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Managing Replicated Remote Procedure Call Transactions

W. Zhou
1999 Computer journal  
This paper addresses the problem of building reliable computing programs over remote procedure call (RPC) systems by using replication and transaction techniques.  ...  Remote procedure call (RPC) is perhaps the most popular model used in today's distributed software development and has become a de facto standard for distributed computing.  ...  By c(p, d) = OK, where p ∈ P is a remote procedure and d ∈ O is the data object processed by the call, we mean that the RPC call was successful (i.e. the remote procedure performed the job).  ... 
doi:10.1093/comjnl/42.7.592 fatcat:hwz5oshehna6jc6nlv3ykglqle

Replicated distributed programs

Eric C. Cooper
1985 ACM SIGOPS Operating Systems Review  
Implementing Replicated Procedure Calls Replicated procedure calls are made between troupes, which are sets of modules.  ...  Replicated Procedure Calls A thread in a replicated distributed program transfers control from one troupe to another by means of replicated procedure calls.  ... 
doi:10.1145/323627.323635 fatcat:2bwjewrlpvelpaiehog6tuqf6e

Replicated distributed programs

Eric C. Cooper
1985 Proceedings of the tenth ACM symposium on Operating systems principles - SOSP '85  
Implementing Replicated Procedure Calls Replicated procedure calls are made between troupes, which are sets of modules.  ...  Replicated Procedure Calls A thread in a replicated distributed program transfers control from one troupe to another by means of replicated procedure calls.  ... 
doi:10.1145/323647.323635 dblp:conf/sosp/Cooper85 fatcat:cgtdxuj4n5dkxm2mbcqnyd4zie

Tools for T-RFLP data analysis using Excel

Nils Johan Fredriksson, Malte Hermansson, Britt-Marie Wilén
2014 BMC Bioinformatics  
normalization and alignment of replicate profiles, generation of consensus profiles, normalization and alignment of consensus profiles and final analysis of the samples including calculation of association  ...  The procedures are designed so that in all analysis steps, from the initial preparation of the data to the final comparison of the samples, there are various different options available.  ...  The new size, height and area data is the average value of all replicates. The procedure uses the data in "InData" and creates a new sheet called "RepConsensus".  ... 
doi:10.1186/s12859-014-0361-7 pmid:25388093 pmcid:PMC4228162 fatcat:i56k4cz6sfe7dpefgpp4cappuu

Detection of differentially methylated regions from whole-genome bisulfite sequencing data without replicates

Hao Wu, Tianlei Xu, Hao Feng, Li Chen, Ben Li, Bing Yao, Zhaohui Qin, Peng Jin, Karen N. Conneely
2015 Nucleic Acids Research  
We demonstrate that using information from neighboring CG sites, biological variation can be estimated accurately even without replicates. DMR detection is then carried out via a Wald test procedure.  ...  We develop a statistical method, DSS-single, for detecting DMRs from WGBS data without replicates.  ...  We further evaluate the single-replicate DMR calling results by comparing them to the DMRs called using two replicates, since there are two biological replicates for both H1 and IMR90.  ... 
doi:10.1093/nar/gkv715 pmid:26184873 pmcid:PMC4666378 fatcat:avrc5azuarhirbjf5chsknon3i

User profile replication with caching for distributed location management in mobile communication networks

Hoang Nguyen Minh, Harmen R. van As
2001 Proceedings of the 2001 ACM symposium on Applied computing - SAC '01  
A new location strategy called user profile replication with caching (UPRC) is proposed.  ...  In UPRC, user profiles based on user mobility patterns are replicated and combined with caching of the called user profile.  ...  In both cases, the MFLA of the called MT is found and the called MT can be paged by a paging procedure. Paging Paging is a procedure that allows calls to be delivered to MTs.  ... 
doi:10.1145/372202.372377 dblp:conf/sac/MinhA01 fatcat:jy3zovhtt5cnvl4j7fnnav6cxy

Quality assessment of buccal versus blood genomic DNA using the Affymetrix 500 K GeneChip

Jessica G Woo, Guangyun Sun, Mary Haverbusch, Subbarao Indugula, Lisa J Martin, Joseph P Broderick, Ranjan Deka, Daniel Woo
2007 BMC Genetics  
Using the BRLMM algorithm, genotyping call rates for blood samples averaged 98.4%, and for buccal samples averaged 97.8%.  ...  Conclusions Buccal cytobrushes stored long-term result in sufficient dsDNA concentrations to achieve high genotyping call rates and concordance with stored blood samples in the context of Affymetrix 500K  ...  After this procedure, two buccal brushes (both from individual C) still had dsDNA concentrations <50 ng/µl (replicate 1: 40.4 ng/µl, replicate 2: 30.8 ng/µl).  ... 
doi:10.1186/1471-2156-8-79 pmid:17996058 pmcid:PMC2174507 fatcat:6r7egnzdrzebnd7t2ij7azlywm

A Comparative Study on Distributed Location Management Strategies in Wireless Networks [chapter]

