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OpenNFT: An open-source Python/Matlab framework for real-time fMRI neurofeedback training based on activity, connectivity and multivariate pattern analysis

Yury Koush, John Ashburner, Evgeny Prilepin, Ronald Sladky, Peter Zeidman, Sergei Bibikov, Frank Scharnowski, Artem Nikonorov, Dimitri Van De Ville
2017 NeuroImage  
A B S T R A C T Neurofeedback based on real-time functional magnetic resonance imaging (rt-fMRI) is a novel and rapidly developing research field.  ...  We demonstrate the functionality of our new framework by describing case studies that include neurofeedback protocols based on brain activity levels, effective connectivity models, and pattern classification  ...  Software overview for neurofeedback based on rt-fMRI As it was outlined above in detail, OpenNFT is an open-source GUIbased multi-processing integrated Python/Matlab framework with a broad functionality  ... 
doi:10.1016/j.neuroimage.2017.06.039 pmid:28645842 fatcat:2n7gi4cqfzcbrps4t7naeibj5e

OpenNFT: An open-source Python/Matlab framework for real-time fMRI neurofeedback training based on activity, connectivity and multivariate pattern analysis

Yury Koush, John Ashburner, Evgeny Prilepin, Ronald Sladky, Peter Zeidman, Sergei Bibikov, Frank Scharnowski, Artem Nikonorov, Dimitri Van De Ville
2017
Neurofeedback based on real-time functional magnetic resonance imaging (rt-fMRI) is a novel and rapidly developing research field.  ...  We demonstrate the functionality of our new framework by describing case studies that include neurofeedback protocols based on brain activity levels, effective connectivity models, and pattern classification  ...  AN, EP and SB are supported by the Samara University (AN, SB: Russian Federation Presidential grant MD-2531.2017.9 and Russian Foundation of Basic Research grant 16-47-630721 r_a) and Aligned Research  ... 
doi:10.3929/ethz-b-000191765 fatcat:v63ir2u3kjdjbizadwbx3qsz6y

Pyneal: Open Source Real-Time fMRI Software

Jeff J. MacInnes, R. Alison Adcock, Andrea Stocco, Chantel S. Prat, Rajesh P. N. Rao, Kathryn C. Dickerson
2020 Frontiers in Neuroscience  
The Pyneal toolkit is python-based software that offers a flexible and user friendly framework for rt-fMRI, is compatible with all three major scanner manufacturers (GE, Siemens, Phillips), and, critically  ...  Here we introduce a free, open-source rt-fMRI package, the Pyneal toolkit, designed to address this limitation.  ...  All authors contributed to the article and approved the submitted version. ACKNOWLEDGMENTS The authors would like to thank Ian Ballard for helpful comments on the manuscript.  ... 
doi:10.3389/fnins.2020.00900 pmid:33041750 pmcid:PMC7522368 fatcat:3dtt4fvvcbap3o3lbsivhujjbq

Approaches for real-time fMRI decoding using multivariate methods

Dirk Schomburg, Johannes Bernarding
2020 unpublished
Niazi, et. al. 2014 ) logistic elastic net regularized regression, linear prediction detrending OpenNFT: An open-source Python/Matlab framework for real-time fMRI neurofeedback training based on activity  ...  , connectivity and multivariate pattern analysis (Yury Koush, John Ashburner, et. al. 2017) overview 2017, open platform fort further development, good post processing Multivariate detrending of fMRI signal  ... 
doi:10.13140/rg.2.2.30352.97287 fatcat:okb6xpk4grajlmlucg4qq35gei