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Synchronized navigation and comparative analyses across Ensembl complete bacterial genomes with INSYGHT

Thomas Lacroix, Sylvie Thérond, Marc Rugeri, Pierre Nicolas, Annie Gendrault, Valentin Loux, Jean-François Gibrat
<span title="2015-11-24">2015</span> <i title="Oxford University Press (OUP)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/wmo54ba2jnemdingjj4fl3736a" style="color: black;">Bioinformatics</a> </i> &nbsp;

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https://web.archive.org/web/20180728082549/https://watermark.silverchair.com/btv689.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAb8wggG7BgkqhkiG9w0BBwagggGsMIIBqAIBADCCAaEGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMV-kf-7DnhxsrE3BNAgEQgIIBci86xK5dfuDdzktLITmiUOGwqwBwah88xG04oSHOreQLQ8lCoF0I7E9VH-r6HHwXi82uyT-7IIaRJf-srCV5_9ch_lVATkkbQANaER3XiveLqGAXOCylUbRC2HPpt4Jnv0waxl-uS17caTAgeeVXmEPlHHRnKTA2BDSA87-zQF3rNeFvLkdxPyxp8qVh5nRBexVuNwigJ2cycBgz2cW-P12vTM3CdZhQy6ukwib4ALuajVLZ4EU2STwGnvloppLSWfXr9DKN40L8ysmzqNnMcVMvyEEtTKL979RY8qu5cKPrnXun-3Lhpck22fsW5Vu0gdnwSXzA7NRPIqtgivpflR236qOish3IN-M8xqJGBw6f6c8ONZTHiVUEvwjB-BmtUT6VD8d-RV_6UoebN3NHxhxjH5ILASJ2IGXI8XW7H9G6r4qqJDf1HeFdM5XGYeuF1NfYzdP7qhtplY2jdBlIGvyEA9zEVH6rVo2xDYfGXUn3_M0

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Results: Insyght is a comparative visualization tool whose core features combine a synchronized navigation across genomic data of multiple organisms with a versatile interoperability between complementary  ...  In this work, we have greatly increased the scope of the Insyght public dataset by including 2688 complete bacterial genomes available in Ensembl thus vastly improving its phylogenetic coverage.  ...  Acknowledgements The authors would like to thank the IDRIS-CNRS user support team for the help with the computations on the E-biothon BlueGene/P machine and the MIGALE platform for providing computer resources  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/bioinformatics/btv689">doi:10.1093/bioinformatics/btv689</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/26607491">pmid:26607491</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC4896367/">pmcid:PMC4896367</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/42xtsjwqcvewjdix26ymrycbce">fatcat:42xtsjwqcvewjdix26ymrycbce</a> </span>
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Citation

Thomas Lacroix, Sylvie Thérond, Marc Rugeri, Pierre Nicolas, Annie Gendrault, Valentin Loux, Jean-François Gibrat. "Synchronized navigation and comparative analyses across Ensembl complete bacterial genomes with INSYGHT." Bioinformatics 32.7 (2015) 1083-1084