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SPOT: Open Source framework for scientific data repository and interactive visualization [article]

Faruk Diblen, Jisk Attema, Rena Bakhshi, Sascha Caron, Luc Hendriks, Bob Stienen
<span title="2018-09-20">2018</span> <i > arXiv </i> &nbsp; <span class="release-stage" >pre-print</span>
SPOT is an open source and free visual data analytics tool for multi-dimensional data-sets. Its web-based interface allows a quick analysis of complex data interactively.  ...  It follows FAIR principles to allow reuse and comparison of the published data-sets. The software also support PostgreSQL database for scalability.  ...  SPOT aims to be the first tool to provide an intuitive interface for visualizing high-dimensional data-sets and as a place for researcher to store their high-dimensional data.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1809.08893v1">arXiv:1809.08893v1</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/gz5227znbfasrpikgreja6ibxi">fatcat:gz5227znbfasrpikgreja6ibxi</a> </span>
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spot: Open Source framework for scientific data repository and interactive visualization

Faruk Diblen, Jisk Attema, Rena Bakhshi, Sascha Caron, Luc Hendriks, Bob Stienen
<span title="">2019</span> <i title="Elsevier BV"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/xayqhkyjsncwvogxxusqncax6q" style="color: black;">SoftwareX</a> </i> &nbsp;
spot is an open source and free visual data analytics tool for multi-dimensional data-sets. Its web-based interface enables user to do a quick and interactive analysis of complex data.  ...  It follows FAIR principles to allow reuse and comparison of the published data-sets.  ...  high-dimensional data-sets and as a place for researcher to store their high-dimensional data.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.softx.2019.04.006">doi:10.1016/j.softx.2019.04.006</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/lcqormywpbcjlez5h7olfo5ohu">fatcat:lcqormywpbcjlez5h7olfo5ohu</a> </span>
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Shedding Light on Blind Spots: Developing a Reference Architecture to Leverage Video Data for Process Mining [article]

Wolfgang Kratsch, Fabian Koenig, Maximilian Roeglinger
<span title="2021-10-22">2021</span> <i > arXiv </i> &nbsp; <span class="release-stage" >pre-print</span>
In recent years, numerous methods have been proposed for analyzing structured process data.  ...  Yet, in many cases, it is only the digitized parts of processes that are directly captured from process-aware information systems, and manual activities often result in blind spots.  ...  data itself (e.g., producing three-dimensional shapes from two-dimensional image data [46] ).  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/2010.11289v2">arXiv:2010.11289v2</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/acdpo2mznjbztoww7h7pvvj5ma">fatcat:acdpo2mznjbztoww7h7pvvj5ma</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20201024170224/https://arxiv.org/ftp/arxiv/papers/2010/2010.11289.pdf" title="fulltext PDF download [not primary version]" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <span style="color: #f43e3e;">&#10033;</span> <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/0c/6e/0c6e7a812524c295dfa7385b3cfd5225c526459b.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/2010.11289v2" title="arxiv.org access"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> arxiv.org </button> </a>

Environmental justice in the age of big data: challenging toxic blind spots of voice, speed, and expertise

Alice Mah
<span title="2016-10-05">2016</span> <i title="Informa UK Limited"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/edptahlg2nbzxhh5esubgaddy4" style="color: black;">Environmental Sociology</a> </i> &nbsp;
I would also like to thank Thom Davies, Cynthia Wang, and Gurminder Bhambra for their feedback on earlier drafts. Notes on contributor  ...  Acknowledgements I would like to thank the editors of this special issue, Kelly Joyce and Laura Senier, and to the anonymous reviewers for their useful comments.  ...  The data generated through this project used big data techniques of collection and dissemination, including the development of an online visualization tool using open source software.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1080/23251042.2016.1220849">doi:10.1080/23251042.2016.1220849</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/mjw2fkyftbfnjpvwwhzs6r7r6m">fatcat:mjw2fkyftbfnjpvwwhzs6r7r6m</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180720022801/http://wrap.warwick.ac.uk/82014/1/WRAP_Environmental%20justice%20in%20the%20age%20of%20big%20data%20challenging%20toxic%20blind%20spots%20of%20voice%20speed%20and%20expertise.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/8b/65/8b6598a36a063bea6cfdf37c89f52a9ca6cfa73c.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1080/23251042.2016.1220849"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> tandfonline.com </button> </a>

Detecting and Visualizing Observation Hot-Spots in Massive Volunteer-Contributed Geographic Data across Spatial Scales Using GPU-Accelerated Kernel Density Estimation