Hoang Nguyen-Minh, Harmen R. As
2000 Personal Wireless Communications  
Results show that the combination of replication with caching scheme (VLD-CLD) performs better than the replication scheme (HLD-VLD) for a very wide range of call-to-mobility ratio (CMR). 1.  ...  The location update procedure and call delivery procedure are given in Figures 2a and 2b , respectively. HLD-VLD In this section, we introduce a simple replication (SR) scheme called HLD-VLD.  ...  VLD-CLD In this section, we introduce a simple replication with caching (SRC) scheme called VLD-CLD.  ... 
doi:10.1007/978-0-387-35526-9_10 fatcat:yvttefpdzfehdj25si7pfw4l7y

The Enterprise model for developing distributed applications

J. Schaeffer, D. Szafron, G. Lobe, I. Parsons
1993 IEEE Parallel & Distributed Technology Systems & Applications  
Instead, they write their programs in C, augmented by new semantics that allow procedure calls to be executed in parallel.  ...  Because the (sequential) code that calls the parallel procedures is independent of these procedures, programmers can adapt applications to varying numbers and types of processors without rewriting their  ...  procedure calls.  ... 
doi:10.1109/88.242459 fatcat:rukmws4lmvasbjuixvgww2v2qy

Exploiting domain-specific properties: compiling parallel dynamic neural network algorithms into efficient code

L. Prechelt
1999 IEEE Transactions on Parallel and Distributed Systems  
Two other optimizations, connection allocation and selecting the numberof replicates, speed programs up by about 50 or 100, respectively.  ...  Note that calls to node procedures and connection procedures imply parallelism group calls".  ...  With network replication, calls to network procedures imply parallelism, too line 63. Network replication essentially implies parallelism on the level of training examples in a neural algorithm.  ... 
doi:10.1109/71.809571 fatcat:76q7ifz2nradjeotpcqt6b2qme


Luís Miguel Pinho, Francisco Vasques
1998 ACM SIGAda Ada Letters  
Several issues regarding fault tolerance are presented and mechanisms to achieve fault tolerance by software active replication in Ada 95 are discussed.  ...  Several issues regarding fault tolerance are presented and mechanisms to achieve fault tolerance by software active replication in Ada 95 are discussed.  ...  The protected object Buffer procedures Write and Read can be called from different tasks. As already stated, system replication can induce non-deterministic access to objects.  ... 
doi:10.1145/301687.289532 fatcat:ncqjlsm3mnaqpekk3itzdqtk4q

Featherweight threads and ANDF compilation of concurrency [chapter]

Ben Sloman, Tom Lake
1995 Lecture Notes in Computer Science  
Communication between address spaces is supported by remote service request mechanisms based upon asynchronous activation of remote threads and synchronous remote procedure calls.  ...  We present an intermediate representation called ThreadTDF, a component of the Parallel TDF system for compiling distributed concurrent programs to shared and distributed memory multiprocessors.  ...  global yield concurrent call Duration (~s) 0.25 0.18 0.44 0.50-1.90 0.18 0.2~ 14.0 16.0 empty sequential call no replicated variables statically replicated variables dynamically replicated  ... 
doi:10.1007/bfb0020485 fatcat:gakdnwxwojerje24bldsdnmbv4

Early-replicating heterochromatin

S.-M. Kim
2003 Genes & Development  
We found that heterochromatic centromeres and silent matingtype cassettes replicate in early S phase. Only heterochromatic telomeres replicate in late S phase.  ...  Heterochromatin, which is more condensed and rarely transcribed, usually replicates in late S phase.  ...  not called into question the paradigm of late heterochromatin replication.  ... 
doi:10.1101/gad.1046203 pmid:12569122 pmcid:PMC195982 fatcat:4tgqsnxfjfbkjcnc5t37br2vbu

Replicability analysis in genome-wide association studies via Cartesian hidden Markov models

Pengfei Wang, Wensheng Zhu
2019 BMC Bioinformatics  
In this paper, we propose a novel multiple testing procedure based on the Cartesian hidden Markov model (CHMM), called repLIS procedure, for replicability analysis across two studies, which can characterize  ...  We carry out simulation studies to compare our repLIS procedure with the existing methods, including the Benjamini-Hochberg (BH) procedure and the empirical Bayes approach, called repfdr.  ...  The implementations of repLIS procedure are available on GitHub ( large-scale-multiple-testing-via-CHMM). The authors declare that they have no competing interests.  ... 
doi:10.1186/s12859-019-2707-7 pmid:30885122 pmcid:PMC6423849 fatcat:xtafy7s53zcmrpt4nimt6tlwma

Compile time instruction cache optimizations [chapter]

Abraham Mendlson, Shlomit S. Pinter, Ruth Shtokhamer
1994 Lecture Notes in Computer Science  
The technique is based on replication of code together with algorithms for code placement. We introduce the notion of abstract caches and present simulation results of the new technique.  ...  Since the cache was large enough, our replication and relocation technique managed to place the called procedures of each phase in a conflict free manner.  ...  Each phase is typically composed of nested loops with procedure calls.  ... 
doi:10.1007/3-540-57877-3_27 fatcat:liwcwwhzd5a6vnrm7ey4t2icje
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