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Scientific evolutionary pathways: Identifying and visualizing relationships for scientific topics

Yi Zhang, Guangquan Zhang, Donghua Zhu, Jie Lu
2017 Journal of the Association for Information Science and Technology  
Methodology of Scientific Evolutionary Pathways This paper proposes a method for composing a science map that identifies and visualizes the evolutionary relationships of scientific activities.  ...  Whereas traditional science maps emphasize citation statistics and static relationships, this paper presents a term-based method to identify and visualize the evolutionary pathways of scientific topics  ...  We are also indebted to Dr Alan Porter at the Georgia Institute of Technology for his valuable suggestions and insights, and to the three anonymous referees for their comments, criticisms, and suggestions  ... 
doi:10.1002/asi.23814 fatcat:beqj7couivhctbr57smw53rguq

An Evolutionary Game Theory Model of Spontaneous Brain Functioning

Dario Madeo, Agostino Talarico, Alvaro Pascual-Leone, Chiara Mocenni, Emiliano Santarnecchi
2017 Scientific Reports  
Acknowledgements The content of this paper is solely the responsibility of the authors and does not necessarily represent the official views of Harvard Catalyst, Harvard University and its affiliated academic  ...  topic. fMRI Data Preprocessing.  ...  Evolutionary game theory and network response to perturbation. Two distinct lesions to the default mode, dorsal attention and visual networks have been simulated using the EGN-B model.  ... 
doi:10.1038/s41598-017-15865-w pmid:29167478 pmcid:PMC5700053 fatcat:flpvn2ck7ndatmsxmspaqjzqou

The space of genotypes is a network of networks: implications for evolutionary and extinction dynamics

Pablo Yubero, Susanna Manrubia, Jacobo Aguirre
2017 Scientific Reports  
And if this is the case, which are the implications of this structure for population dynamics?  ...  A combination of analytical and numerical techniques to characterize complex networks and population dynamics on such networks permits to derive several quantitative relationships between the topology  ...  (g,h) Visualization of communities A and B and all connector links for τ = 55 (just before the critical value c τ marked with arrows in (a,b)).  ... 
doi:10.1038/s41598-017-14048-x pmid:29062002 pmcid:PMC5653773 fatcat:gdedtubjcbfvbjsyinv2js4eq4

Getting Started in Biological Pathway Construction and Analysis

Ganesh A Viswanathan, Jeremy Seto, Sonali Patil, German Nudelman, Stuart C Sealfon, Olga Troyanskaya
2008 PLoS Computational Biology  
GAV, JS, SP, GN, and SCS wrote the paper. Funding. Our pathway research is supported by US National Institutes of Health NIAID contract HHSN2662000500021C.  ...  center for Protein Sequences; OPHID, Online Predicted Human Interaction Database; PANTHER, Protein Analysis through Evolutionary Relationship database; PID, The Pathway Interaction Database; STKE, Signal  ...  Its visualization and layout tools facilitate pathway analysis.  ... 
doi:10.1371/journal.pcbi.0040016 pmid:18463709 pmcid:PMC2323403 fatcat:dldyxs5cdbabpbf23srfddtbye

A Cross-Grade Study Validating the Evolutionary Pathway of Student Mental Models in Electric Circuits

Jing-Wen Lin
2017 Eurasia Journal of Mathematics, Science and Technology Education  
Lin (Lin, 2006; Lin, Chiu, & Hsu, 2006) proposed a cladistics approach in conceptual evolution to construct a hypothetical Conceptual Evolution Tree (CET; also called Evolutionary Pathway of Student Mental  ...  The CET graph in electric circuits well explains the relationship between student conceptual evolution from Grade 1 to 9 and the curriculum influences by comparing to the empirical data.  ...  ACKNOWLEDGMENTS The author would like to acknowledge the Ministry of Science and Technology in Taiwan for its financial support in completing this study (grant number MOST 103-2628-S-259-001-MY2).  ... 
doi:10.12973/eurasia.2017.00707a fatcat:vwps4mfuxvbxzpgtwc7he5cewa

Advanced Technology Evolution Pathways of Nanogenerators: A Novel Framework Based on Multi-Source Data and Knowledge Graph

Yufei Liu, Guan Wang, Yuan Zhou, Yuhan Liu
2022 Nanomaterials  
On the other hand, the progressive evolutionary process from scientific grants to academic papers and then to patents was not considered.  ...  Then, by calculating the similarity between clusters of different layers, the evolutionary pathways of advanced technology from grants to papers and then to patents is drawn.  ...  K-Means for Clustering and LDA for Topic Extracting K-means is an unsupervised clustering algorithm, which identifies clusters 𝐶 = 𝐶 , 𝐶 , ⋯ , 𝐶 based on square error minimization for the given sample  ... 
doi:10.3390/nano12050838 pmid:35269326 pmcid:PMC8912809 fatcat:bibmt7uaobgrvad3x3uigistf4

Prediction Correction Topic Evolution Research for Metabolic Pathways of the Gut Microbiota

Li Ning, Peng Lifang, He Huixin
2020 Frontiers in Molecular Biosciences  
A total of 1,271 abstracts (from 2006 to 2020) were retrieved from MEDLINE with the query on "gut microbiota" and "metabolic pathway."  ...  We also conclude from the data that, three other topics could be heavily focused in the future: metabolomics-based approach and SCFAs (topic 6), obesity (topic 8) and brain reaction and cardiovascular  ...  In recent years, scholars in the field of microbiology and molecular biosciences have used the LDA model and its improved algorithm to identify scientific research topics and applied it to intelligence  ... 
doi:10.3389/fmolb.2020.600720 pmid:33425992 pmcid:PMC7793741 fatcat:3urrnyg7t5g7djg6hep7jklsqi