Guiming Zhang
<span title="2022-01-12">2022</span> <i title="MDPI AG"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/fw2uac7a5jggbfgqwh2wqy7yxu" style="color: black;">ISPRS International Journal of Geo-Information</a> </i> &nbsp;
to expanding the toolbox for geospatial big data analytics.  ...  This research exemplifies a computational tool that is supported by high-performance computing and capable of efficiently detecting and visualizing multi-scale hot-spots in geospatial big data and contributes  ...  Acknowledgments: The author thanks the iNaturalist project for making its data freely available for research and the many nature observers for contributing species observations to iNaturalist.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3390/ijgi11010055">doi:10.3390/ijgi11010055</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/unnlhz26rncb7a2r26bphk2aua">fatcat:unnlhz26rncb7a2r26bphk2aua</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20220428192141/https://mdpi-res.com/d_attachment/ijgi/ijgi-11-00055/article_deploy/ijgi-11-00055-v2.pdf?version=1642073068" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/1a/59/1a59a8685d85a44b7971c78e4342a149c499cc4d.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3390/ijgi11010055"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> mdpi.com </button> </a>

Void spot assay procedural optimization and software for rapid and objective quantification of rodent voiding function, including overlapping urine spots

Kyle Allen Wegner, Lisa L Abler, Steven Royal Oakes, Guneet S Mehta, K. Elaine Ritter, Warren G. Hill, Bernadette M.M. Zwaans, Laura E Lamb, Zunyi Wang, Dale E. Bjorling, William A Ricke, Jill Macoska (+4 others)
<span title="2018-07-04">2018</span> <i title="American Physiological Society"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/dw2557x55ncq3dxazgeranldcy" style="color: black;">AJP - Renal Physiology</a> </i> &nbsp;
. diabetic mice; free open-source software; urinary dysfunction; void spot assay; voiding behavior  ...  Here, we describe development and multi-institutional validation of a new tool for objective, consistent, and rapid analysis of mouse void spot assay (VSA) data.  ...  However, arbitrarily removing small spots from downstream analyses reduces data dimensionality and potentially obscures im- Fig. 10 .  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1152/ajprenal.00245.2018">doi:10.1152/ajprenal.00245.2018</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/29972322">pmid:29972322</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC6230749/">pmcid:PMC6230749</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ignlnde7frhqpjziy3dagweyty">fatcat:ignlnde7frhqpjziy3dagweyty</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200506194814/https://journals.physiology.org/doi/pdf/10.1152/ajprenal.00245.2018" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/53/a1/53a1571f37c8484f24b4ea43668ad47e8c526c4c.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1152/ajprenal.00245.2018"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6230749" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Spot urine collection: A valid alternative to total urine collection for metabolomic studies in dairy cattle

H. Boudra, P. Noziere, G. Cantalapiedra-Hijar, M. Traikia, J-F. Martin, M. Petera, M. Lagree, M. Doreau, D.P. Morgavi
<span title="2021-11-08">2021</span> <i title="American Dairy Science Association"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/da6efw7r3zgdvmwhsvq3uvg6ma" style="color: black;">Journal of Dairy Science</a> </i> &nbsp;
When considering nitrogen levels in the diet, the robustness and precision for discriminating high- and low-nitrogen diets was equally achieved with both sampling techniques.  ...  In this study, we investigated whether spot urine collection is a practical alternative to total collection for metabolomic studies in lactating cows.  ...  Data Processing The MS data were converted to NetCDF format using 3.4 Datanalysis software (Bruker Biospin), and MS data from untargeted approach were processed using the open-source web-based interface  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3168/jds.2021-20788">doi:10.3168/jds.2021-20788</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/34763916">pmid:34763916</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ohsqyeyiszexbn3jroiwom5kv4">fatcat:ohsqyeyiszexbn3jroiwom5kv4</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20220301213537/https://hal.inrae.fr/hal-03485359/file/PIIS0022030221009978.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/6e/68/6e68a3479381aa941f298d3fe63897882e26bd73.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3168/jds.2021-20788"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> Publisher / doi.org </button> </a>

Evaluating hot spot-ridge interaction in the Atlantic from regional-scale seismic observations

James B. Gaherty, Robert A. Dunn
<span title="">2007</span> <i title="American Geophysical Union (AGU)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/7h4lalujvjdp3d7nn3adrvs3ky" style="color: black;">Geochemistry Geophysics Geosystems</a> </i> &nbsp;
In comparison, the Reykjanes lithosphere is too slow to result purely from half-space cooling of a high-temperature mantle source.  ...  Mean shear velocity profiles correlate with apparent hot spot flux: lithosphere formed near the low-flux Ascension hot spot is characterized by high mantle velocities, while the MAR near the higher-flux  ...  GSN, HOTSPOT, and MIDSEA data were collected from the IRIS Data Management System (http:// www.iris.edu).  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1029/2006gc001533">doi:10.1029/2006gc001533</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/idogt7vqbbb7tambtmgj5ytbkq">fatcat:idogt7vqbbb7tambtmgj5ytbkq</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170420125633/http://www.ldeo.columbia.edu:80/~gaherty/Publications_files/gaherty_dunn_g3_2007.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/a5/10/a510273afc617d6e8f4f999fa8fcdc930f628834.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1029/2006gc001533"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

