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Prototyping a genetics deductive database
1994
Proceedings. International Conference on Intelligent Systems for Molecular Biology
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We are developing a laboratory notebook system known as the Genetics Deductive Database. ...
The Genetics Deductive Database is built using new database technology which provides an object-oriented conceptual model, a declarative rule language, and a procedural update language. ...
Acknowledgements This research was partly supported by the European Commission under ESPRIT Project 6333 IDEA (Intelligent Database Environments for Advanced Applications). ...
pmid:7584387
fatcat:zhlsegwikzcwhemdlse5zapwii
Using interval logic for order assembly
1994
Proceedings. International Conference on Intelligent Systems for Molecular Biology
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Then, we present and discuss a deductive and object-oriented data model based on this formalism for a genetic deductive database, and the inference rules required. ...
The formalism supports the maintenance of coarser knowledge of unordered, partially ordered and completely ordered genetic data in a relational hierarchy. ...
At the Imperial Cancer Research Fund, we are investigating how to build a genetics database in the context of deductive and object-oriented databases. ...
pmid:7584379
fatcat:arsaassavzfebcrhwopr6bowqa
Towards an information managemenet system for genomic objects and processes
1993
Genome Informatics Series
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The prototype system integrates public data of several major databases physically into a server readonly database. ...
Integration of data and knowledge -deductive interface to the IGD database to faciliate logic based analysis of the data, and the representation of biological knowledge, as well as of data integrity rules ...
doi:10.11234/gi1990.4.456
fatcat:gw2d3kwevng3pfe4xld435rvhm
Molecular Epidemiology of Coxsackievirus A16: Intratype and Prevalent Intertype Recombination Identified
2013
PLoS ONE
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, 593 complete CVA16 VP1 sequences from 1981 to 2011, and prototype strains of human enterovirus species A (EV-A). ...
To clarify the genetic characteristics and the epidemic patterns of CVA16 in mainland China, comprehensive bioinfomatics analyses were performed by using 35 CVA16 whole genome sequences from 1998 to 2011 ...
This deduction could also be supported by the nucleotide sequence identities with every prototype of EV-A. ...
doi:10.1371/journal.pone.0082861
pmid:24340064
pmcid:PMC3858299
fatcat:aca66jqlmne2vi2vaozvcpph4q
HYCONES: a hybrid connectionist expert system
1993
Proceedings. Symposium on Computer Applications in Medical Care
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The paper describes the architecture of the system, focusing on the hybrid aspects of the knowledge base and on its automatic knowledge acquisition technique from a case database. ...
This paper describes HYCONES, a tightly-coupled Hybrid Connectionist Expert System that integrates neural networks with a symbolic approach (frames). ...
Deductive learning is achieved through the use of a technique similar to the recombination operator of genetic algorithms. ...
pmid:8130516
pmcid:PMC2248551
fatcat:3nwshyh2cbey5lqlj2gdtckz6q
Molecular Epidemiology of Echovirus 18 Circulating in Mainland China from 2015 to 2016
2019
Virologica Sinica
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Combined with the sequences from the GenBank database, we performed an extensive genetic analysis. ...
Echovirus 18 (E18), a serotype of Enterovirus B (EV-B) species, is an important pathogen in aseptic meningitis. ...
Combined with the sequences from the GenBank database, we further performed an extensive genetic analysis to elucidate the molecular epidemiology and genetic characteristics of E18 in mainland China. ...
doi:10.1007/s12250-018-0080-8
pmid:30790201
pmcid:PMC6420525
fatcat:o5c3xzaguvhgvcveolnapuvxfi
GPR: A Data Mining Tool Using Genetic Programming
2001
Communications of the Association for Information Systems
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In Section III we discuss the application of genetic programming to data mining. Section IV provides a detailed description of GPR, our prototype data mining tool. ...
We present a step-by-step method to implement GPR, and introduce a prototype that generates production rules from real life data. ...
Deduction allows inference of specific knowledge about relationships between data elements in the database, much as a syllogism is constructed. ...
doi:10.17705/1cais.00506
fatcat:xbklzxyinjgtfj7ifchudm4j74
A semantic model for scholarly electronic publishing in Biomedical Sciences
2014
Semantic Web Journal
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The development and testing of a prototype of a Web submission interface to an electronic journal system that partially implements the proposed model are reported. ...
