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A Framework for Exploration and Visualization of SPARQL Endpoint Information

Maria Krommyda
<span title="2020-03-01">2020</span> <i title="Institute for Semantic Computing Foundation"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/uiutxxajszalfo4xpsuriovlqe" style="color: black;">International Journal of Graph Computing</a> </i> &nbsp;
The SPARQL query language alleviates this barrier by facilitating the exploration of this information and many data providers have created dedicated SPARQL endpoints for their data.  ...  SPARQL query results based exclusively on features extracted from the result.  ...  Acknowledgment The experimental analysis presented in Section 6 was supported by Mr. Tara Venkata Sai Rahul Muktineni as part of his Master Project for the University of Ottawa.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.35708/gc1868-126723">doi:10.35708/gc1868-126723</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/nc5n6fwkjne2rofkajcpz4oczu">fatcat:nc5n6fwkjne2rofkajcpz4oczu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200717023441/https://b5589c9e-f1e3-4455-9929-0d78781398a4.filesusr.com/ugd/e49175_184f791cf71f4279bc498928fc3fd86c.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/f3/a8/f3a81f7cd2b56b0596a21082465b898dc71879c7.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.35708/gc1868-126723"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

RIKEN MetaDatabase

Norio Kobayashi, Satoshi Kume, Kai Lenz, Hiroshi Masuya
<span title="">2018</span> <i title="IGI Global"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/w7bkxef3rfcbrfixzvv2ignqf4" style="color: black;">International Journal on Semantic Web and Information Systems (IJSWIS)</a> </i> &nbsp;
Recently, the number and heterogeneity of life science datasets published on the Web have increased significantly.  ...  This paper describes the technical knowledge obtained through the development and operation of the RIKEN MetaDatabase to accelerate life science data distribution.  ...  of class An instance typed by a class Tree view: Shows OWL ontologies as trees based on subclass relationships; • Download view: Used to download RDF data archives for each database; • SPARQL search  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.4018/ijswis.2018010106">doi:10.4018/ijswis.2018010106</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/o3bx674wtrgplb23tumhj3c7ia">fatcat:o3bx674wtrgplb23tumhj3c7ia</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200307043105/https://www.igi-global.com/viewtitle.aspx?TitleId=193932&amp;isxn=9781522542902" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/59/f9/59f98ff5c3b077a581794854c50b3512e3f4337c.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.4018/ijswis.2018010106"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

A journey to Semantic Web query federation in the life sciences

Kei-Hoi Cheung, H Robert Frost, M Scott Marshall, Eric Prud'hommeaux, Matthias Samwald, Jun Zhao, Adrian Paschke
<span title="">2009</span> <i title="Springer Nature"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/n5zrklrhlzhtdorf4rk4rmeo3i" style="color: black;">BMC Bioinformatics</a> </i> &nbsp;
We have explored a tool called "FeDeRate", which enables a global SPARQL query to be decomposed into subqueries against the remote databases offering either SPARQL or SQL query interfaces.  ...  As a community effort, the BioRDF task force, within the Semantic Web for Health Care and Life Sciences Interest Group, is exploring how these emerging approaches can be utilized to execute distributed  ...  This article has been published as part of BMC Bioinformatics Volume 10 Supplement 10, 2009: Semantic Web Applications and Tools for Life Sciences, 2008.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/1471-2105-10-s10-s10">doi:10.1186/1471-2105-10-s10-s10</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/19796394">pmid:19796394</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC2755818/">pmcid:PMC2755818</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ovbiczh3wnajbpqba5byn3f4fq">fatcat:ovbiczh3wnajbpqba5byn3f4fq</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170820160638/http://dspace.mit.edu/bitstream/handle/1721.1/52498/Cheung-2009-A%20journey%20to%20Semanti.pdf?sequence=1" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/18/f8/18f89350edb87bd285546e332bdb43f08508c776.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/1471-2105-10-s10-s10"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> springer.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2755818" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

