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ENA as an Information Hub

Petra ten Hoopen, Petra ten Hoopen, Ruth Akhtar, Richard Gibson, Bob Vaughan, Nadeem Faruque, Guy Cochrane
2010 Nature Precedings  
doi:10.1038/npre.2010.5108.1 fatcat:kdq2cbgm5vcqfljk5qt2mv27fi

Improvements to services at the European Nucleotide Archive

Rasko Leinonen, Ruth Akhtar, Ewan Birney, James Bonfield, Lawrence Bower, Matt Corbett, Ying Cheng, Fehmi Demiralp, Nadeem Faruque, Neil Goodgame, Richard Gibson, Gemma Hoad (+17 others)
2009 Nucleic Acids Research  
The European Nucleotide Archive (ENA; http://www .ebi.ac.uk/ena) is Europe's primary nucleotide sequence archival resource, safeguarding open nucleotide data access, engaging in worldwide
doi:10.1093/nar/gkp998 pmid:19906712 pmcid:PMC2808951 fatcat:7hx2okpxtbdcvpeoabj2q5emhe

The minimum information about a genome sequence (MIGS) specification

Dawn Field, George Garrity, Tanya Gray, Norman Morrison, Jeremy Selengut, Peter Sterk, Tatiana Tatusova, Nicholas Thomson, Michael J Allen, Samuel V Angiuoli, Michael Ashburner, Nelson Axelrod (+60 others)
2008 Nature Biotechnology  
With the quantity of genomic data increasing at an exponential rate, it is imperative that these data be captured electronically, in a standard format. Standardization activities must proceed within the auspices of open-access and international working bodies. To tackle the issues surrounding the development of better descriptions of genomic investigations, we have formed the Genomic Standards Consortium (GSC). Here, we introduce the minimum information about a genome sequence (MIGS)
more » ... on with the intent of promoting participation in its development and discussing the resources that will be required to develop improved mechanisms of metadata capture and exchange. As part of its wider goals, the GSC also supports improving the 'transparency' of the information contained in existing genomic databases. A wealth of genomic and metagenomic sequences By the end of next year, there will be complete genome sequences of at least draft quality for more than 1,000 bacteria and archaea and 100 eukaryotes 1,2 and for even larger numbers of viruses, organelles and plasmids. With the rapid pace at which new genome sequences are appearing, the need to consider how best to ensure stewardship of these data for the long term has never been more pressing.
doi:10.1038/nbt1360 pmid:18464787 pmcid:PMC2409278 fatcat:gipcbu3lmbhdxbv5irupaaewea

The Effects of Nonlinear Signal on Expression-Based Prediction Performance [article]

Benjamin J Heil, Jake Crawford, Casey S Greene
2022 bioRxiv   pre-print
Faruque, Neil Goodgame, Richard Gibson, … Guy Cochrane Nucleic acids research (2011-01) https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013801/  ...  : 10.1186/1471-2164-10-22 • PMID: 19144180 • PMCID: PMC2649164 The European Nucleotide Archive Rasko Leinonen, Ruth Akhtar, Ewan Birney, Lawrence Bower, Ana Cerdeno-Tárraga, Ying Cheng, Iain Cleland, Nadeem  ... 
doi:10.1101/2022.06.22.497194 fatcat:rwkwcqychffdxnqne56gkmx52u

Comparative anthelmintic efficacy of Arundo donax, Areca catechu, and Ferula assa-foetida against Haemonchus contortus

Syed Nadeem Badar, Zafar Iqbal, Muhammad Sohail Sajid, Hafiz Muhammad Rizwan, Muhammad Shareef, Muhammad Abdullah Malik, Muhammad Nisar Khan
2021 Revista Brasileira de Parasitologia Veterinária  
., 2012; Faruque et al., 2018) .  ... 
doi:10.1590/s1984-29612021028 pmid:34076046 fatcat:m4nxyjtoovavpnz4f5aqrjwmxy

