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SPARQL: Semantic Information Retrieval by Embedding Prepositions
2014
International journal of network security and its applications
The above representation leads to a data set which needs to be queried using software agents, machines. W3C has recommended SPARQL to be the de facto query language for RDF. ...
An RDF data source primarily consist of data that is represented in the form of a Triple pattern which has an appropriate RDF syntax and further results into an RDF Graph .The RDF repository stores the ...
The agents can a part of the SPARQL engine itself which can interpret Non-RDF datasets to be RDF data sets only for the purpose of query. ...
doi:10.5121/ijnsa.2014.6105
fatcat:jnb4dp3m3jhclpnz5zgnag7sbe
StatSpace: A Unified Platform for Statistical Data Exploration
[chapter]
2016
Lecture Notes in Computer Science
., a metadata repository, URI design patterns, and supporting services -and demonstrates the usefulness of the resulting Linked Data infrastructure by means of use case examples. ...
StatSpace transparently lifts data from raw sources, maps geographical and temporal dimensions, aligns value ranges, and allows users to explore and integrate the previously isolated data sets. ...
Alternatively, data sets can be converted into RDF at query time. As a result, users can explore up-to-date data at query time. ...
doi:10.1007/978-3-319-48472-3_50
fatcat:353tnuzimbdoljgko6uxfmk2jm
Using SPARQL to Query BioPortal Ontologies and Metadata
[chapter]
2012
Lecture Notes in Computer Science
This endpoint can be queried with SPARQL which opens new usage scenarios for the biomedical domain. ...
Ontology repositories act as a gateway for users who need to find ontologies for their applications. ...
This work was supported by the National Center for Biomedical Ontology, under grant U54 HG004028 from the National Institutes of Health. ...
doi:10.1007/978-3-642-35173-0_12
fatcat:ooklwzs3xff3vjwujrrav35bpu
Towards Versioning of Arbitrary RDF Data
2016
Proceedings of the 12th International Conference on Semantic Systems - SEMANTiCS 2016
We argue that such a system needs support for all concepts of the RDF specification including support for RDF datasets and blank nodes. ...
In this paper, we introduce an RDF versioning approach as a foundation for a full featured RDF Version Control System. ...
For this reason, we now only consider previous work introducing version control for RDF repositories (triple or quad stores) and therefore supporting query languages like SPARQL to query and update the ...
doi:10.1145/2993318.2993327
dblp:conf/i-semantics/FrommholdPATPM16
fatcat:dxqxhms755dgpiwvcbdxhzhb5y
NLIMED: Natural Language Interface for Model Entity Discovery in Biosimulation Model Repositories
2022
Frontiers in Physiology
This grounding in RDF provides the flexibility to enable searching for entities within models (e.g., variables, equations, or entire models) by utilizing the RDF query language SPARQL. ...
For this purpose, the COmputational Modeling in BIology NEtwork (COMBINE) community recommends the use of the Resource Description Framework (RDF). ...
These queries to the SPARQL converter are the most similar to Natural Language Interface for Model Entity Discovery (NLIMED); however, they are less suitable for exploring RDF in biosimulation models that ...
doi:10.3389/fphys.2022.820683
pmid:35283794
pmcid:PMC8908213
fatcat:tduvlpjyp5bdlbqvcr6glw6kzq
Model annotation and discovery with the Physiome Model Repository
2019
BMC Bioinformatics
Based on a semantic query, this tool will help users discover relevant models, suggesting similar or alternative models that the user may wish to explore or use. ...
These annotated models are freely available in the Physiome Model Repository (PMR). ...
Thanks to Sean Matheny at the Center for eResearch for his cooperation to setup our tool and service in Center for eResearch at the University of Auckland and Nectar.
Authors' contributions ...
doi:10.1186/s12859-019-2987-y
pmid:31492098
pmcid:PMC6731580
fatcat:3xkut5ct3rappdu6enuvad4khm
Improving Open Science Using Linked Open Data: CONICET Digital Use Case
2019
Journal of Computer Science and Technology
Finally, we show some examples of queries that answer questions that initially CONICET Digital does not allow ...
The conversion and publication process is guided by the methodological guidelines for publishing government linked data. ...
In RDF, the SPARQL query language [8] works on graphs and allows queries of greater scope and complexity. A user can perform searches in several repositories, from a SPARQL endpoint. ...
doi:10.24215/16666038.19.e05
fatcat:74qk7nszqvekfdwoz3ztxxy4gm
Introducing Fedora Repositories
2015
Zenodo
Fedora is a flexible, extensible repository platform for the management and dissemination of digital content. ...
Finally, attendees will participate in a hands-on session that will give them a chance to install, configure, and explore Fedora 4 by following step-by-step instructions. ...
