A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2020; you can also visit the original URL.
The file type is application/pdf.
Filters
Quasi-cellular systems: stochastic simulation analysis at nanoscale range
2013
BMC Bioinformatics
Preserved Fulltext
Stochastic simulation is a valuable tool in the study of biochemical reaction at nanoscale range. ...
Quasi-cellular systems able to produce proteins directly from DNA can be obtained by encapsulating the cell-free transcription/translation system PURESYSTEM(PS) in liposomes. ...
Acknowledgements The Authors thank Claudio Felicioli for his valuable collaboration in managing the code of the Stochastic Simulator QDC. ...
doi:10.1186/1471-2105-14-s7-s7
pmid:23815522
pmcid:PMC3633058
fatcat:xosocvmisrcqrjjt57gqpryoc4
Quasi-cellular systems: stochastic simulation analysis at nanoscale range
2012
EMBnet journal
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2019; you can also visit the original URL.
The file type is application/pdf.
Stochastic simulation is a valuable tool in the study of biochemical reaction at nanoscale range. ...
Quasi-cellular systems able to produce proteins directly from DNA can be obtained by encapsulating the cell-free transcription/translation system PURESYSTEM™(PS) in liposomes. ...
Acknowledgements The Authors thank Claudio Felicioli for his valuable collaboration in managing the code of the Stochastic Simulator QDC. ...
doi:10.14806/ej.18.a.399
fatcat:4jarqh24indgxf47bvlctwvfgu
Self-Organizing Systems
[chapter]
2003
Encyclopedia of Physical Science and Technology
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2017; you can also visit the original URL.
The file type is application/pdf.
The notion of a graph is, however, more general, and allows other agent-based systems to be simulated. ...
Explicit simulations of such systems have been considered in the context of "Artificial Chemistries" [46] . ...
See also -Open Systems -System Modelling -Non-equilibrium systems -Entropy -Cellular Automata -Swarm Intelligence -Biological Development and Evolution -Social Systems -Information Systems -Communication ...
doi:10.1016/b0-12-227410-5/00681-5
fatcat:c4cdgyk6wjbizbc7ivbqah75am
Numerical simulation methods in tribology
2007
Tribology International
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2017; you can also visit the original URL.
The file type is application/pdf.
and their reintegration into the surfaces at the nanoscale. ...
The processes on the nanoscale are simulated with the method of Movable Cellular Automata. r ARTICLE IN PRESS www.elsevier.com/locate/triboint 0301-679X/$ -see front matter r ...
and their reintegration into the surfaces at the nanoscale. ...
doi:10.1016/j.triboint.2006.02.020
fatcat:jkpqn4i7orbufpny3zcxjtjpde
Terahertz Band: The Last Piece of RF Spectrum Puzzle for Communication Systems
2019
IEEE Open Journal of the Communications Society
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2020; you can also visit the original URL.
The file type is application/pdf.
Moreover, the recently proposed channel models available for propagation at THz band frequencies are introduced. ...
As such, in this work, we present an up-to-date review paper to analyze key concepts associated with the THz system architecture. ...
These involve geometry based stochastic channel models (GSCM) as well as quasi-deterministic models. ...
doi:10.1109/ojcoms.2019.2953633
fatcat:sabw2nhimzcixduohzgn4e7nxa
Strategies and Tactics in Multiscale Modeling of Cell-to-Organ Systems
2006
Proceedings of the IEEE
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2020; you can also visit the original URL.
The file type is application/pdf.
This is normally accomplished at the risk of limiting the range of adaptability of the model. ...
Each simplification of lower level complicated function reduces the range of accurate operability at the higher level model, reducing robustness, the ability to respond correctly to dynamic changes in ...
The range of types of multiscale modeling applications is quite broad, ranging from ecological model aggregation [53] to representations of materials properties at the nanoscale. ...
doi:10.1109/jproc.2006.871775
pmid:20463841
pmcid:PMC2867355
fatcat:g5x23zq5qncbxmrotrqjbofuva
Computational modeling of single-cell mechanics and cytoskeletal mechanobiology
2017
Wiley Interdisciplinary Reviews: Systems Biology and Medicine
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2021; you can also visit the original URL.
The file type is application/pdf.
We discuss broad areas of advancement that could accelerate research and understanding of cellular mechanobiology. ...
Cellular cytoskeletal mechanics plays a major role in many aspects of human health from organ development to wound healing, tissue homeostasis and cancer metastasis. ...
The quasi-static approximation is routinely used to simulate deformations at iteratively increasing loads, thus removing the velocity and acceleration variables in the equations. ...
doi:10.1002/wsbm.1407
pmid:29195023
pmcid:PMC5836888
fatcat:dh5nfwrumrguvid7h2n6ngmzoy
Multiscale-failure criteria of carbon nanotube systems under biaxial tension–torsion
2007
Nanotechnology
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2017; you can also visit the original URL.
The file type is application/pdf.
Our simulations show that the strength of lattice trapping depends on the interaction range of the interatomic force fields. ...
Through a stability analysis of crack-tip bond separation, the athermal ͑nonthermally activated͒ loads of instantaneous fracture are determined, thereby yielding the estimated lattice trapping range. ...
ACKNOWLEDGMENT The authors acknowledge startup fund support from the College of Engineering and the Center for Computer-Aided Design ͑CCAD͒ at the University of Iowa. ...
doi:10.1088/0957-4484/18/48/485715
fatcat:leh6psovozdxjen2luaf6gzvda
Diffusion-Based Noise Analysis for Molecular Communication in Nanonetworks
2011
IEEE Transactions on Signal Processing
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2013; you can also visit the original URL.
