org/specifications/sbml-level ...
or attributes in the SBML namespace that are not 21 defined in this SBML Level 2 Version 3 Release 1 specification. ...
doi:10.1038/npre.2007.58.2
fatcat:fpm75djjxjcwlcd3ogkbvbjjpq
Evolving a lingua franca and associated software infrastructure for computational systems biology: the Systems Biology Markup Language (SBML) project
2004
IEE Proceedings - Systems Biology
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Over the last four years, our team has been developing the Systems Biology Markup Language (SBML) in collaboration with an international community of modellers and software developers. ...
The systems biology field needs agreed-upon information standards if models are to be shared, evaluated and developed cooperatively. ...
We developed the Systems Biology Markup Language (SBML) in an effort to address these problems. ...
doi:10.1049/sb:20045008
pmid:17052114
fatcat:643mmve5avaoroecfrbx43t2xm
Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions
2015
Journal of Integrative Bioinformatics
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The file type is application/pdf.
The Systems Biology Markup Language (SBML) is a file format for representing computational models in a declarative form that can be exchanged between different software systems. ...
This document provides the specification for Version 5 of SBML Level 2. ...
Acknowledgments The development of SBML was originally funded entirely by the Japan Science and Technology Agency (JST) under the ERATO Kitano Symbiotic Systems Project during the years . ...
doi:10.2390/biecoll-jib-2015-271
pmid:26528569
pmcid:PMC5457286
fatcat:vx6dfed6xnam3plmtngauwd3ei
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