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Preface
2015
Natural Computing
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If the final results are defined by only taking the terminal strings out of the designated output node, then for these extended hybrid networks of evolutionary processors only four nodes are needed in ...
The paper ''Computational completeness of complete, star-like, and linear hybrid networks of evolutionary processors with a small number of processors'', by Artiom Alhazov, Rudolf Freund, Vladimir Rogozhin ...
doi:10.1007/s11047-015-9535-0
fatcat:mdo7er3frfcpjb35eux6dgn2le
Abstracts of Doctor Habilitatus Thesis
2013
Computer Science Journal of Moldova
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] networks of evolutionary processors, Maximal and minimal parallelism and asynchronous mode. ...
Structure of the thesis: 1 ...
nodes in the computationally complete networks of evolutionary processors. ...
doaj:1977f6cd2d7c4a2b94efde02c79b757c
fatcat:kcqre6g4q5a5fhur5llxpkrjqi
Static and dynamic configurable systems
1999
IEEE transactions on computers
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This paper describes four applications in the domain of configurable computing, considering both static and dynamic systems, including: SPYDER (a reconfigurable processor development system), RENCO (a ...
Within the domain of configurable computing, we distinguish between two modes of configurability: staticÐwhere the configurable processor's configuration string is loaded once at the outset, after which ...
This work was supported in part by Grant 2000-049349.96 from the Swiss National Science Foundation and by a grant from the Werner Steiger Foundation.. ...
doi:10.1109/12.773792
fatcat:veobfjyhrvhzvltz5z5c2nkmre
Molecular computing: the lock-key paradigm
1992
Computer
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This article discusses how these mechanisms can combine to yield networks that perform useful computational functions. ...
M olecular computing as a technological field is in an early -but rapidstage of development. Primitive prototypes are beginning to appear. ...
Acknowledgment The preparation of this article was partially supported by Grant No. ECS-9109860 from the US National Science Foundation. ...
doi:10.1109/2.166400
fatcat:hogtx7ykerep5av7q3wxgn634u
DNA as a vehicle for the self-assembly model of computing
1998
Biosystems (Amsterdam. Print)
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A DNA version of the self-assembly model of computing, feasible using currently available laboratory techniques, is proposed. ...
Different input signal patterns are thus represented as DNA duplexes with distinctly different conformational dynamics, in particular different equilibria of B and Z DNA. ...
In principle, it would be possible to construct a network of conformational processors that would be programmable at the interpretative level and that would therefore have general powers of computation ...
doi:10.1016/s0303-2647(97)00062-2
pmid:9492955
fatcat:ufl7hfsy5bbzdpmhhd3nhuh6ae
Framework of an evolutionary design system incorporating design information and history
2001
Computers in industry (Print)
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Current CAD systems are powerful in representing the shape of a product, but they do not carry the design information that has been used or created in designing the product. ...
We propose an integrated design system to enable the storage and usage of design information in addition to shape manipulation. ...
Acknowledgements This work was supported by the Turbo and Power Machinery Research Center in the Institute of Advanced Machinery and Design, Daewoo Heavy Industries and BK21. ...
doi:10.1016/s0166-3615(01)00075-6
fatcat:25eu2i6zuzaxpow46lueh6xetu
Efficient Task Scheduling Approach Relevant to the Hardware/Software Co-Design of Embedded System
2000
Journal of Computing and Information Technology
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As hardware/software co-design of embedded systems has been enabled by advances in computer technologies, reprogrammable hardware can be used to implement a co-processor to perform most of the kernel functions ...
In this paper, a complex scheduling approach, which takes into account advantages of evolutionary computation (i.e., neurocomputing and genetic search and optimization) is presented. ...
Acknowledgement The author gratefully acknowledges the contributions of Professor Jim E. Cooling. ...
doi:10.2498/cit.2000.03.03
fatcat:ldm5tasw5feqrbrvo3shbnnsq4
The parallelism motifs of genomic data analysis
2020
Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences
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2020 pre-print arXiv:2001.06989v1 fatcat:g7fxlvoinrghdbunsccqh5sdx4
We consider several problems in high-performance genomics analysis, including alignment, profiling, clustering and assembly for both single genomes and metagenomes. ...
We identify some of the common computational patterns or 'motifs' that help inform parallelization strategies and compare our motifs to some of the established lists, arguing that at least two key patterns ...