The LRA Workbench: an IDE for efficient REST API composition through linked metadata

Diego Serrano, Eleni Stroulia
<span title="2021-09-14">2021</span> <i title="Springer Science and Business Media LLC"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/pkhnkszyprhb3orbf6g7tqmgiu" style="color: black;">Journal of Big Data</a> </i> &nbsp;
Our empirical evaluation of the $$LRA_{Wbench}$$ L R A Wbench usability demonstrates that our tool significantly improves the performance of developers formulating SPARQL queries for LRA.  ...  queries.  ...  Consent for publication Not applicable.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/s40537-021-00504-z">doi:10.1186/s40537-021-00504-z</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/okmwyxnwdnfkzgt5mgqzyuf43i">fatcat:okmwyxnwdnfkzgt5mgqzyuf43i</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210925105845/https://journalofbigdata.springeropen.com/track/pdf/10.1186/s40537-021-00504-z.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/80/ec/80ecf70b4bd00dd2f36b4876d44d7aef9b00912e.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/s40537-021-00504-z"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> springer.com </button> </a>

The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies

Toshiaki Katayama, Mark D Wilkinson, Gos Micklem, Shuichi Kawashima, Atsuko Yamaguchi, Mitsuteru Nakao, Yasunori Yamamoto, Shinobu Okamoto, Kenta Oouchida, Hong-Woo Chun, Jan Aerts, Hammad Afzal (+54 others)
<span title="">2013</span> <i title="Springer Nature"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/iasjcyzzyncgnohh3aitx65bhq" style="color: black;">Journal of Biomedical Semantics</a> </i> &nbsp;
BioHackathon 2010 was the third in a series of meetings hosted by the Database Center for Life Sciences (DBCLS) in Tokyo, Japan.  ...  The overall goal of the BioHackathon series is to improve the quality and accessibility of life science research data on the Web by bringing together representatives from public databases, analytical tool  ...  life sciences.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/2041-1480-4-6">doi:10.1186/2041-1480-4-6</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/23398680">pmid:23398680</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC3598643/">pmcid:PMC3598643</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/fm5xaotu3nbafibe3pm3js4d7u">fatcat:fm5xaotu3nbafibe3pm3js4d7u</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180719065651/https://cloudfront.escholarship.org/dist/prd/content/qt3x80x9f7/qt3x80x9f7.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/e9/5d/e95dfa001e23b428e0dbf45524245caeb6189284.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/2041-1480-4-6"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> springer.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3598643" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

The Planarian Anatomy Ontology: A resource to connect data within and across experimental platforms

Stephanie H. Nowotarski, Erin L. Davies, Sofia M. C. Robb, Eric J. Ross, Nicolas Matentzoglu, Viraj Doddihal, Mol Mir, Melainia McClain, Alejandro Sánchez Alvarado
<span title="2021-07-28">2021</span> <i title="The Company of Biologists"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/p74htnr5yvfmxn6hgfmprxrxiq" style="color: black;">Development</a> </i> &nbsp;
Gene Expression database, which allows retrieval of a variety of published transcript/gene expression data associated with PLANA terms.  ...  At publication, PLANA contains over 850 terms describing Smed anatomy from subcellular to system-level across all life cycle stages, in intact animals, and regenerating body fragments.  ...  The Proteǵeŕ esource is funded by NIGMS GM10331601.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1242/dev.196097">doi:10.1242/dev.196097</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/34318308">pmid:34318308</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC8353266/">pmcid:PMC8353266</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/dhtfgac2dbeg5lrha5i2q5efxa">fatcat:dhtfgac2dbeg5lrha5i2q5efxa</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210803220706/https://cob.silverchair-cdn.com/cob/content_public/journal/dev/148/15/10.1242_dev.196097/1/dev196097.pdf?Expires=1631052427&amp;Signature=tXu9lvPFzrQcCy1GkN8IA7F51DwHIcSrchHgczpaQU~Ecgo8C5w2AxgmOe5Wt7-pmbv2bRZaXC~X0ubBnwULBULLRxdMnb~NtgmJSdMagiZ0HuZmQitGoxbyUKbZXSFRd~UUQoBHBosPYKNb1Up1kov5x4kvL0HUvXWPJt4e8-LxGqiO7qgXAkuSMmuNrgCfHcI0pVMvgZeDTDA2Yql1~IJUgtIxrLY~Ca0O2rKoUIXnr-aFUXAvC1dITaOFlOD33WD~8le64RYWkLv0s5gTAkeUSpqiVBeoZu1TaXIT8LSP1i08aY2FFoSBx4AxafMiRMtdHueQHngnB4e9lAw-Uw__&amp;Key-Pair-Id=APKAIE5G5CRDK6RD3PGA" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/ec/d2/ecd2c43999c1b20e0386a2d09da3a846a8750e3f.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1242/dev.196097"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8353266" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

