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Prospective motion correction with volumetric navigators (vNavs) reduces the bias and variance in brain morphometry induced by subject motion

M. Dylan Tisdall, Martin Reuter, Abid Qureshi, Randy L. Buckner, Bruce Fischl, André J.W. van der Kouwe
2016 NeuroImage  
the volumetric navigator (vNav) prospective motion correction system significantly reduces the motion-induced bias and variance in morphometry. *, A.  ...  Recent work has demonstrated that subject motion produces systematic biases in the metrics computed by widely used morphometry software packages, even when the motion is too small to produce noticeable  ...  The volumetric navigator (vNavs) system allows the scanner to track the subject's head during the scan and prospectively correct for subject motion (Tisdall et al., 2012 , Hess et al. (2011 ). vNavs are  ... 
doi:10.1016/j.neuroimage.2015.11.054 pmid:26654788 pmcid:PMC4754677 fatcat:cnb6nxq6ibgj5np5fzp372o37u

Reliability and Reproducibility of T1-weighted images: comparing MPRAGE and Prospective Motion Correction with Volumetric Navigators [article]

Lei Ai, R. Cameron Craddock, Nim Tottenham, Stanley Colcombe, Michael Milham, Alexandre R. Franco
2019 bioRxiv   pre-print
New large neuroimaging studies, such as the ABCD and HCP Development studies are adopting a new T1-weighted imaging sequence with volumetric navigators (vNav) in favor of the more traditional 3-Dimensional  ...  Reliability and reproducibility were assessed with a subset of subjects (N=61) that performed two MPRAGE and two vNav sequences within the same imaging session.  ...  prospective volumetric navigators (here referred to as the "vNav" sequence).  ... 
doi:10.1101/666289 fatcat:qd2o2x7j2bgp3p2mwlnjjflzui

Head motion during MRI acquisition reduces gray matter volume and thickness estimates

Martin Reuter, M. Dylan Tisdall, Abid Qureshi, Randy L. Buckner, André J.W. van der Kouwe, Bruce Fischl
2015 NeuroImage  
We show that volume and thickness estimates of the cortical gray matter are biased by head motion with an average apparent volume loss of roughly 0.7%/mm/min of subject motion.  ...  A systematic effect can be problematic since factors of interest like age, disease, and treatment are often correlated with both a structural change and the amount of head motion in the scanner, confounding  ...  BF's interests were reviewed and are managed by Massachusetts General Hospital and Partners HealthCare in accordance with their conflict of interest policies.  ... 
doi:10.1016/j.neuroimage.2014.12.006 pmid:25498430 pmcid:PMC4300248 fatcat:3woqrb6x6vgcrbv7nx43j2iuxm

Prospective head motion correction using FID-guided on-demand image navigators

Maryna Waszak, Pavel Falkovskiy, Tom Hilbert, Guillaume Bonnier, Bénédicte Maréchal, Reto Meuli, Rolf Gruetter, Tobias Kober, Gunnar Krueger
2016 Magnetic Resonance in Medicine  
Purpose: We suggest a motion correction concept that employs free-induction-decay (FID) navigator signals to continuously monitor motion and to guide the acquisition of image navigators for prospective  ...  Co-registration of the image navigator to a reference provides rigid-body-motion parameters to facilitate prospective motion correction.  ...  ACKNOWLEDGMENTS The authors wish to thank Sebastian M.  ... 
doi:10.1002/mrm.26364 pmid:27529516 fatcat:y7m6p2rjszd35e6mxqlt7wyyeq

Is it Time to Switch Your T1W Sequence? Assessing the Impact of Prospective Motion Correction on the Reliability and Quality of Structural Imaging

Lei Ai, R. Cameron Craddock, Nim Tottenham, Jonathan P Dyke, Ryan Lim, Stanley Colcombe, Michael Milham, Alexandre R. Franco
2020 NeuroImage  
prospective motion correction (PMC) in favor of the more traditional 3-Dimensional Magnetization-Prepared Rapid Gradient-Echo Imaging (MPRAGE) sequence.  ...  In conclusion, morphometric measurements evaluated here showed high inter-sequence reliability between the MPRAGE and MPRAGE+PMC sequences, especially in images with low head motion.  ...  Acknowledgments We would like to thank the participants and parents for participating in the Healthy Brain Network Initiative.  ... 
doi:10.1016/j.neuroimage.2020.117585 pmid:33248256 pmcid:PMC7898192 fatcat:ixy7u6cok5cvpexbjjwyebrrmy

