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Reproducible Research for Computing in Science & Engineering
2017
Computing in science & engineering (Print)
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in their pursuit of reproducible research. ...
Open Questions We're determined to make the CiSE RR track serve as a prototype for new norms in scholarly publishing of computational research. ...
doi:10.1109/mcse.2017.3971172
fatcat:atnx3azmcnafjbl4qtxsuk7nxe
Reproducible Research: Tools and Strategies for Scientific Computing
2012
Computing in science & engineering (Print)
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Bill Howe addresses the role of cloud computing in enabling reproducibility in computational research. ...
for reproducible computational science and includes seven articles, each describing software development efforts. ...
doi:10.1109/mcse.2012.82
fatcat:s2msk3z4u5djtgu7yrxkw65qpa
Automated Capture of Experiment Context for Easier Reproducibility in Computational Research
2012
Computing in science & engineering (Print)
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In this article, I examine the reasons why reproducibility is difficult to achieve, argue that for computational research to become consistently and reliably reproducible requires that reproducibility ...
In computational science, reproducibility has practical benefits in allowing code reuse and hence enabling more rapid progress and the ability to develop more complex models and analysis methods. ...
The value of reproducibility The term "reproducible research" in computational science covers a spectrum of activities [3] , distinguished by who is doing the reproducing, and to what degree they have ...
doi:10.1109/mcse.2012.41
fatcat:yrdefhn5o5bqno5ymlhpsbpzqi
Python Tools for Reproducible Research on Hyperbolic Problems
2009
Computing in science & engineering (Print)
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Reproducible research in computational science is only possible if the computer codes used to generate published results are distributed and/or archived in a form that can later be used to regenerate the ...
A set of Python tools for facilitating reproducible research on finite volume methods for hyperbolic conservation laws using the Clawpack software are briefly surveyed and illustrated on a sample application ...
Thanks are due also to Kyle Mandli for assistance in developing the Python and web portal tools being used with Clawpack. This work was supported in part by NSF grant DMS-0609661. ...
doi:10.1109/mcse.2009.13
fatcat:an6d2drak5aoxnbiyytxiuvijq
The Legal Framework for Reproducible Scientific Research: Licensing and Copyright
2009
Computing in science & engineering (Print)
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Options for Researchers Computational research is becoming more pervasive across a growing number of fields-for example, in the June 1996 issue of The Journal of the American Statistical Association, nine ...
Licensing and Copyright Victoria Stodden As computational researchers increasingly make their results available in a reproducible way, questions naturally arise regarding copyright, subsequent use and ...
The RRS is, in part, a tool to explain the meaning of reproducible research in the computational sciences and, as a result, help communicate scientific standards for acceptable practice. ...
doi:10.1109/mcse.2009.19
fatcat:vhnv6vqolrfmdpsvxrwcdcb36e
Reproducible research for scientific computing: Tools and strategies for changing the culture
2012
Computing in science & engineering (Print)
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To choose just a few examples, the annual Society for Industrial and Applied Mathematics (SIAM) Computational Science and Engineering conference featured a multispeaker session on reproducible research ...
Consequently, researchers from fields as diverse as geoscience, neuroscience, bioinformatics, applied mathematics, psychology, and computer science are calling for data and code to be made available in ...
In short, reproducible computational science must be recognized as standard practice. ...
doi:10.1109/mcse.2012.38
fatcat:3n7pkgb6uvhc5lwujzay2l6ioi
Reproducibility, correctness, and buildability: The three principles for ethical public dissemination of computer science and engineering research
2014
2014 IEEE International Symposium on Ethics in Science, Technology and Engineering
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We introduce standards for the evaluation of reproducibility, correctness, and buildability in relation to the varied elements of computer science research and discuss how they apply to proposals, workshops ...
We argue that these three principles are not being sufficiently met by current publications and proposals in computer science and engineering, and represent a goal for which publishing should continue ...
ACKNOWLEDGMENT The authors would like to thank our proofreaders, Dorilyn Martz Ames, Linda Davis, Shravan Gaonkar, Tony Kaap, Moshe Vardi, and Saman Zonouz, for their input. ...
doi:10.1109/ethics.2014.6893384
fatcat:rxdlne4o7zcv3dnixpmvfpdv4e
Reproducible research in computational sciences: A use case for uncertainty quantification using Jupyter Notebooks
2021
KU Leuven Open Science Day
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KU Leuven Open Science DayReproducible research in computational sciences: A use case for uncertainty quanti cation using Jupyter Notebooks 2 Abstract Reproducible research is gaining attention as a crucial ...
aspect of open science in recent years, emphasizing the core idea that the results of research should be reproducible and replicable by everyone given the original dataset, code, and software. ...
