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Reusable Model Transformation Components with bentō [chapter]

Jesús Sánchez Cuadrado, Esther Guerra, Juan de Lara
2015 Lecture Notes in Computer Science  
In bentō, a reusable transformation is written as a regular ATL transformation, but it uses concepts as meta-models.  ...  This paper presents bentō, a tool which supports the development and execution of reusable transformation components.  ...  In addition, bentō includes a reverse engineering wizard to convert an existing transformation into a reusable component (see Sec. 5), and a REST-based repository to share components (see Sec. 6).  ... 
doi:10.1007/978-3-319-21155-8_5 fatcat:i5yp7l5lwzes5edduozebycxwy

BENTO: A Visual Platform for Building Clinical NLP Pipelines Based on CodaLab

Yonghao Jin, Fei Li, Hong Yu
2020 Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics: System Demonstrations  
., pre-trained NLP models) and use them in a controlled and reproducible way.  ...  BENTO comes with a number of clinical NLP tools that have been pre-trained using medical notes and expert annotations and can be readily used for various clinical NLP tasks.  ...  Therefore, it is hard to extend applications that use the UIMA framework with new models.  ... 
doi:10.18653/v1/2020.acl-demos.13 pmid:33223604 pmcid:PMC7679080 fatcat:6hj6bocwlzftrkoy4u5x4okuoi

A Component Model for Model Transformations

Jesus Sanchez Cuadrado, Esther Guerra, Juan de Lara
2014 IEEE Transactions on Software Engineering  
To evaluate its reusability potential, we report on a generic transformation component to analyse workflow models through their transformation into Petri nets, which we have reused for eight workflow languages  ...  We have designed a component model for model transformations, supported by an implementation currently targeting the Atlas Transformation Language (ATL).  ...  This work was supported by the Spanish Ministry of Economy and Competitivity with project Go-Lite (TIN2011-24139) and the EU commission with project MONDO (FP7-ICT-2013-10, #611125).  ... 
doi:10.1109/tse.2014.2339852 fatcat:vk4lo7iyrnfhvliayygibmbngm

Reverse Engineering of Model Transformations for Reusability [chapter]

Jesús Sánchez Cuadrado, Esther Guerra, Juan de Lara
2014 Lecture Notes in Computer Science  
In this paper, we automate the reverse engineering of existing transformations into reusable transformation components.  ...  This is achieved by defining reusable components that encapsulate a generic transformation template and expose an interface called concept declaring the structural requirements that any meta-model using  ...  For this purpose, the authors extract the effective meta-model of the transformation as-is, and adapt the meta-model where the transformation is to be reused by making it a subtype of the effective meta-model  ... 
doi:10.1007/978-3-319-08789-4_14 fatcat:q72wo7gbpja75fkzafvmjl3mje

Comparing and classifying model transformation reuse approaches across metamodels

Jean-Michel Bruel, Benoit Combemale, Esther Guerra, Jean-Marc Jézéquel, Jörg Kienzle, Juan de Lara, Gunter Mussbacher, Eugene Syriani, Hans Vangheluwe
2019 Journal of Software and Systems Modeling  
We discuss strengths and weaknesses of each approach, provide a reading grid used to compare their features, compare with community needs, identify gaps in current transformation reuse approaches in relation  ...  Model transformations are essential elements of Model-driven Engineering (MDE) solutions, as they enable the automatic manipulation of models.  ...  We are grateful to all participants in the survey for their support, and to all participants in the 1st workshop on Unifying Software Reuse at Bellairs for their feedback on the feature model.  ... 
doi:10.1007/s10270-019-00762-9 fatcat:rhgd7sdxvzb2rkd5jcdazpznta

BIBFRAME Transformation for Enhanced Discovery

Qiang Jin, Jim Hahn, Gretchen Croll
2016 Library resources & technical services  
With support from an internal innovation grant from the University of Illinois Library at Urbana-Champaign, researchers transformed and enriched nearly 300,000 e-book records in their library catalog from  ...  One result of the grant was the incorporation of BIBFRAME resources within an experimental Bento view of the linked library data for e-books.  ...  a module of Bento-style search results in the BIBFRAME model 9 • enriching the BIBFRAME model with linked data that connected to other open linked data projects • writing a report on issues encountered  ... 
doi:10.5860/lrts.60n4.223 fatcat:4nltbxzrznfcvjemdgjtw6ehja


Johannes Wettinger, Uwe Breitenbücher, Frank Leymann
2016 Services Transactions on Cloud Computing  
Therefore, we present a method in conjunction with a framework and implementation to dynamically generate tailored deployment automation engines for specific application stacks, which are packaged in a  ...  Other options include Flexiant's Bento Boxes 14 and GENTL (Andrikopoulos, 2014) .  ...  The entry point is the design time phase with its initial step to create and maintain an application topology model or a group of related topology models.  ... 
doi:10.29268/stcc.2016.0002 fatcat:p7nd7gx2mfhjpoek7wlkxgjere

Automatic Deployment of Services in the Cloud with Aeolus Blender [chapter]

Roberto Di Cosmo, Antoine Eiche, Jacopo Mauro, Stefano Zacchiroli, Gianluigi Zavattaro, Jakub Zwolakowski
2015 Lecture Notes in Computer Science  
The final deployment is guaranteed to satisfy not only user requirements and relevant software dependencies, but also to be optimal with respect to the number of used virtual machines.  ...  Saloon instead computes a final configuration by describing a cloud application using a feature model extended with feature cardinalities.  ...  Once these pieces of information are entered, Blender translates the description of the Armonic services into the Aeolus component-based model representations used by Zephyrus and Metis.  ... 
doi:10.1007/978-3-662-48616-0_28 fatcat:u7cix3ox75axvkdieqfwn255xa

