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Relative Lempel-Ziv (RLZ) is a popular algorithm for compressing databases of genomes from individuals of the same species when fast random access is desired. With Kuruppu et al.' ... (SPIRE 2014) then pointed out that also using relative pointers and run-length compressing them usually gives even better compression. In this paper we generalize Ferrada et al.' ... We then compressed the target against the reference with Ferrada et al.'s optimization of RLZ -which reflects the current state of the art, as explained in Section 1 -and with RLZAP. ...arXiv:1605.04421v1 fatcat:jrbk7vqejrhh3hd7jwqyukssua
With this, it is possible to create a relative representation of positions. ... PPMD  , which is a variant of Prediction by partial matching (PPM)  , Range coding  , GZIP  , Log-skewed  , Compressed Integer Set  , Compressed bit vectors  , Lempel-Ziv-Markov ...doi:10.1371/journal.pone.0232942 pmid:32453750 fatcat:mq6d6uneendw3pjdeyrplacmam