For example, Darwin [62] is a co-processor specifically designed to perform fast all-to-all long read overlapping and alignment in the context of assembly. ...
doi:10.1098/rsta.2019.0394
pmid:31955674
fatcat:kzujmq5u2refvhoovtb2ap5vha
Hardware solutions for evolutionary robotics
[chapter]
1998
Lecture Notes in Computer Science
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Despite the importance of keeping in mind the hard constraints of operating with physical robots, simulations still play an important role in evolutionary robotics for at least two sets of reasons: ...
Finally, we shall address the issue of monitoring and analysis of evolved robotic controllers. Between Simulation and Real World Evolutionary robotics has its roots in simulations. ...
Acknowledgements The authors wish to thank Edo Franzi and Andr e Guignard for important contributions in the design of the hardware components described above. ...
doi:10.1007/3-540-64957-3_69
fatcat:jxrfotw7s5dqthj2gzunifmt7e
Parallel and Distributed Genetic Algorithm with Multiple-Objectives to Improve and Develop of Evolutionary Algorithm
2016
International Journal of Advanced Computer Science and Applications
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In this paper, we argue that the timetabling problem reflects the problem of scheduling university courses, So you must specify the range of time periods and a group of instructors for a range of lectures ...
to check a set of constraints and reduce the cost of other constraints ,this is the problem called NP-hard, it is a class of problems that are informally, it's mean that necessary operations to solve ...
interconnection networks [4] , [11] . ...
doi:10.14569/ijacsa.2016.070524
fatcat:6m3coa6yizgzrhnlsgzqeseb5m
A STUDY OF BIOINFORMATICS APPLICATIONS AND MULTICORE ARCHITECTURE
2019
International Journal of Engineering Applied Sciences and Technology
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Genetic Algorithm is most popular type of evolutionary method and its basic goal is to find out the best optimum result in any given problem. ...
In this field, genetic algorithm plays an important role when it comes to the enlargement and improvement such as prediction of RNA secondary structure. ...
The actual assembly of the amino acids in their proper sequence is the translation which takes place in the cytoplasm of a cell. ...
doi:10.33564/ijeast.2019.v04i02.015
fatcat:gltddcgm4rg2fpnnkz5wf6gite
Artificial Chemistries—A Review
2001
Artificial Life
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evolution of organizations in general. ...
Furthermore, artificial chemistries have a broad application range of practical problems as shown in this review. 2 ...
This work was originally inspired by the workshop "The right stuff" of the ALIFE VI conference, where several of the challenging questions were raised. ...
doi:10.1162/106454601753238636
pmid:11712956
fatcat:yny422rn4ff6dmlca7s5ayuok4
Another expert system rule inference based on DNA molecule logic gates
2013
Photonics Applications in Astronomy, Communications, Industry, and High-Energy Physics Experiments 2013
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With the help of silicon industry microfluidic processors were invented utilizing nano membrane valves, pumps and microreactors. ...
The main part of this work includes the concept of logic gates based on typical genetic engineering reactions. ...
Wasiewicz [11, 13] also proposed the evolutionary programming of logic function graphs, the evaluation of which is based on PCR. Figure 5. ...
doi:10.1117/12.2032392
fatcat:ctao4i3dijcxdeooijxra7huaq
Assembling genomes on large-scale parallel computers
2007
Journal of Parallel and Distributed Computing
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We report the partitioning of more than 1.6 million fragments of over 1.25 billion nucleotides total size into genomic islands in under 2 h on 1024 processors of an IBM BlueGene/L supercomputer. ...
In this paper, we present the first massively parallel genome assembly framework. ...
We are grateful to the anonymous reviewers for commenting on an earlier version of this manuscript. This research was supported in part by NSF Grants CNS-0521568 and DBI-0527192, and an IBM Ph.D. ...
doi:10.1016/j.jpdc.2007.05.014
fatcat:2uzkxv7tkze6tb5bhvh7fo6swu
Assembling genomes on large-scale parallel computers
2006
Proceedings 20th IEEE International Parallel & Distributed Processing Symposium
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We report the partitioning of more than 1.6 million fragments of over 1.25 billion nucleotides total size into genomic islands in under 2 h on 1024 processors of an IBM BlueGene/L supercomputer. ...
In this paper, we present the first massively parallel genome assembly framework. ...
We are grateful to the anonymous reviewers for commenting on an earlier version of this manuscript. This research was supported in part by NSF Grants CNS-0521568 and DBI-0527192, and an IBM Ph.D. ...
doi:10.1109/ipdps.2006.1639259
dblp:conf/ipps/KalyanaramanESA06
fatcat:yufjb6ql6bg6lmbv663oe2gipq
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