Acknowledgement to Reviewers of Water in 2019

Water Editorial Office Water Editorial Office
2020 Water  
Falletti, Luigi Fan, Yiqun Fan, Yuanchao Fan, Yubing Fan, Yurui Fang, Cheng Fang, Fangxin Fang, Wei-Ta Fang, Yuanhao Fantini, Emanuele Faraci, Carla Faraslis, Ioannis Fareed, Nadeem  ...  Rasem Hasan, Emad Hasan, Faruque Hashemi, Saeed Hashemi-Beni, Leila Hassanzadeh, Hassan Hatamoto, Masushi Hathaway, Jon Hatton, Tracy Hatvani, István Gábor Hawes, Ian Hawkings, Jon Hayashi, Michiya Hayatbini  ... 
doi:10.3390/w12020319 fatcat:nnfayd2pprfrvazx4zsu3dqzoy

The Vibrio cholerae cytotoxin MakA induces noncanonical autophagy resulting in the spatial inhibition of canonical autophagy [article]

Dale Corkery, Aftab Nadeem, Kyaw Min Aung, Ahmed Hassan, Tao Liu, Ramon Cervantes-Rivera, Alf Hakon Lystad, Hui Wang, Karina Persson, Andrea Puhar, Anne Simonsen, Bernt Eric Uhlin (+2 others)
2020 bioRxiv   pre-print
Most NOVC strains lack the cholera toxin gene (ctxAB) and do not cause the typical diarrheal disease, cholera, but have recently been emerging as extra-intestinal pathogens (Faruque et al., 1998) .  ... 
doi:10.1101/2020.07.07.191411 fatcat:sluh2agg5vgk5j5z62kocno3nm

Cloud–Fog–Based Smart Grid Model for Efficient Resource Management

Saman Zahoor, Sakeena Javaid, Nadeem Javaid, Mahmood Ashraf, Farruh Ishmanov, Muhammad Afzal
2018 Sustainability  
Moreover, the grouping of CC with IoT for the formation of an IoE platform can be considered as pervasive sensing facilities by Al Faruque et al. in [4] .  ... 
doi:10.3390/su10062079 fatcat:2ao36xygjnd67mzd3n7lsapi7m

An Active Power Coordination Control Strategy for AC/DC Transmission Systems to Mitigate Subsequent Commutation Failures in HVDC Systems

Xia Zhou, Cangbi Ding, Jianfeng Dai, Zhaowei Li, Yang Hu, Zhaohui Qie, Feng Xue
2021 Electronics  
.; Nadeem, M.F. A Comparison Review on Transmission Mode for Onshore Integration of Offshore Wind Farms: HVDC or HVAC. Electronics 2021, 10, 1489. [CrossRef] 9.  ...  Faruque, M.O.; Zhang, Y.; Dinavahi, V. Detailed modeling of CIGRE HVDC benchmark system using PSCAD/EMTDC and PSB/SIMULINK. IEEE Trans. Power Deliv. 2006, 21, 378–387. [CrossRef]  ... 
doi:10.3390/electronics10233044 fatcat:5eyctit4u5fmvdkj5w7sqe7fpy

Acknowledgment to Reviewers of IJERPH in 2020

IJERPH Editorial Office IJERPH Editorial Office
2021 International Journal of Environmental Research and Public Health  
Hosoyamada, Makoto Hood, Ralph Hossain, Faruque Hooda, Jagmohan Hossain, Sharmin Hooker, Angelo B.  ...  Fajardo Del Castillo, Teresa Fareed, Amber Fajardo-Bullón, Fernando Fareed, Nadeem Fajfr, Miroslav Faresjö, Tomas Fakih, Ali Farfano, Minerva Vanegas Fakoya, Michael Fargnoli, Mario Fala, Nicoletta  ... 
doi:10.3390/ijerph18031259 fatcat:kqqzdz46tzf7nhqmf2ejn3n33y

A Comprehensive Review on Energy Storage Systems: Types, Comparison, Current Scenario, Applications, Barriers, and Potential Solutions, Policies, and Future Prospects

Eklas Hossain, Hossain Mansur Resalat Faruque, Md. Samiul Haque Sunny, Naeem Mohammad, Nafiu Nawar
2020 Energies  
According to Nadeem et al., by mapping the renewable intermittent production profile and by charging and discharging real power accordingly, energy storage systems can effectively mitigate the intermittencies  ...  According to Nadeem et al., by mapping the renewable intermittent production profile and by charging and discharging real power accordingly, energy storage systems can effectively mitigate the intermittencies  ... 
doi:10.3390/en13143651 fatcat:ayyc7ilqdzhtrdthplbikhng2i