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SeMPI: a genome-based secondary metabolite prediction and identification web server

Paul F. Zierep, Natàlia Padilla, Dimitar G. Yonchev, Kiran K. Telukunta, Dennis Klementz, Stefan Günther
<span title="2017-04-27">2017</span> <i title="Oxford University Press (OUP)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/hfp6p6inqbdexbsu4r7usndpte" style="color: black;">Nucleic Acids Research</a> </i> &nbsp;
Here, we introduce SeMPI, a web server providing a prediction and identification pipeline for natural products synthesized by polyketide synthases of type I modular.  ...  The web server of the pipeline (SeMPI) is freely available at: http://www.pharmaceuticalbioinformatics.de/sempi.  ...  ACKNOWLEDGEMENTS We thank Simon Nicklaus, Michael Kaiser and Lea Purschke for assistance in testing and refinement of the prediction pipeline. Furthermore, we would like to thank Robert A.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/nar/gkx289">doi:10.1093/nar/gkx289</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/28453782">pmid:28453782</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5570227/">pmcid:PMC5570227</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/kr5tzd2rdjawvax6jjtrmpureq">fatcat:kr5tzd2rdjawvax6jjtrmpureq</a> </span>
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SeMPI 2.0—A Web Server for PKS and NRPS Predictions Combined with Metabolite Screening in Natural Product Databases

Paul F. Zierep, Adriana T. Ceci, Ilia Dobrusin, Sinclair C. Rockwell-Kollmann, Stefan Günther
<span title="2020-12-29">2020</span> <i title="MDPI AG"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/ie7tehbfsfhs5pdyyt2rrdmnpm" style="color: black;">Metabolites</a> </i> &nbsp;
Additionally, the SeMPI v2 web server provides features that can help to further investigate a submitted gene cluster, such as the incorporation of a genome browser, and the possibility to modify a predicted  ...  Microorganisms produce secondary metabolites with a remarkable range of bioactive properties.  ...  Cofactors in Enzymes" for constructive criticism and examination of the web server.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3390/metabo11010013">doi:10.3390/metabo11010013</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/33383692">pmid:33383692</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ilnt746ycndlrorrc5f4ajjwyu">fatcat:ilnt746ycndlrorrc5f4ajjwyu</a> </span>
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