A hybrid method to trace technology evolution pathways: a case study of 3D printing

Ying Huang, Donghua Zhu, Yue Qian, Yi Zhang, Alan L. Porter, Yuqin Liu, Ying Guo
2017 Scientometrics  
Results show how our method offers technical insights and traces technology evolution pathways, and then help decision-makers guide technology development.  ...  In this paper, we apply co-classification analysis to reveal the technical evolution process of a certain technical field, using co-word analysis to extract implicit or unknown patterns and topics, and  ...  The findings and observations contained in this paper are those of the authors and do not necessarily reflect the views of the supporters.  ... 
doi:10.1007/s11192-017-2271-8 fatcat:k67mz627f5bqhj5nl5zq2ej5au

Pathways over Time: Functional Genomics Research in an Introductory Laboratory Course

Todd D. Reeves, Douglas M. Warner, Larry H. Ludlow, Clare M. O'Connor, James Hewlett
2018 CBE - Life Sciences Education  
The Pathways over Time project is designed to be sustainable and readily adapted to other institutional settings. †  ...  Statistical analyses indicated that content knowledge growth was larger for underrepresented minority students and that growth in content knowledge, but not research skills, varied by course section.  ...  The pathway involved in Met synthesis in S. cerevisiae ( Figure 2 ) is easy for students to visualize, because Met is one of only two sulfur-containing amino acids.  ... 
doi:10.1187/cbe.17-01-0012 pmid:29326101 pmcid:PMC6007769 fatcat:xrwckxpa2rh3leowhsvu77d7he

The neural pathway midline crossing theory: a historical analysis of Santiago Rámon y Cajal's contribution on cerebral localization and on contralateral forebrain organization

Carla Mora, Carlos Velásquez, Juan Martino
2019 Neurosurgical Focus  
The crossing of the tactile and motor pathways occurred posteriorly as a compensatory mechanism to allow the cortical integration of the sensory, motor, and visual functions.  ...  Throughout history, many scientists have wondered about the reason for neural pathway decussation in the CNS resulting in contralateral forebrain organization.  ...  Ricardo Martínez Murillo and the Cajal Institute, "Cajal Legacy," Spanish National Research Council (CSIC), Madrid, Spain, for helping with the copyrighted images.  ... 
doi:10.3171/2019.6.focus19341 pmid:31473669 fatcat:hvgweya6ireybglgev6dbxinby

Transition pathways to fully automated driving and its implications for the sociotechnical system of automobility

Eva Fraedrich, Sven Beiker, Barbara Lenz
2015 European Journal of Futures Research  
We will extrapolate different scenarios of automated driving based on current technical, economic, infrastructural, spatial, and transport developments and discuss its consequences for the transport system  ...  In our paper, we will discuss the topic in relation to three possible sociotechnical transition scenarios: (1) evolution, (2) revolution and (3) transformation.  ...  Acknowledgments We would like to thank the Daimler and Benz foundation for funding part of the study.  ... 
doi:10.1007/s40309-015-0067-8 fatcat:evn7paryizhyxbycwejw4kb6ci

Discovering and forecasting interactions in big data research: A learning-enhanced bibliometric study

Yi Zhang, Ying Huang, Alan L. Porter, Guangquan Zhang, Jie Lu
2018 Technological forecasting & social change  
A learning process is used to enhance the ability to identify the interactive relationships between topics in sequential time slices, revealing technological evolution and death.  ...  This paper uses a learning-enhanced bibliometric study to discover interactions in big data research by detecting and visualizing its evolutionary pathways.  ...  The use of scientific evolutionary pathways provides a solution to identify the predecessor and descendants of technological topics, which can help understand the evolutionary relationships among sub-technologies  ... 
doi:10.1016/j.techfore.2018.06.007 fatcat:nytutu5zrfbgrnnsex5elqhky4

Technology Student Characteristics: Course Taking Patterns as a Pathway to STEM Disciplines

Eun Sook Kim, Richard Westberry
2015 Journal of Technology Education  
for secondary education.  ...  The handbooks are intended to serve as reference documents for public and private education agencies, schools, early childhood centers, and other educational institutions, as well as by researchers involved  ...  Botany Botany courses provide students with an understanding of plants, their life cycles, and their evolutionary relationships.  ... 
doi:10.21061/jte.v27i1.a.1 fatcat:x5e272ldz5etda4t6lfh3o6lrm

The ESF Programme on Functional Genomics Workshop on 'Data Integration in Functional Genomics: Application to Biological Pathways'

Pierre-Alain Binz, Henning Hermjakob, Paul van der Vet
2004 Comparative and Functional Genomics  
We report from the second ESF Programme on Functional Genomics workshop on Data Integration, which covered topics including the status of biological pathways databases in existing consortia; pathways as  ...  part of bioinformatics infrastructures; design, creation and formalization of biological pathways databases; generating and supporting pathway data and interoperability of databases with other external  ...  Acknowledgements We would like to thank Mike Taussig and Annette Martin for their support in the organization of the workshop.  ... 
doi:10.1002/cfg.389 pmid:18629067 pmcid:PMC2447351 fatcat:ofc5szxnljdjjbb6qbbeepkqlm

Variance analysis and handling of Clinical Pathway: An overview of the state of knowledge

Gang Du, Liyuan Huang, Mengwei Zhou
2020 IEEE Access  
Clinical pathway is a multi-disciplinary treatment plan and work mode, which is favorable for improving healthcare service quality and reducing medical costs.  ...  Moreover, this paper conducts a bibliometric analysis to visualize the clinical pathway variance research.  ...  Her research interests include clinical pathway variance modeling and business analysis. VOLUME 8, 2020  ... 
doi:10.1109/access.2020.3020151 fatcat:pe54rtkionfopgz6awtkx7kuzu
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