A Novel Knowledge Representation Framework for the Statistical Validation of Quantitative Imaging Biomarkers

Andrew J. Buckler, David Paik, Matt Ouellette, Jovanna Danagoulian, Gary Wernsing, Baris E. Suzek
<span title="2013-04-02">2013</span> <i title="Springer Nature"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/7mxsagdhtrbahmfd6mjpsonp7a" style="color: black;">Journal of digital imaging</a> </i> &nbsp;
facilitates the collaborative development and validation of potential imaging biomarkers by many stakeholders.  ...  We report on our current progress on developing an informatics infrastructure to store, query, and retrieve imaging biomarker data across a wide range of resources in a semantically meaningful way that  ...  Formulate traverses the graph defined by the triples to a roottarget entity (e.g. CTImage)-and leverages the nodes traversed to construct criteria for the query.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1007/s10278-013-9598-3">doi:10.1007/s10278-013-9598-3</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/23546775">pmid:23546775</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC3705009/">pmcid:PMC3705009</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/nkllru5k7fgbhb4bawn6zbllpq">fatcat:nkllru5k7fgbhb4bawn6zbllpq</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170915122924/https://link.springer.com/content/pdf/10.1007%2Fs10278-013-9598-3.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/0a/70/0a70b37de7022961f4a79e1c45faa58dbbdf703f.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1007/s10278-013-9598-3"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> springer.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3705009" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

EMBnet.journal 19 Suppl. B

EMBnet Journal
<span title="2013-10-14">2013</span> <i title="EMBnet Stichting"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/safaaq4uondrvmmn5dstg3qpp4" style="color: black;">EMBnet journal</a> </i> &nbsp;
Fernando Palluzzi for numerous discussions regarding the data model. This work was supported by a PRIN awarded to Prof. Stefano Ceri.  ...  Acknowledgements The OntoGene group is partially supported by the Swiss National Science Foundation (grants 100014-118396/1 and 105315-130558/1).  ...  life sciences workflows for the post-PC era.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.14806/ej.19.b.749">doi:10.14806/ej.19.b.749</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/h6kgq2g4ljbn7jrq6xpkbh2eie">fatcat:h6kgq2g4ljbn7jrq6xpkbh2eie</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180721024625/http://journal.embnet.org/index.php/embnetjournal/article/download/749/1061" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/39/b1/39b1bea270d64c123a456b6fdf05a9827ebfcd6d.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.14806/ej.19.b.749"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

The Planarian Anatomy Ontology: A resource to connect data within and across experimental platforms [article]

