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Phenotype annotation with the ontology of microbial phenotypes (OMP)

Deborah A. Siegele, Sandra A. LaBonte, Peter I-Fan Wu, Marcus C. Chibucos, Suvarna Nandendla, Michelle G. Giglio, James C. Hu
2019 Journal of Biomedical Semantics  
Microbial genetics has formed a foundation for understanding many aspects of biology.  ...  Each phenotype annotation is stored as a TableEdit row associated with a specific TableEdit table on a genotype page.  ...  Likewise, if a change occurs in the underlying DNA sequence of an organism, creating a new genotype, a change in the phenotype may be observed.  ... 
doi:10.1186/s13326-019-0205-5 pmid:31307550 pmcid:PMC6631659 fatcat:n4vj7j45ebe4pmn7dxd6bgfaom

The Unfolded Protein Response: A Novel Therapeutic Target for Poor PrognosticBRAFMutant Colorectal Cancer

Nicholas Forsythe, Alaa Refaat, Arman Javadi, Hajrah Khawaja, Jessica-Anne Weir, Heba Emam, Wendy L. Allen, Frank Burkamp, Vlad Popovici, Puthen V. Jithesh, Claudio Isella, Melissa J. Labonte (+3 others)
2018 Molecular Cancer Therapeutics  
These analyses identified the unfolded protein response (UPR) as a novel and druggable pathway associated with the BRAFMT colorectal cancer subgroup with poorest outcome.  ...  Taken together, our findings indicate that oncogenic BRAF induces chronic ER stress and that inducers of acute ER stress could be a novel treatment strategy for poor prognostic BRAFMT colorectal cancer  ...  A. B. Oncogenic T1 T2 T3 T1 T2 T3 T1 T2 T3 T1 T2 T3 Vehicle GRP78: a key regulator of viability in BRAFMT CRC cells.  ... 
doi:10.1158/1535-7163.mct-17-0603 pmid:29483217 pmcid:PMC5985931 fatcat:upraqoxysvempemiesxmbnxzka

Plasma Amino Acids vs Conventional Predictors of Insulin Resistance Measured by the Hyperinsulinemic Clamp

Cherise C. Labonte, Samaneh Farsijani, Errol B. Marliss, Réjeanne Gougeon, José A. Morais, Sandra Pereira, Maya Bassil, Aaron Winter, Jessica Murphy, Terry P. Combs, Stéphanie Chevalier
2017 Journal of the Endocrine Society  
Data suggest a sex-specific regulation of AA metabolism by excess adiposity, particularly the BCAAs, warranting investigation.  ...  The main outcome measures were the glucose disposal (M/I) index (using 3-[ 3 H]-glucose) during a hyperinsulinemic-euglycemic clamp and whole-body protein turnover (using 1-[ 13 C]-leucine).  ...  103 6 26 d 107 6 26 c 101 6 15 c,d 87 6 23 d Trp a 51 6 12 46 6 11 50 6 11 41 6 10 40 6 7 4 16 10 Val a,b 221 6 25 235 6 24 237 6 30 190 6 24 c 200 6 28 c,d 214 6 22 d Total EAAs a 946  ... 
doi:10.1210/js.2016-1108 pmid:29264537 pmcid:PMC5686697 fatcat:rbe7op4rlzbind7dvtt3kv5jla

Bacteria-to-human protein networks reveal origins of endogenous DNA damage [article]

Jun Xia, Li-Ya Chiu, Ralf B Nehring, Maria Angelica Bravo Nunez, Qian Mei, Mercedes Perez, Yin Zhai, Devon M Fitzgerald, John P Pribis, Yumeng Wang, Chenyue W Hu, Reid T Powell (+22 others)
2018 bioRxiv   pre-print
We discover a large network of DDPs in Escherichia coli and deconvolute them into six DNA-damage-causing function clusters, demonstrating DDP mechanisms in three: reactive-oxygen increase by transmembrane  ...  of a 177 network.  ...  BWA-MEM Li, 2013 N/A deepTools Ramirez et al., 2014 N/A MOSAiCS Sun et al., 2013 N/A Rockhopper McClure et al., 2013 N/A Prism GraphPad https://www.graphpad.com/scientific- software/prism  ... 
doi:10.1101/354589 fatcat:ps4puncperebdiji4n2ivqrz64

