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ROHub — A Digital Library of Research Objects Supporting Scientists Towards Reproducible Science [chapter]

Raúl Palma, Piotr Hołubowicz, Oscar Corcho, José Manuel Gómez-Pérez, Cezary Mazurek
2014 Communications in Computer and Information Science  
ROHub is a digital library system for ROs that supports their storage, lifecycle management and preservation. It provides a Web interface and a set of RESTful APIs.  ...  Research Objects (ROs) are semantic aggregations of related scientific resources, their annotations and research context.  ...  Acknowledgements This work was supported by Wf4Ever EU project (http://www.wf4ever-project.org, FP7-270129).  ... 
doi:10.1007/978-3-319-12024-9_9 fatcat:leaf2plifrhvtbuy4wumanervy

D5.2 Design, implementation and deployment of research object services – phase I

Raul Palma, Soumya Brahma, Malgorzata Wolniewicz
2022 Zenodo  
A key characteristic of the proposed RO specification is that it is data-cube centric, as a fundamental differentiating principle of the Earth Science communities that are supported by RELIANCE.  ...  In particular, such tools and services include the services for FAIR self-assessment and quality assessment of research objects, the adaptations of research objects evolution to EOSC scenarios, the initial  ...  In the context of Earth Science, there is initiative of the project ROHub to assess the FAIRNESS of a research object [1] .  ... 
doi:10.5281/zenodo.6260936 fatcat:w6s5s2tm4ngdhbexdjnbqiah6m

D6.1 EOSC Integration Plan

Raul Palma, Soumya Brahma, Jose Manuel Gomez-Perez, Andres Garcia, Simone Mantovani, Pedro Gonçalves
2021 Zenodo  
The plan is based on the existing guidelines and the current EOSC landscape which is a continuously evolving environment.  ...  the recently started projects funded along with RELIANCE as part of the INFRAEOSC-07 programme.  ...  Some of the latest advances in this journey, which are available via ROHub, include: a new module extending the research object model to support the needs of scientists in Earth Science (e.g., geospatial  ... 
doi:10.5281/zenodo.4913280 fatcat:og5xxzhkcrgndfjil7nlwrtgny

EVER-EST: The Platform Allowing Scientists to Cross-Fertilize and Cross-Validate Data

Mirko Albani, Rosemarie Leone, Federica Foglini, Francesco De Leo, Fulvio Marelli, Iolanda Maggio
2020 Data Science Journal  
a range of both generic and domain specific data analysis and management services to support a dynamic approach to collaborative research.  ...  Central to this work is the use of Research Objects (ROs) as semantically rich aggregations of data, methods and people in scientific investigations supporting the implementation of FAIR guiding principles  ...  extended research object model adapted to the needs of earth scientists; • The provisioning of digital object identifiers (DOI) to enable persistent identification and to give due credit to authors; •  ... 
doi:10.5334/dsj-2020-021 fatcat:knmyphsh2zgu7kdkcfswme6bqa

Reproducibility of Data-Oriented Experiments in e-Science (Dagstuhl Seminar 16041)

Juliana Freire, Norbert Fuhr, Andreas Rauber, Marc Herbstritt
2016 Dagstuhl Reports  
This seminar brought together experts from various sub-fields of computer science to create a joint understanding of the problems of reproducibility of experiments, discussing existing solutions and impediments  ...  This report documents the program and the outcomes of Dagstuhl Seminar 16041 "Reproducibility of Data-Oriented Experiments in e-Science".  ...  We give an account of our own failed attempt at reproducing the results in a published research paper, a description of an empirical study into the reproducibility of the research published in 601 papers  ... 
doi:10.4230/dagrep.6.1.108 dblp:journals/dagstuhl-reports/FreireFR16 fatcat:tjrh57ezlngyfhtr35dwenzhyu

Packaging research artefacts with RO-Crate

Stian Soiland-Reyes, Peter Sefton, Mercè Crosas, Leyla Jael Castro, Frederik Coppens, José M. Fernández, Daniel Garijo, Björn Grüning, Marco La Rosa, Simone Leo, Eoghan Ó Carragáin, Marc Portier (+4 others)
2021 Zenodo  
An increasing number of researchers support reproducibility by including pointers to and descriptions of datasets, software and methods in their publications.  ...  As a general purpose packaging approach for data and their metadata, RO-Crate is used across multiple areas, including bioinformatics, digital humanities and regulatory sciences.  ...  Harvard Data Commons is supported by an award from Harvard University Information Technology (HUIT). Contributions  ... 
doi:10.5281/zenodo.5730982 fatcat:pqxg7s4evbhjhjbnds5gqj2x6e