Using ChEMBL web services for building applications and data processing workflows relevant to drug discovery

Michał M Nowotka, Anna Gaulton, David Mendez, A Patricia Bento, Anne Hersey, Andrew Leach
2017 Expert Opinion on Drug Discovery  
Expert opinion: The advent of web technologies, cloud computing and micro services oriented architectures have made REST APIs an essential ingredient of modern software development models.  ...  Another emerging methodology is avoiding code duplication by composing using interface from a set of reusable components.  ...  The resulting workflow can be used for data retrieval, modeling, analysis and visualization. KNIME provides a well-defined node API for creating custom components.  ... 
doi:10.1080/17460441.2017.1339032 pmid:28602100 pmcid:PMC6321761 fatcat:j72ha7suqrarbmx2q5rj3s3jve

Dyn Tail - Dynamically Tailored Deployment Engines for Cloud Applications

Johannes Wettinger, Uwe Breitenbucher, Frank Leymann
2015 2015 IEEE 8th International Conference on Cloud Computing  
Other options include Flexiant's Bento Boxes 12 and GENTL [20] .  ...  After modeling a topology, deployment executables are required to deploy all individual infrastructure, middleware, and application components that are involved.  ... 
doi:10.1109/cloud.2015.63 dblp:conf/IEEEcloud/WettingerBL15 fatcat:km4uhkv7cvdg7fkc4anfbqt57u

The health care and life sciences community profile for dataset descriptions

Michel Dumontier, Alasdair J.G. Gray, M. Scott Marshall, Vladimir Alexiev, Peter Ansell, Gary Bader, Joachim Baran, Jerven T. Bolleman, Alison Callahan, José Cruz-Toledo, Pascale Gaudet, Erich A. Gombocz (+18 others)
2016 PeerJ  
The resulting metadata profile is generic and could be used by other domains with an interest in providing machine readable descriptions of versioned datasets.  ...  The community profile extends the DCAT model (Maali & Erickson, 2014) with versioning through a three component model (Fig. 1) , and detailed summary statistics.  ...  The three components of the dataset description model are: Summary Level Description: provides a description of the dataset that is independent of file formats or versions of the dataset.  ... 
doi:10.7717/peerj.2331 pmid:27602295 pmcid:PMC4991880 fatcat:gzzbdencszgaxc4j3yk527ikba

Bentonite blended with bagasse ash as an adsorbent for reactive red 198 dyes

Teshale Adane, Amare Tiruneh Adugna, Esayas Alemayehu
2021 Water practice and technology  
Desorption and reusability experiments in batch study confirmed that BC blended with SCBA can be used multiple times for dye removal from wastewater.  ...  The sorption isotherms and kinetics were evaluated using various existing models.  ...  Desorption and reusability studies were carried out in batch mode and confirmed that bento- nite blended with SCBA can be used multiple times for dye removal from aqueous solution  ... 
doi:10.2166/wpt.2021.129 fatcat:c7nhvci6hzecrbj37qbpezjdde

Learning design patterns with bayesian grammar induction

Jerry Talton, Lingfeng Yang, Ranjitha Kumar, Maxine Lim, Noah Goodman, Radomír Měch
2012 Proceedings of the 25th annual ACM symposium on User interface software and technology - UIST '12  
Design patterns have proven useful in many creative fields, providing content creators with archetypal, reusable guidelines to leverage in projects.  ...  We demonstrate the method on geometric models and Web pages, and discuss how the learned patterns can drive new interaction mechanisms for content creators.  ...  Maya support; Haden Lee for his work on the Web examples; and Scott Klemmer-along with several members of the Stanford Graphics Laboratory-for providing valuable feedback on this research.  ... 
doi:10.1145/2380116.2380127 dblp:conf/uist/TaltonYKLGM12 fatcat:o4monialdrhmjd4lobaxjov6ca

Book Reviews-Monographic Musings

Regina Gong
2019 Against the Grain  
This refreshing volume cuts through much of the hype about linked data with clear-eyed discussions of the components that make up the semantic web, and delves into several current ongoing projects and  ...  The third part of the volume, "Interfaces," starts with an explanation by librarians from the University of North Texas regarding the utility of the "bento box" approach to displaying search results in  ... 
doi:10.7771/2380-176x.7884 fatcat:5m4xoy4t6vdkphgd7zgbb7p7ma

A cyber-enabled spatial decision support system to inventory Mangroves in Mozambique: coupling scientific workflows and cloud computing

Wenwu Tang, Wenpeng Feng, Meijuan Jia, Jiyang Shi, Huifang Zuo, Christina E. Stringer, Carl C. Trettin
2016 International Journal of Geographical Information Science  
Cyber-enabled capabilities, including scientific workflows and cloud computing, are integrated with the SDSS. Scientific workflows enable the automation of data and modeling tasks in the SDSS.  ...  Mangroves are an important terrestrial carbon reservoir with numerous ecosystem services. Yet, it is difficult to inventory mangroves because of their low accessibility.  ...  This work was supported with funding from USAID -Mozambique through the US Forest Service International Programs Office. Special thanks is given to Dr.  ... 
doi:10.1080/13658816.2016.1245419 fatcat:qcmo7r43zvc7biuskukvigkkay
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