Crowdsourcing biocuration: the Community Assessment of Community Annotation with Ontologies (CACAO) [article]

Jolene Ramsey, Brenley McIntosh, Daniel Renfro, Suzanne A. Aleksander, Sandra LaBonte, Curtis Ross, Adrienne E. Zweifel, Nathan Liles, Shabnam Farrar, Jason J. Gill, Ivan Erill, Sarah Ades (+36 others)
2021 bioRxiv   pre-print
Over a ten-year history, our community contributors have spurred changes to the ontology not traditionally covered by professional biocurators.  ...  The CACAO principle of relying on community members to participate in and shape the future of biocuration in GO is a powerful and scalable model used to promote the scientific enterprise.  ...  GM089636 to J.C.H.) and the National Science Foundation (awards EF-0949351 and DBI-1565146 to J.C.H.) and support for teaching space was provided by the Department of Biochemistry & Biophysics at Texas A&  ... 
doi:10.1101/2021.04.30.440339 fatcat:ni6k25anrnb7nlfgkqp46tlixq

Page 3 of Le Journal Canadien Des Techniques en Radiation Medicale Vol. 4, Issue 1 [page]

1973 Le Journal Canadien Des Techniques en Radiation Medicale  
Welton Sharla Schofield Ronald A. Searle Nancy A. Edwards lona Charlotte Gore Douglas A. Boufford Sandra Gail Ratzlaff Gary Thomas Posmituck Darlene Faye Kowaluk Debbie S.  ...  Holwell Douglas A.  ... 

Page 64 of Le Journal Canadien Des Techniques en Radiation Medicale Vol. 1, Issue 1 [page]

1970 Le Journal Canadien Des Techniques en Radiation Medicale  
Forbes 9195 Sandra Holder 9196 Jane A. Stewart 9197 Marie Vezina 9198 Florence R. MacDonald 9199 Cecilia T. Murillo 9200 Alieda Ten Van Dyke 9201 Garry W.  ...  Ogilvie 9324 Elvera A. Kirk $940 Glenna J. Zetaruk 9325 Frances C; Warren Nucléographie 9185 Sheila Laurie 9339 Connie Puhach ONTARIO Radiographie 9088 Dwight L. Wageman 9089 Sandra E.  ... 

RODERICK H^IG-BROWN Articles Review Articles and Reviews A QUARTERLY OF CRITICISM AND R€VI€W

W Keith, Ellen Warwick, Louise Nelson-Vanhee, Gary Ross, Leona Gom, Peter Baltensperger, Rene Labonte, Sherill Grace, Ralph Gustafson, Tom Marshall, Anne Corkett, Miriam Waddington (+13 others)
unpublished
L'ESPACE INTERIEUR CHEZ R1NGUET René LabontêA PERSONNALITÉ d'un romancier se révèle de bien des façons à travers son oeuvre: par exemple, par ses interventions dans le ràcit, son attitude face à ses  ...  WE HAVE ONLY FAIRLY re- Sandra Djwa By Great Waters: A Newfoundland and Labrador Anthology, edited by Peter Neary and Patrick O'Flaherty. University of Toronto Press.  ...  The third discusses "Cohen as Literary Phenomenon", and this group of more sub-stantial studies contains pieces by Stephen Scobie, Frank Davey, Patricia Morley, Douglas Barbour, and Sandra Djwa, and ranges  ... 
fatcat:v6p2yri4jvc45dpbu5qn5cmjna

Page 2424 of Psychological Abstracts Vol. 81, Issue 5 [page]

1994 Psychological Abstracts  
K., 17710 Kury, Helmut, 17936 Kurylo, Daniel D., 18241 Kurz, 18226 Kurzweil, Nancy, 17455 Kushner, Matt G., 17590 Kastner, Ernst, 18781 Kutash, Krista, 18942 Kyle, Beverly, 18910 Kyuma, Kazuo, 19811 LaBonte  ...  A 1633).  ... 

