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BMC Systems Biology
Description: Based on integrated PPI data and literature, we have developed a human protein complex database with a complex quality index (PCDq), which includes both known and predicted complexes and subunits ... Conclusions: We constructed a new protein complex database PCDq including both predicted and curated human protein complexes. ... The evidence level for each subunit was also determined and summarized as a complex quality index (CQI) for each protein complex. ...doi:10.1186/1752-0509-6-s2-s7 pmid:23282181 pmcid:PMC3521179 fatcat:4lgm4rkjrfbyrp6jjy7ynd6mpm
Motivated by the observation that metadata groups in PPI networks tend to consist of an abundance of interacting triad motifs, we define a 2-club substructure with diameter 2 which possessing triad-rich ... One of the most important problems in complex networks is how to detect metadata groups accurately. ... For HsaHPRD, we use the sets of Human Protein Complex Database with a Complex Quality Index (PCDq)  , Comprehensive Resource of Mammalian Protein Complexes (CORUM)  and H. sapiens GO terms ( ...doi:10.1016/j.physa.2016.10.021 fatcat:k6mdvhe5anbzdexq7dlnb52p4a