Packaging research artefacts with RO-Crate

Stian Soiland-Reyes, Peter Sefton, Mercè Crosas, Leyla Jael Castro, Frederik Coppens, José M. Fernández, Daniel Garijo, Björn Grüning, Marco La Rosa, Simone Leo, Eoghan Ó Carragáin, Marc Portier (+4 others)
2021 Zenodo  
An increasing number of researchers support reproducibility by including pointers to and descriptions of datasets, software and methods in their publications.  ...  As a general purpose packaging approach for data and their metadata, RO-Crate is used across multiple areas, including bioinformatics, digital humanities and regulatory sciences.  ...  Acknowledgements This work has received funding from the European Commission's Horizon 2020 research and innovation programme for projects BioExcel-2 (H2020- Marco La Rosa https://orcid.org/0000-0001-5383  ... 
doi:10.5281/zenodo.5146228 fatcat:x7hmkkopbregzeu3jlc4o5yqwm

Packaging research artefacts with RO-Crate

Stian Soiland-Reyes, Peter Sefton, Mercè Crosas, Leyla Jael Castro, Frederik Coppens, José M. Fernández, Daniel Garijo, Björn Grüning, Marco La Rosa, Simone Leo, Eoghan Ó Carragáin, Marc Portier (+4 others)
2022 Zenodo  
An increasing number of researchers support reproducibility by including pointers to and descriptions of datasets, software and methods in their publications.  ...  As a general purpose packaging approach for data and their metadata, RO-Crate is used across multiple areas, including bioinformatics, digital humanities and regulatory sciences.  ...  Sloan Foundation (grant number P-2020-13988). 106 Harvard Data Commons is supported by an award from Harvard University Information Technology (HUIT).  ... 
doi:10.5281/zenodo.5833456 fatcat:y4ich2ds5ndfbkg4cdpmei2cey

Packaging research artefacts with RO-Crate

Stian Soiland-Reyes, Peter Sefton, Mercè Crosas, Leyla Jael Castro, Frederik Coppens, José M. Fernández, Daniel Garijo, Björn Grüning, Marco La Rosa, Simone Leo, Eoghan Ó Carragáin, Marc Portier (+5 others)
2022 Data Science  
An increasing number of researchers support reproducibility by including pointers to and descriptions of datasets, software and methods in their publications.  ...  As a general purpose packaging approach for data and their metadata, RO-Crate is used across multiple areas, including bioinformatics, digital humanities and regulatory sciences.  ...  Sloan Foundation (grant number P-2020-13988). 106 Harvard Data Commons is supported by an award from Harvard University Information Technology (HUIT).  ... 
doi:10.3233/ds-210053 fatcat:5mm47i2mnbcmbhhyqpj22sti2q

D5.4: Integrated Data Management Workflows

Ari Lukkarinen, Anne Fouilloux, Hamish Struthers, Tommi Bergmann, Risto Makkonen, Jean Iaquinta, Helmut Neukirchen, Ernir Erlingsson, Adil Hasan
2021 Zenodo  
This deliverable aims to investigate relevant EOSC and national services that can be leveraged to support cross-border data management, data-driven distributed computing and research workflows for two  ...  Emphasis is placed on data aggregation and interlinking of sharing and active data storage.  ...  In this context supporting these researchers and realizing the benefits of Open Science should be a priority for EOSC.  ... 
doi:10.5281/zenodo.5713744 fatcat:z6w6fnyya5hrpljcxcz5f4mo6e

Participatory Science Toolkit Against Pollution [article]

Gefion Thuermer, Neal Reeves, Ilaria Baroni, Damiano Scandolari, Mario Scrocca, Roy van Grunsven, Eddy Maddalena, Elena Simperl, Kat Austen, Franz Hoelker, Sybille Schroer, Sonja Grossberndt (+6 others)
2022 Zenodo  
ACTION team, to ensure it suits the requirements of citizen science projects, addressing the practical problems that they face throughout the different stages of each project.  ...  The toolkit draws on expertise in citizen science, participatory design, social innovation, socio-economic studies, pollution, open science, social computing, open data and software development in the  ...  Research objects generated with this tool may be published on other platforms like RoHub or visualised in our future Knowledge Portal (an evolution of our Open Data Portal).  ... 
doi:10.5281/zenodo.6491234 fatcat:nqicjytqrfdsnjyfz5jeeobqwu

Dagstuhl Reports, Volume 6, Issue 1, January 2016, Complete Issue [article]

2016
This work was funded by Flamingo, a Network of Excellence project (ICT-318488) supported by the European Commission under its Seventh Framework Programme.  ...  popularization of research results for a general audience.  ...  Mazurek, "ROHub -A Digital Library of Research Objects Supporting Scientists Towards Reproducible Science", in Semantic Web Evaluation Challenge at ESWC'14, Communications in Computer and Information Science  ... 
doi:10.4230/dagrep.6.1 fatcat:vq74ezrwifbkhex6twvtdzbpaa