Extending the Human Connectome Project across ages: Imaging protocols for the Lifespan Development and Aging projects

Michael P. Harms, Leah H. Somerville, Beau M. Ances, Jesper Andersson, Deanna M. Barch, Matteo Bastiani, Susan Y. Bookheimer, Timothy B. Brown, Randy L. Buckner, Gregory C. Burgess, Timothy S. Coalson, Michael A. Chappell (+29 others)
2018 NeuroImage  
changes in the healthy human brain.  ...  hardware changes, the need to reduce the total amount of scanning per participant, and/or the additional challenges of working with young and elderly populations.  ...  Acknowledgements Research reported in this publication was supported by grants U01MH109589, U01MH109589-S1, U01AG052564, and U01AG052564-S1 and by the 14 NIH Institutes and Centers that support the NIH  ... 
doi:10.1016/j.neuroimage.2018.09.060 pmid:30261308 pmcid:PMC6484842 fatcat:bf3sbvie4jbelp5dnmpeehg47m

Graded Variation In Cortical T1w/T2w Myelination During Adolescence [article]

Graham L. Baum, John C. Flournoy, Matthew F. Glasser, Michael P. Harms, Patrick Mair, Ashley Sanders, Deanna M. Barch, Randy L. Buckner, Susan Bookheimer, Mirella Dapretto, Stephen Smith, Kathleen M. Thomas (+3 others)
2021 bioRxiv   pre-print
AbstractMyelination influences brain connectivity during sensitive periods of development by enhancing neural signaling speed and regulating synapse formation to reduce plasticity.  ...  with the sensorimotor-association (S-A) axis of cortical organization reported by others.  ...  Volumetric navigators (vNavs) were embedded in the T1w and T2w sequences for prospective motion correction and for selective reacquisition of the lines in k-space that were heavily corrupted by subject  ... 
doi:10.1101/2021.12.06.471432 fatcat:cfuelxdmvbewvm7tyovcev2x6m

The New Tics study: A Novel Approach to Pathophysiology and Cause of Tic Disorders

2020 Journal of Psychiatry and Brain Science  
The overall goals of this research are to study the pathophysiology of Provisional Tic Disorder, and to study tic remission (or improvement) in a prospective fashion.  ...  with remote video observation of the child sitting alone.  ...  ACKNOWLEDGMENTS The authors acknowledge the substantial contributions to the New Tics project by the children who participated and their parents, and by research staff.  ... 
doi:10.20900/jpbs.20200012 pmid:32587895 pmcid:PMC7316401 fatcat:zb6bpxhxrfdprog3dcdusirb7a

Tourette syndrome research highlights 2015

Cheryl A. Richards, Kevin J. Black
2016 F1000Research  
Tisdall MD, Reuter M, Qureshi A, et al.: Prospective motion correction with volumetric navigators (vNavs) reduces the bias and variance in brain morphometry induced by subject motion.  ...  Power JD, Schlaggar BL, Petersen SE: Recent progress and outstanding issues in motion correction in resting state fMRI. Neuroimage. 2015; 105: 536-51.  ...  Tisdall and colleagues described a method to limit the effects of movement artifacts by using a motion tracking system to provide prospective motion correction during scanning 36 .  ... 
doi:10.12688/f1000research.8769.1 pmid:27429744 pmcid:PMC4943293 fatcat:7gnsfuoqnbedrfjadid33co23a

Motion Correction in Magnetic Resonance Imaging Using the Signal of Free-Induction-Decay

Maryna Volodimirivna Waszak
The FID navigator was first proposed to reduce respiration-and system-induced B 0 shifts (Hu and Kim, 1994; Pfeuffer et al., 2002) and it was also used to correct for chest motion in abdominal acquisitions  ...  Prospective Head Motion Correction with FID-Triggered Image Navigators 2: An overview of all acquired data from all subjects with the corresponding number of detected motion events and the extra scan  ...  Prospective Head Motion Correction with FID-Triggered Image Navigators FIDnav Triggered Motion Detection and Correction We proposed several ways to calculate an FIDnav from the multi-channel FID signal  ... 
doi:10.5075/epfl-thesis-6963 fatcat:d2r2ic7bvrcp5bi7pvsmrafu6i