High-sensitivity nanophotonic sensors with passive trapping of analyte molecules in hot spots

Xianglong Miao, Lingyue Yan, Yun Wu, Peter Q. Liu
<span title="2021-01-05">2021</span> <i title="Springer Science and Business Media LLC"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/y5icnkvcrncrdfvhmtw3bdbma4" style="color: black;">Light: Science &amp; Applications</a> </i> &nbsp;
Therefore, delivery of the majority of, if not all, analyte molecules to hot spots is crucial for fully utilizing the sensing capability of an optical sensor.  ...  The enhanced signal is mainly contributed by molecules in photonic hot spots, which are regions of a nanophotonic structure with high-field intensity.  ...  X.M. conducted numerical simulations, device fabrication, analyte solution preparation, and infrared spectroscopic measurements.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1038/s41377-020-00449-7">doi:10.1038/s41377-020-00449-7</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/33402668">pmid:33402668</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/fqktwjuzfra2bgobcpoah77y7m">fatcat:fqktwjuzfra2bgobcpoah77y7m</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210429054247/https://www.nature.com/articles/s41377-020-00449-7.pdf?error=cookies_not_supported&amp;code=ab111c35-c410-49f3-8112-98862aaa8656" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/ae/0a/ae0a7d0bc233e942eea8d16c251c3afa4f8fb3cd.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1038/s41377-020-00449-7"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> Publisher / doi.org </button> </a>

Prospects for plasmonic hot spots in single molecule SERS towards the chemical imaging of live cells

Darya Radziuk, Helmuth Moehwald
<span title="">2015</span> <i title="Royal Society of Chemistry (RSC)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/knc3mgis4rdntku3ubqh4roxhu" style="color: black;">Physical Chemistry, Chemical Physics - PCCP</a> </i> &nbsp;
") for an analyte detection.  ...  enhanced Raman scattering (SM-SERS) is a highly local effect occurring at sharp edges, interparticle junctions and crevices or other geometries with a sharp nanoroughness of plasmonic nanostructures ("hot spots  ...  Acknowledgements We thank the Max Planck Society and the Deutsche Forschungsgemeinschaft for the financial support.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1039/c4cp04946b">doi:10.1039/c4cp04946b</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/25619814">pmid:25619814</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/lroowh3rczhylk4zqmglq26muu">fatcat:lroowh3rczhylk4zqmglq26muu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190307065905/http://pdfs.semanticscholar.org/dca1/971a019b8b122286dbdb2aa4795a29de0303.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/dc/a1/dca1971a019b8b122286dbdb2aa4795a29de0303.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1039/c4cp04946b"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

MQ: Tool for HR-AM Based Quantitative Analysis for Direct MS Workflow [article]

Avinash Ghanate, Dharmeshkumar Parmar, Nivedita Bhattacharya, Ijaz Inamdar, Gayatri Phadke, Venkateswarlu Panchagnula
<span title="2020-01-20">2020</span> <i title="Cold Spring Harbor Laboratory"> bioRxiv </i> &nbsp; <span class="release-stage" >pre-print</span>
Herein, the capabilities and features of 'MQ', a common platform developed to support quantitative analysis from HRMS data are described.  ...  There is an increased interest in using high-resolution mass spectrometry (HRMS) in the full scan mode (FS) for simultaneous qualitative and quantitative analysis with accurate mass based extracted ion  ...  Anu Raghunathan for providing mammalian cell culture medium solutions for LC-HRMS based quantitative analysis.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1101/2020.01.19.912055">doi:10.1101/2020.01.19.912055</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/alvokiyjgff5tdzzggyq2vw5uq">fatcat:alvokiyjgff5tdzzggyq2vw5uq</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200323200858/https://www.biorxiv.org/content/biorxiv/early/2020/01/20/2020.01.19.912055.full.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/41/42/4142a56eadf93c4279590ab3df34d1a272beb0e3.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1101/2020.01.19.912055"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> biorxiv.org </button> </a>