Page 5327 of Psychological Abstracts Vol. 81, Issue 11 [page]

1994 Psychological Abstracts  
M., 40134 Lee, Martha J., 43089 Lee, Merideth G., 39918 Lee, Moonkyu, 43375 Lee, Sandra L., 41062 Lee, Tong, 43431 Lee, W.  ...  ., 41902 Kwas, Michelle, 39807 Ladavas, Elisabetta, a6 Labonte, Ronald, 42572 Laborit, Henri, 41157 Labouvie, Erich W., 41584 LaCelle-Peterson, Mark W., 43061 Lach, Denise H., 43336 Lach, Helen W., 42573  ... 

Page 5354 of Psychological Abstracts Vol. 82, Issue 11 [page]

1995 Psychological Abstracts  
M., 41524 Leavitt, Rebecca S., 41246 Lea-Wood, Sandra 3 42155 — William G., 39463, 39464, Lebovici, Serge, 40104 LeBow, Michael, —- LeBuffe, Paul A., 39417 LeCompte, Denny C., 39593, 39612 Lee, Alison,  ...  S., 40547 Kyst, Ebbe, 41884 Laan, Ellen, 40288 Laarni, Jari, 39504 Laben, Joyce K., 41344 Labonté, Francoys, 39505 Labrecque, Denise, 40339 Lacayo, Alvaro, 40789 Lachman, Margie E., 41574 Lachmann, Thomas  ... 

Health promotion, advocacy and health inequalities: a conceptual framework

S. Carlisle
2000 Health Promotion International  
This paper concludes that advocacy for health fulfils two functions: as a form of practice and as a useful strategy for a discipline which has to be self-promoting as well as health-promoting in order  ...  Advocacy has often been described as a key strategy for the achievement of health promotion aims, but multiple and conflicting definitions and usages exist.  ...  Health promotion, advocacy and health inequalities: a conceptual framework SANDRA CARLISLE INTRODUCTION As the above quotation implies, health promotion is arguably one of the most ambitious healthrelated  ... 
doi:10.1093/heapro/15.4.369 fatcat:emftdypwbjh3nnroaafdajmmya

Page 2549 of Psychological Abstracts Vol. 86, Issue 6 [page]

1999 Psychological Abstracts  
A., 16496 Kotrschal, Kurt, 16757 Kouli, Olga, 19449 Kounios, John, 16642 Kouritzin, Sandra G., 17167 Koutrelakos, James, 17670 Kovarsky, Dana, 17594, 19117 Kowal, Sabine, 17158 Kowalik, S., 18118 Kowalik  ...  Elise E., 18795 Labonte, Ronald, 18869 Labouvie-Vief, Gisela, 17424 Labrador, Francisco J., 18329 Lackie, Paula, 19253 Lackstrom, Jan B., 18628 Lacy, Barbara A., 19436 Ladany, Nicholas, 19155 Ladd, Elisabeth  ... 

Page 2936 of Psychological Abstracts Vol. 89, Issue 7 [page]

2002 Psychological Abstracts  
J., 22437 Lehman, Darrin R., 21733 Lehmkuhl, Gerd, 21492 Lehr, Ron, 22335 Lehrer, Paul M., 21260 Lehrer, Paul, 21750 Leiblum, Sandra R., 21775 prea ensd Harold, 19634 Leman, Patrick J., i Lemke, Jay L  ...  Y. , 20613 Laaksonen, M., 21810 Laasonen, Marja, 21185 LaBauve, Bill J. , 22183 Labo, Ibraim, 19781 Labonte, Ronald, 21869 LaBrie, Joseph, 20954 LaChappelle, Kacie, 22064 Lachowicz, Jean E. , 19871 Lacritz  ... 

Page 4127 of Psychological Abstracts Vol. 89, Issue 10 [page]

2002 Psychological Abstracts  
K., 31362 Lehmann, Olivia, 29494 Lehrer, Rich, 31537 Lehrmann, Jon A., 30640 Lehtonen, Kimmo, 31099 Leiblum, Sandra, 28922 Leigh, R.  ...  Bahati, 29791 Kwak, Nohoon, 28986 Kwon, Jun Soo, 31018 Kwon, Oh Nam, 31568 Kye, Sarah L., 30595 Kyomen, Helen H., 31172 Kytta, Marketta, 29713 La Spada, Albert R., 29324 La Violette, Alyce, 30935 Labonté  ... 
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