The file type is application/pdf.
Molecular communication (MC) is a promising bioinspired paradigm, in which molecules are used to encode, transmit and receive information at the nanoscale. ...
The reference diffusion-based MC system for this analysis is the physical end-to-end model introduced in a previous work by the same authors. ...
However, the analysis of the system is limited to a numerical evaluation of the simulation results using communication engineering parameters [e.g., the signal-to-noise ratio (SNR)]. ...
doi:10.1109/tsp.2011.2114656
fatcat:yuxr7tkg4zh7rgoys3ll6izyna
Super-Resolution Microscopy Reveals Protein Spatial Reorganization in Early Innate Immune Responses
2011
Biophysical Journal
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2017; you can also visit the original URL.
The file type is application/pdf.
This enables us to accurately investigate the interplay of at least three differently labeled cellular components [1]. ...
In order to expand the regime of applications to high-resolution colocalization studies we designed a setup which allows for STED imaging of up to three different labels (quasi-)simultaneously. ...
Spectral CARS data sets were generated by imaging tissue sections at consecutive Raman shifts in the CH 2 stretching vibrational range. ...
doi:10.1016/j.bpj.2010.12.2135
fatcat:wj73plpscrecneuofishjsp334
Out-of-equilibrium dynamics of classical and quantum complex systems
2013
Comptes rendus. Physique
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2020; you can also visit the original URL.
The file type is application/pdf.
Note that this fulltext copy is not of the "primary" version of this work. The version it corresponds to is:
2013 pre-print arXiv:1305.7126v1 fatcat:qaze2w7nwfdbncgdjnadeebmyu
It is illusionary to attempt to give, at least at this stage, a complete description of all non-equilibrium situations. ...
Whenever the external or internal parameters of a physical system are varied its subsequent relaxation to equilibrium may be either impossible or take very long times. ...
Topological defects proliferate in the disordered phase and they bind in pairs in the one with quasi long-range order and correlation functions that decay algebraically. ...
doi:10.1016/j.crhy.2013.09.004
fatcat:ucckrnge35aebktsh35c4vmika
A Review of Statistical Methods for Quality Improvement and Control in Nanotechnology
2009
Journal of QualityTechnology
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2011; you can also visit the original URL.
The file type is application/pdf.
This paper reviews some instances where statistical methods have been used in nanoscale applications. ...
Because measurements with complicated data patterns are frequently seen in experiments in nanotechnology, the collection, analysis, and modeling Vol. 41, No. 2, April 2009 www.asq.org FIGURE 7. ...
At random times, the system switches from state on (or up) to state off (or down) and vice versa. ...
doi:10.1080/00224065.2009.11917770
fatcat:izaiqisx6nftpdmqvceghmjpgq
Shining New Light on the Structural Determinants of Cardiac Couplon Function: Insights From Ten Years of Nanoscale Microscopy
2018
Frontiers in Physiology
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2019; you can also visit the original URL.
The file type is application/pdf.
In particular, super-resolution and tomographic electron micrographs have revised and refined the classical views of the nanoscale geometries of couplons, t-tubules and the organisation of the principal ...
More recently, we characterised the morphological differences between the t-tubular systems in a range of mammalian species . ...
In addition to the above features, a handful of new observations of couplon and cellular remodelling now call for further investigation with the use of nanoscale imaging methods. ...
doi:10.3389/fphys.2018.01472
pmid:30405432
pmcid:PMC6204384
fatcat:6ieeujy7rfh4jbhnpexex3gvmu
Ultrastructural anatomy of nodes of Ranvier in the peripheral nervous system as revealed by STED microscopy
2016
Proceedings of the National Academy of Sciences of the United States of America
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2017; you can also visit the original URL.
The file type is application/pdf.
We used stimulated emission depletion (STED) superresolution microscopy to analyze the nanoscale organization of 12 glial and axonal proteins at the nodes of Ranvier of teased sciatic nerve fibers. ...
At paranodes, both axonal proteins (betaII spectrin, Caspr) and glial proteins (neurofascin-155, ankyrin B) form periodic quasi-one-dimensional arrangements, with a high degree of interdependence between ...
This work was supported through the Center for Nanoscale Microscopy and Molecular Physiology of the Brain (CNMPB) in Göttingen. ...
doi:10.1073/pnas.1619553114
pmid:28003466
pmcid:PMC5240729
fatcat:kgokag5i2bftlpnkj2cggvitce
Self-Assembly Kinetics of Microscale Components: A Parametric Evaluation
2015
Journal of microelectromechanical systems
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2016; you can also visit the original URL.
The file type is application/pdf.
the rate at which stochastic interactions occur. ...
At the microscale, stochastic interactions occur at a much slower rate. Generally, components need to travel longer distances, and do so at much slower speeds (Nathan B. ...
APPENDIX C:
MATLAB SCRIPTS
C.1 Matlab Script for Image Analysis and Part-Location Recognition %% Apply Scaling/Alignment to Pickup Locations npi=IAnalysis.number_parts_per_image; C=Pickup.raw(2:(npi ...
doi:10.1109/jmems.2014.2354137
fatcat:w2nffzdiorfxnpquwycc3yrzei
« Previous
Showing results 1 — 15 out of 592 results