Alejandro Sanchez Alvarado, Stephanie Nowotarski, Erin Davies, Sofia Robb, Eric Ross, Nicolas Matentzoglu, Viraj Doddihal, Mol Mir, Melainia McClain
<span title="2020-08-14">2020</span> <i title="Cold Spring Harbor Laboratory"> bioRxiv </i> &nbsp; <span class="release-stage" >pre-print</span>
We created the Planarian Anatomy Ontology (PLANA), an extendable framework of defined Smed anatomical terms organized using relationships.  ...  The most current version contains over 800 terms that describe Smed anatomy from subcellular to system-level across all life cycle stages, in intact animals, and regenerating body fragments.  ...  Modifications were made to import our PAGE 598 specific jnl and to change the name of our blazegraph instance to PAGE. 599 The PAGE webform searches generate SPARQL queries (SPARQL 1.1 Query 600 Language  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1101/2020.08.14.251579">doi:10.1101/2020.08.14.251579</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/rbh3qv6snvcl7gfjkwoibcto6y">fatcat:rbh3qv6snvcl7gfjkwoibcto6y</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20201107145826/https://www.biorxiv.org/content/biorxiv/early/2020/08/14/2020.08.14.251579.full.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/2f/e9/2fe9ebf473b77efee9c419e98fdb1ac7510f59aa.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1101/2020.08.14.251579"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> biorxiv.org </button> </a>

Designing interactive user interface supporting entity search over DBpedia

Fahad Alahmari, Jalel Akaichi, Naif Radi Aljohani, Muhammad Ahtisham Aslam
<span title="">2016</span> <i title="IEEE"> 2016 4th Saudi International Conference on Information Technology (Big Data Analysis) (KACSTIT) </i> &nbsp;
I am grateful to the School of Computer Science and Information Technology, RMIT University, for providing facilities and comfortable research environment.  ...  Special thanks to Daniel Walder and Jake Barnes, for their help to advertise my experiments on a social network.  ...  Summary This chapter undertook a comparative study between two Linked Data query approaches, which are query federation and link traversal, by evaluating a set of SPARQL queries that can be used by technical  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/kacstit.2016.7756070">doi:10.1109/kacstit.2016.7756070</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/4om73ybb4rfshlfnqhdrzn7rdu">fatcat:4om73ybb4rfshlfnqhdrzn7rdu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170813150223/http://researchbank.rmit.edu.au/view/rmit:160797/Alahmari.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/05/08/05085c0612eeaf42c87023da621122b0af07e2eb.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/kacstit.2016.7756070"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> ieee.com </button> </a>

Organizing institutions

<span title="">2016</span> <i title="IEEE"> 2016 10th International Conference on Software, Knowledge, Information Management &amp; Applications (SKIMA) </i> &nbsp;
We thank the organizing committee for their commitment to the success of the event, the authors for their submissions and the program committee for their hard work. Acknowledgements.  ...  This research has also been funded by FAPES/CNPq (PRONEX 52272362/11).  ...  D2R-Server did not provide any function for date and time operations, so we wrote custom Java classes and used it in SPARQL queries.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/skima.2016.7916183">doi:10.1109/skima.2016.7916183</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ctichxcphnhj7ci3h4lu662gbi">fatcat:ctichxcphnhj7ci3h4lu662gbi</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20140330013334/http://ceur-ws.org/Vol-1041/ontobras-2013_completeProc.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/b2/65/b265a7bdf39c5b993b2334bf19d3b2361799666c.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/skima.2016.7916183"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> ieee.com </button> </a>

Organizing institutions

<span title="">2015</span> <i title="IEEE"> 2015 21st International Conference on Automation and Computing (ICAC) </i> &nbsp;
We thank the organizing committee for their commitment to the success of the event, the authors for their submissions and the program committee for their hard work. Acknowledgements.  ...  This research has also been funded by FAPES/CNPq (PRONEX 52272362/11).  ...  D2R-Server did not provide any function for date and time operations, so we wrote custom Java classes and used it in SPARQL queries.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/iconac.2015.7313649">doi:10.1109/iconac.2015.7313649</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/prpaqk2d4bhnlom25xxztiimaq">fatcat:prpaqk2d4bhnlom25xxztiimaq</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20140330013334/http://ceur-ws.org/Vol-1041/ontobras-2013_completeProc.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/b2/65/b265a7bdf39c5b993b2334bf19d3b2361799666c.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/iconac.2015.7313649"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> ieee.com </button> </a>