This becomes even more important in computational sciences, where researchers can claim a wide range of different output without providing enough details for reproducibility. ...
doi:10.21428/1192f2f8.7b6d2ad0
fatcat:rr6wmq7tpzabbjzxfzk62gwehm
Improving CSE software through reproducibility requirements
2011
Proceeding of the 4th international workshop on Software engineering for computational science and engineering - SECSE '11
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It is often observed that software engineering (SE) processes and practices for computational science and engineering (CSE) lag behind other SE areas [7] . ...
Computational science should have the same regard for independent verification but it does not. ...
In principle, computational science should have the same regard for independent confirmation, but a study of the literature shows that in many cases there is very little hope of reproducing published results ...
doi:10.1145/1985782.1985787
fatcat:wn2ybxiigndvtm3k6bqcazt37a
From FAIR research data toward FAIR and open research software
2020
it - Information Technology
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As compared to research data, research software should be both archived for reproducibility and actively maintained for reusability. ...
We review and analyze the current state in this area in order to give recommendations for making research software FAIR and open. ...
Computer science, in particular software engineering, may help with reproducibility and reuse to advance computational science. ...
doi:10.1515/itit-2019-0040
fatcat:pbzb2xiy2vh7hmpk33wdquvqbe
Comment on "Most computational hydrology is not reproducible, so is it really science?" by Christopher Hutton et al.: Let hydrologists learn the latest computer science by working with Research Software Engineers (RSEs) and not reinvent the waterwheel our
2017
Water Resources Research
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This work is in part funded by the research programme of the Netherlands Organisation for Scientific Research (NWO) under project number MP-272-13. ...
This work is in part funded by the Netherlands eScience Center (http:// www.nlesc.nl).
Water Resources Research 10.1002/2017WR020665 ...
.: Let
hydrologists learn the latest computer
science by working with Research
Software Engineers (RSEs) and not
reinvent the waterwheel ourselves,
Water Resour. ...
doi:10.1002/2017wr020665
fatcat:gqbiroidknaudlvgwlzq5ouium
Open Source Research Software
2020
Computer
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It should be both archived for reproducibility and actively maintained for reusability. science. 3 Computer science-in particular, software engineering-may help with reproducibility and reuse to advance ...
However, research in software engineering and computer science itself will also benefit when programs are reused. ...
doi:10.1109/mc.2020.2998235
fatcat:53xndepwxvghjfa2rdgkpi3cx4
Beyond the Badge: Reproducibility Engineering as a Lifetime Skill
[article]
2022
arXiv
pre-print
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They serve a dual purpose: Apart from acquiring the coveted badges assigned to reproducible research, reproducibility engineering is a lifetime skill for a professional industrial career in computer science ...
Knowledge and capabilities in setting up engineering environments that allow for reproducing artefacts and results over decades (a standard requirement in many traditional engineering disciplines), writing ...
., is a computer science researcher at University of Passau, and has tutored the joint RepEng course. ...
arXiv:2203.05283v1
fatcat:xnt65cfsqnglvjxcpv5h3dfjc4
FAIR and Open Computer Science Research Software
[article]
2019
arXiv
pre-print
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In computational science and in computer science, research software is a central asset for research. ...
However, research in software engineering and computer science itself will also benefit from reuse when research software is involved. ...
Proper research software engineering enables reproducibility and reusability of research software in computational science. ...
arXiv:1908.05986v1
fatcat:zjnwi5godrd4tdquzijcu2ty6a
Search for Computational Workflow Synergies in Reproducible Research Data Analyses in Particle Physics and Life Sciences
2018
2018 IEEE 14th International Conference on e-Science (e-Science)
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ACKNOWLEDGMENT The CWL integration with the REANA platform was partially supported by the United States' National Science Foundation grant PHY-1247316 "Data and Software Preservation for Open Science" ...
The present work paves the way towards reproducible science synergies in particle physics and life sciences. ...
Index Terms-reproducible science, data preservation, data analysis, computational workflows I. ...
doi:10.1109/escience.2018.00123
dblp:conf/eScience/SimkoCCHKKR18
fatcat:5lwbmlcm75dbdfysth4b6kxh4e
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