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Poster: Observing change in crowded data sets in 3D space - Visualizing gene expression in human tissues

Marcin Rogowski, Carlo V. Cannistraci, Gregorio Alanis-Lobato, Philip Weber, Timothy Ravasi, Jurgen Schulze, Daniel Acevedo-Feliz
2013 2013 IEEE Symposium on 3D User Interfaces (3DUI)  
We have been confronted with a real-world problem of visualizing and observing change of gene expression between different human tissues.  ...  We are discussing the methods we devised to make observing change more convenient in a 3D virtual reality environment.  ...  PROBLEM FORMULATION The task we were presented with was to observe gene expression changes and find relations in the human genome data.  ... 
doi:10.1109/3dui.2013.6550234 dblp:conf/3dui/RogowskiCAWRSF13 fatcat:zj4yeebnfvd7xcyltp2bmzhb34

Poster Abstracts

2014 Integrative and Comparative Biology  
Our data provide the first genetic confirmation of infection by this genus of nematode in humans.  ...  Tissue and developmental expression of three putative Na−coupled cation−chloride cotransporters in Aedes aegypti We evaluated the expression of three genes encoding putative Na−coupled cation−chloride  ...  , quantifying changes in gene expression over time.  ... 
doi:10.1093/icb/icu009 fatcat:bwtfvcxovnfbtaglzx7irgcu7m

Poster Abstracts

2009 Integrative and Comparative Biology  
A machine learning algorithm was used to identify sets of genes whose expression was associated with the fish.  ...  These data reveal that changes in mating behavior are linked to transcriptional differences in the brain and the resulting candidate genes may have utility in studies of the regulation and evolution of  ...  HIF alpha, cryptocyanin 2, arthrodial membrane 6, and anti-LPS all showed changes in mRNA expression during the molt cycle and gene-specific changes in expression in response to salinity stress.  ... 
doi:10.1093/icb/icp003 fatcat:ogzq66svibfcjnht5szojhqk3q

Abstracts: Of Posters

2002 European Journal of Orthodontics  
modifications in threedimensional (3D) hard tissue palatal size and shape in healthy children.  ...  The individual values of crowding/spacing exhibited considerable variation in the three groups.  ...  In 26 subjects occlusal changes were accompanied by favourable soft tissue aesthetic indicators, in four patients the occlusal changes were accompanied by unexpected and unfavourable soft tissue changes  ... 
doi:10.1093/ejo/24.5.529 fatcat:5qqzca5qw5f2hkm7akpzv5mjkm

Abstracts of Posters

2001 European Journal of Orthodontics  
The changes in condylar height and width, fossa height, joint space width, and projection of the TMJ markers were evaluated metrically and visually.  ...  The training set utilized for NN learning was constructed on the basis of data obtained from 210 patients.  ...  the extent of changes according to the period of observation.  ... 
doi:10.1093/ejo/23.5.591 fatcat:fripw6ovcrbdbpob6mcbeh7nve

Poster abstracts

2011 Chromosome Research  
Normal tissue nuclei cutoff value (mean ± 3DS) was 3%. In addition, RET/PTC was investigated by RT-PCR.  ...  An innovative in silico approach was used to analyze gene expression data of epithelial tumors (colon cancer) and to obtain a list of genes with high probability to be involved in CT.  ...  We identified the set of candidate genes that may represent a potential set of biomarkers for prenatal diagnosis of trisomy 21.  ... 
doi:10.1007/s10577-011-9215-6 fatcat:zrydnkyknzc6rjoldsotu7fuwu

Abstracts of Lectures and Scientific Posters

2013 European Journal of Orthodontics  
MATERIALS AND METHOD: Human PDL (hPDL) fibroblasts were subjected to mechanical strain mimicking in vivo orthodontic tooth movement. The expression of PC-1 was assessed.  ...  Comparisons were made, using t-tests, between groups concerning changes during and after treatment. Significance was set at P< 0.05.  ...  Data were visualized with an Optoma HD600X-LV projector and Optoma 3D-XL adaptor and active-shutter 3D glasses.  ... 
doi:10.1093/ejo/cjt078 fatcat:gpiquxvdfzf6dafzc2syenqio4