State Of The Art Analysis Report

Miguel Ángel Esbrí
<span title="2014-05-30">2014</span> <i title="Zenodo"> Zenodo </i> &nbsp;
defining and implementing the different aspects of the FOODIE platform hub for agricultural services.  ...  technologies, architectures and systems developed in other projects, as well as initia-tives and policies and data sources repositories (specially at local, national and European level) which are relevant for  ...  Query operations, such as SORT, JOIN, AGGREGATE, are fully supported by SPARQL and it offers specifically graph traversal syntax for data represented as a graph.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.5281/zenodo.200497">doi:10.5281/zenodo.200497</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/otpyumabc5fbpgqmixtgmt7hli">fatcat:otpyumabc5fbpgqmixtgmt7hli</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200307223421/https://zenodo.org/record/200497/files/D2.1-State-of-the-art-analysis-report-v1.7.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/2e/36/2e365bf973bb037e12c81ca52bf5bab8e0442cf8.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.5281/zenodo.200497"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> zenodo.org </button> </a>

Detecting Design Patterns by Learning Embedded Code Features

Mohamed Hamama
<span title="2021-05-27">2021</span> <i title="figshare"> figshare.com </i> &nbsp;
We create a textual syntactic, semantic, and lexical representation (SSLR) of the Java classes from the Code-Features extracted from a traversed Abstract Syntax Tree.  ...  Some of those approaches use class-related metrics and code features, while others apply the learning techniques to overcome the low performance in detection caused by the variance in design patterns implementations  ...  The director-class constructs the complex object by using the Builder abstract class. The Builder defines steps to create a complex object.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.6084/m9.figshare.14686989.v1">doi:10.6084/m9.figshare.14686989.v1</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/wykzqmsewnd5vo2phtms74etsy">fatcat:wykzqmsewnd5vo2phtms74etsy</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210601224916/https://s3-eu-west-1.amazonaws.com/pfigshare-u-files/28208133/DPDLearningCodeFeatures_MHamama_Msc_Thesis.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/f9/23/f9231315abf555a86164781a021d71b93f387106.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.6084/m9.figshare.14686989.v1"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> figshare.com </button> </a>

Knowledge management for Systems Biology a general and visually driven framework applied to translational medicine

Dieter Maier, Wenzel Kalus, Martin Wolff, Susana G Kalko, Josep Roca, Igor Marin de Mas, Nil Turan, Marta Cascante, Francesco Falciani, Miguel Hernandez, Jordi Villa-Freixa, Sascha Losko
<span title="">2011</span> <i title="Springer Nature"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/xua5vbjwszdirewaoqnikiu5zm" style="color: black;">BMC Systems Biology</a> </i> &nbsp;
Life science has become a data rich science with information about the behaviour of millions of entities like genes, chemical compounds, diseases, cell types and organs, which are organised in many different  ...  From clinical and experimental data, text-mining results and public databases we generate a chronic obstructive pulmonary disease (COPD) knowledge base and demonstrate its use by mining specific molecular  ...  This work was supported by the European Commission (FP6) BioBridge LSHG-CT-2006-037939.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/1752-0509-5-38">doi:10.1186/1752-0509-5-38</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/21375767">pmid:21375767</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC3060864/">pmcid:PMC3060864</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/qtckdk6rbrabvecjbykgyv6gpu">fatcat:qtckdk6rbrabvecjbykgyv6gpu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170830075456/https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/1752-0509-5-38?site=http://bmcsystbiol.biomedcentral.com" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/7f/d0/7fd0d5f69e49fa6fc15dea6c6afc3b6b7baba2ce.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/1752-0509-5-38"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> springer.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3060864" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>
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