SACHER Project

Silvia Bertacchi, Isam Mashhour Al Jawarneh, Fabrizio Ivan Apollonio, Gianna Bertacchi, Michele Cancilla, Luca Foschini, Costantino Grana, Giuseppe Martuscelli, Rebecca Montanari
<span title="">2018</span> <i title="ACM Press"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/nltptcgwlraohmsrkrpbfpcyl4" style="color: black;">Proceedings of the 4th EAI International Conference on Smart Objects and Technologies for Social Good - Goodtechs &#39;18</a> </i> &nbsp;
The SACHER project provides a distributed, open source and federated cloud platform able to support the life-cycle management of various kinds of data concerning tangible Cultural Heritage.  ...  data from heterogeneous sources.  ...  In order to interactively display 3D objects, SACHER 3D CH is enhanced with 3D Heritage Online Presenter (3DHOP) [11] , an open-source library for the creation of interactive Web presentations of high-resolution  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1145/3284869.3284871">doi:10.1145/3284869.3284871</a> <a target="_blank" rel="external noopener" href="https://dblp.org/rec/conf/goodtechs/BertacchiJABCFG18.html">dblp:conf/goodtechs/BertacchiJABCFG18</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/e3c7nyfhh5aa3f5zvwhouugrzy">fatcat:e3c7nyfhh5aa3f5zvwhouugrzy</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200306102709/https://iris.unimore.it/retrieve/handle/11380/1169296/208313/SACHER_Project.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/82/c0/82c07b213bbdc333f7d4e2eb4d4a1ceeffd8fad9.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1145/3284869.3284871"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> acm.org </button> </a>

RPPAML/RIMS: A metadata format and an information management system for reverse phase protein arrays

Romesh Stanislaus, Mark Carey, Helena F Deus, Kevin Coombes, Bryan T Hennessy, Gordon B Mills, Jonas S Almeida
<span title="">2008</span> <i title="Springer Nature"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/n5zrklrhlzhtdorf4rk4rmeo3i" style="color: black;">BMC Bioinformatics</a> </i> &nbsp;
The RIMS platform was designed to interoperate with other data analysis and data visualization tools such as Cytoscape.  ...  As with other high-throughput technologies, substantial amounts of analytical data are generated. Over 1000 samples may be printed on a single nitrocellulose slide.  ...  Authors would also like to thank Becky Partida for editing the manuscript.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/1471-2105-9-555">doi:10.1186/1471-2105-9-555</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/19102773">pmid:19102773</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC2639439/">pmcid:PMC2639439</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/vsray42dqjfupizuoyi37ywt3y">fatcat:vsray42dqjfupizuoyi37ywt3y</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170830114227/https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-9-555?site=http://bmcbioinformatics.biomedcentral.com" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/8e/c0/8ec0114ab71fd52481ab698ecce7583d15e2acdc.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/1471-2105-9-555"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> springer.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2639439" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Big Data Systems Meet Machine Learning Challenges: Towards Big Data Science as a Service [article]

Radwa Elshawi, Sherif Sakr
<span title="2017-09-21">2017</span> <i > arXiv </i> &nbsp; <span class="release-stage" >pre-print</span>
Cloud computing represents a practical and cost-effective solution for supporting Big Data storage, processing and for sophisticated analytics applications.  ...  We analyze in details the building blocks of the software stack for supporting big data science as a commodity service for data scientists.  ...  R 26 is currently considered as the defacto standard in statistical and data analytics research. It is the most popular open source and cross platform software which has very wide community support.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1709.07493v1">arXiv:1709.07493v1</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ja7rrbfk7vhnpjvqadlr5vvhyy">fatcat:ja7rrbfk7vhnpjvqadlr5vvhyy</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200911042323/https://arxiv.org/pdf/1709.07493v1.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/9b/6a/9b6aa0f9e45c1a43f117a674d2d15966a1940cbd.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1709.07493v1" title="arxiv.org access"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> arxiv.org </button> </a>

Modern Scientific Visualizations on the Web

Loraine Franke, Daniel Haehn
<span title="2020-09-24">2020</span> <i title="MDPI AG"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/x7fwifzpv5bljlhjn7g4qri7ni" style="color: black;">Informatics</a> </i> &nbsp;
Modern scientific visualization is web-based and uses emerging technology such as WebGL (Web Graphics Library) and WebGPU (Web Graphical Processing Unit)for three-dimensional computer graphics and WebXR  ...  As part of this analysis, we introduce the Scientific Visualization Future Readiness Score (SciVis FRS) to rank visualizations for a technology-driven disruptive tomorrow.  ...  [76] applied their open science platform SPOT on multidimensional data sets, for instance, on a data set for dark matter models.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3390/informatics7040037">doi:10.3390/informatics7040037</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/2xfkzuv4ybdw3hxzn5ym7slgsa">fatcat:2xfkzuv4ybdw3hxzn5ym7slgsa</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200926051546/https://res.mdpi.com/d_attachment/informatics/informatics-07-00037/article_deploy/informatics-07-00037.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/6f/9b/6f9be525c574e348ead93bb1bd7fad7e44789a65.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3390/informatics7040037"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> mdpi.com </button> </a>
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