ACTRIMS-ECTRIMS MSBoston 2014: Poster Sessions 2

2014 Multiple Sclerosis  
No loss of power due to combining data was observed.  ...  Significant changes were observed in AdIl-1 injected mice when compared to control PBS-injected mice (p< 004).  ...  Data concerning visual field, cerebral MRI, visual evoked potential tests and CSF will be reported in the poster.  ... 
doi:10.1177/1352458514547846 pmid:25205049 pmcid:PMC4244175 fatcat:gj757y4jlvejpnrfw22guoit7m

Protein Structure and Biology: Poster Abstracts

2013 Prion  
. 3D-RISM-KH accurately and computationally efficiently accounts for hydrophobic effects, structural solvation and desolvation in various environments, including crowded inter-and intracellular space.  ...  The prion protein (PrP) is expressed in many mammalian tissues, with the highest level of expression found in the brain and central nervous system.  ... 
doi:10.4161/pri.24866 pmid:29095079 pmcid:PMC4031664 fatcat:mijzcvd7vre2dhg2ipk22yaw3i

Abstracts of oral and poster presentations

Jithangi Wanigasinghe
2019 Ceylon Journal of Medical Science  
The concept of IP refers to any product of the human intellect that the law protects from unauthorized use.  ...  Conclusions: The model developed could be used in the future for advanced PopPK analysis using sparse clinical data among different patient groups as PopPK is an underused research area in Sri Lanka.  ...  and expression of a selected catalytic domain of the human Cathepsin K gene (CtsK) in top 10 Escherichia coli expression system of Biotechnology, Horizon Campus, Sri Lanka.  ... 
doi:10.4038/cjms.v56i2.4974 fatcat:cwi75ghg35gdfg4de636v3pyme

European Orthodontic Society 74th Congress, Mainz, 1998. Abstracts of posters

1998 European Journal of Orthodontics  
Phenotypic change is typically marked by changes in myosin heavy chain (MyHC) gene expression where cell fusion marks the point of transition from embryonic MyHC to the expression of adult MyHC isoforms  ...  is consistently expressed in the human masseter.  ... 
doi:10.1093/ejo/20.5.611 fatcat:2jcf5hso4rdylegpur3vjzjbqu

52nd ANMCO Congress Abstracts e-Posters

2021 European Heart Journal, Supplement  
After 5 minutes observation we decided to not stent the lesion, in order to avoid DAPT.  ...  Finding the sweetest spot in balance between ischaemia and haemorragic risk is one of most interesting challenges in platelet aggregation setting in acute coronary syndrome (ACS).  ...  Conclusions: A careful genetic analysis led to the identification of dystrophy gene and the interleukin receptor type-like gene mutations with high expression in the brain cells.  ... 
doi:10.1093/eurheartj/suab064 fatcat:ysj2vax77rbplesxnys6ljetfu

Fortieth Annual Meeting February 17-21, 1996 Baltimore Convention Center Baltimore, Maryland. Wednesday Symposia and Posters, Part IV

1996 Biophysical Journal  
By 'lF NMR spectroscopy, we have observed a conformational change of these cysteines in the presence of some charged lipids.  ...  More specifically, the results obtained indicate a conformational change of G-actin in the presence of DMPG, a negatively charged lipid, and in the presence of positively charged liposomes made ofDMPC  ...  This is observed. By x-ray diffraction we watch spacings in hydrated lipid multilayers after creation of a vapor space within. Over a period of days, the initial uniform spacing of lipids disappears.  ... 
doi:10.1016/s0006-3495(96)79673-x fatcat:rnxknmnpa5eijhgtuqy6mf6h7y

Fortieth Annual Meeting February 17-21, 1996 Baltimore Convention Center Baltimore, Maryland. Tuesday Symposia and Posters, Part V

1996 Biophysical Journal  
tissue.  ...  The technique has been used to monitor the changes related to the maturation of poorly crystalline HA in both synthetic and biologic systems.  ...  A 2.8A resolution data set was collected.  ... 
doi:10.1016/s0006-3495(96)79669-8 fatcat:xlrm3jpo7vdqdew77hwg53t3na
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