A semantic model for scholarly electronic publishing is proposed, in which the article conclusion is specified by the author and recorded in a machine-understandable format, enabling semantic retrieval ...
This paper reports the results of a partial implementation of the model as a prototype of a journal submission system. ...
doi:10.3233/sw-130111
fatcat:235ypjooibf5ld6dpvquh4mjni
Page 149 of Linguistics and Language Behavior Abstracts: LLBA Vol. 23, Issue 1
[page]
1989
Linguistics and Language Behavior Abstracts: LLBA
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A survey of relevant literature re- veals four explanations to this question: genetic, functional, probabilis- tic/statistical, & causal (deductive-nomological). ...
A prototype model is used as the basis for discussion. ...
Optimization Models of Sound Systems Using Genetic Algorithms
2003
Computational Linguistics
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In this study, optimization models using genetic algorithms (GAs) are proposed to study the configuration of vowels and tone systems. ...
The GA model proposed for the study of tone systems uses a Pareto ranking method that is highly applicable for dealing with optimization problems having multiple criteria. ...
The second author is also supported by a grant from the Ministry of Education, Science, Sports and Culture of Japan, no. 11610512. We thank C. C. ...
doi:10.1162/089120103321337412
fatcat:3ofraf6hjnf6zlthdie4ykjcqq
Hybridizing Differential Evolution With A Genetic Algorithm For Color Image Segmentation
2016
Zenodo
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This paper proposes a hybrid of differential evolution and genetic algorithms to solve the color image segmentation problem. ...
Clustering based color image segmentation algorithms segment an image by clustering the features of color and texture, thereby obtaining accurate prototype cluster centers. ...
Extensive experimentation was conducted on images from Berkeley segmentation database. ...
doi:10.5281/zenodo.162592
fatcat:whliqlmobbdn3knmbftwi5xsdu
Alternative approach for learning and improving the MCDA method PROAFTN
2011
International Journal of Intelligent Systems
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As a result, a massive amount of information is located in these databases; the knowledge within them is most likely important, but has yet to be identified or expressed. ...
Introduction There are huge amounts of data being collected in databases every day. ...
doi:10.1002/int.20476
fatcat:rpm2e7easza2jiii6upxez3nni
AI integration for enhanced decision support
1992
Proceedings of the Twenty-Fifth Hawaii International Conference on System Sciences
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This paper provides a perspective that is problem driven and suggests that AI integration is a matching process of problems/sub-problems with appropriate AI or other problem support technologies which ...
As applied AI has matured and developed beyond Expert Systems to include Neural Nets, Genetic Algorithms, Model Based Systems, Fuzzy Logic, Natural Language and Case-based Reasoning, the need to provide ...
Rather it is a how best situation. That is, how best can we solve or address a particular problem with the portfolio of AI and conventional DSS tools available. ...
doi:10.1109/hicss.1992.183473
fatcat:qlzehwylanb5nal4jzagsro7cq
Evaluation of human-readable annotation in biomolecular sequence databases with biological rule libraries
1999
Bioinformatics
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Motivation: Computer-based selection of entries from sequence databases with respect to a related functional description, e.g. with respect to a common cellular localization or contributing to the same ...
Results: The prototype of a software system, the Meta_A(nnotator) program, is described and the results of its application to sequence attribute assignment and sequence selection problems, such as cellular ...
The result of this deduction is called the primary attribute for the database entry. ...
doi:10.1093/bioinformatics/15.7.528
pmid:10487860
fatcat:yzaukvyf4beovgpled5qhod5vm
Application of knowledge base design techniques to genetic markers
1995
Proceedings of the fourth international conference on Information and knowledge management - CIKM '95
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This process is supported by a knowledge base design tool, which we call WEAVE, that creates a prototype knowledge base when given a data model definition by a knowledge base developer. ...
We show how our knowledge base design process can be used to develop a data model for genetic markers, which are biological constructs used to search for genes associated with genetic diseases. ...
Graphs are also the foundation of a useful genetics database system. ...
doi:10.1145/221270.221624
dblp:conf/cikm/Graves95
fatcat:s2n6bgey3bgnfnzftojapg5dcu
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