RELS-EXT, RELS-INT) to RDF properties • Web applications can take advantage of Converting Inline XML and/or XML datastreams via a standardized SPARQL-Query metadata using an RDF-based schema 5. ...
doi:10.5281/zenodo.6512282
fatcat:wkd2u23jzvfvrhcbi7gydwiedu
The Ontop Framework for Ontology Based Data Access
[chapter]
2014
Communications in Computer and Information Science
This virtual graph can then be queried using an RDF query language such as SPARQL [7] . Formally, an OBDA system is a triple O = T , S, M , where: -T is the intensional level of an ontology. ...
-M is a set of mapping assertions, each one of the form • Φ(x) is a query over S, returning tuples of values for x • Ψ (x) is a query over T whose free variables are from x. ...
Using Sesame API OpenRDF Sesame is a de-facto standard framework for processing RDF data and includes parsers, storage solutions (RDF databases a.ka. triplestores), reasoning and querying, using the SPARQL ...
doi:10.1007/978-3-662-45495-4_6
fatcat:77pqwm6dznf5nexppacg2oxfxa
Role of SPARQL in Leveraging Sematic Web Technology
2020
International Journal of Engineering and Advanced Technology
The current work provides the first hand information for dealing with unstructured heterogeneous data residing on web using Twinkle, a Java tool for SPARQL query execution on FOAF (Friend Of A Friend) ...
Currently, most of the web content is in HTML5 format which is a W3C recommendation which enables describing the structure marginally with the help of annotations. ...
SPARQL is the query language of the Semantic web which enables Pulling the data from both structured as well as semi-structured data Data exploration by querying unknown hidden relationships between ...
doi:10.35940/ijeat.c5161.029320
fatcat:ce7sr6wpgzgdffkgu2q47ky3j4
CAPABLE D3.2: Data-related Functionality to Realize a FAIR Infrastructure
2021
Zenodo
This analysis results in recommended implementation decisions for FAIR-enabling functionality. ...
This deliverable analyzes and describes the requirements for establishing an infrastructure for CAPABLE that adheres to the Findability, Accessibility, Interoperability, Reusability (FAIR) Principles, ...
Introduction SPARQL is a W3C (World Wide Web Consortium) recommendation, the current version being SPARQL 1.1 [17] . SPARQL stands for SPARQL Protocol and RDF Query Language. ...
doi:10.5281/zenodo.5005509
fatcat:ixqnzyuilrfsbeegypn25mtvhu
Model Annotation and Discovery with the Physiome Model Repository
[article]
2018
bioRxiv
pre-print
In helping a user to discover relevant models this tool will provide users with suggestions for similar or alternative models they may wish to explore or utilize in their model based on the models they ...
These annotated models are freely available in the Physiome Model Repository (PMR). ...
Thanks to Sean Matheny at the Center for eResearch for his cooperation to setup our tool and service in Center for eResearch at the University of Auckland and Nectar. ...
doi:10.1101/498501
fatcat:miy5t7va5fhttfcf3h5uh3iz2m
A Semantic Web Navigation Tool for Exploring the Henri Poincaré Correspondence Corpus
2021
International Joint Workshop on Semantic Web and Ontology Design for Cultural Heritage
The following Semantic Web technologies have been chosen to represent and to exploit corpus data: the rdf model, the rdfs knowledge representation language and the sparql query language. ...
Recently, the need of an exploration tool for this historical corpus has emerged. ...
We greatly thank Pierre Willaime for his attentive reading of the user documentation. ...
dblp:conf/swodch/LasolleBLNR21
fatcat:rfxuxurvkjbwhbxegoy4d7p6nq
A journey to Semantic Web query federation in the life sciences
2009
BMC Bioinformatics
We have explored a tool called "FeDeRate", which enables a global SPARQL query to be decomposed into subqueries against the remote databases offering either SPARQL or SQL query interfaces. ...
Finally, we have explored how to use the vocabulary of interlinked Datasets (voiD) to create metadata for describing datasets exposed as Linked Data URIs or SPARQL endpoints. ...
Thanks to Ted Bashor (VectorC, LLC) for his help developing the Receptor Explorer. ...
doi:10.1186/1471-2105-10-s10-s10
pmid:19796394
pmcid:PMC2755818
fatcat:ovbiczh3wnajbpqba5byn3f4fq
Clever generation of rich SPARQL queries from annotated relational schema: application to Semantic Web Service creation for biological databases
2013
BMC Bioinformatics
Clever generation of rich SPARQL queries from annotated relational schema: application to Semantic Web Service creation for biological databases. ...
generation of SPARQL queries and their integration into Semantic Web Services backbones. ...
Acknowledgements We would like to acknowledge Isabelle Mougenot and Guilhem Sempere for their assistance. This work was supported by Région Languedoc-Roussillon and CIRAD. ...
doi:10.1186/1471-2105-14-126
pmid:23586394
pmcid:PMC3680174
fatcat:htd6pjkckzdg5dr3lf7koh37fa
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