A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2021; you can also visit the original URL.
The file type is application/pdf.
Filters
NRG-CING: integrated validation reports of remediated experimental biomolecular NMR data and coordinates in wwPDB
2011
Nucleic Acids Research
Preserved Fulltext
We appreciated Akira Kinjo's advice for setting up a local slave of PDBj Mine. We are especially indebted to all the authors providing wwPDB with the fruits of their labor. ...
We enjoyed the advice and constructive criticism from all CCPN developers in Cambridge and Tim te Beek, Karen Berntsen, Vincent Breukels, Maarten Hekkelman, Wilmar Teunissen and Wouter Touw in Nijmegen ...
AVAILABILITY
Reports Currently all wwPDB members (RCSB-PDB, PDBe, PDBj and BMRB) include links to the NRG-CING reports. These pointers drive the vast majority of traffic to the NRG-CING database. ...
doi:10.1093/nar/gkr1134
pmid:22139937
pmcid:PMC3245154
fatcat:4e3djnotandizjix7im24lesja
The NMR restraints grid at BMRB for 5,266 protein and nucleic acid PDB entries
2009
Journal of Biomolecular NMR
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2017; you can also visit the original URL.
The file type is application/pdf.
et al. in Proteins 59:662-672, 2005; Saccenti and Rosato in J Biomol NMR 40:251-261, 2008). ...
Several pilot experiments have indicated that improvements in older NMR structures can be expected by applying modern software and new protocols (Nabuurs et al. in Proteins 55:483-186, 2004; Nederveen ...
use, distribution, and reproduction in any medium, provided the original author(s) and source are credited. ...
doi:10.1007/s10858-009-9378-z
pmid:19809795
pmcid:PMC2777234
fatcat:gdnkbqlzivebvfy3s6kksbuvem
CING: an integrated residue-based structure validation program suite
2012
Journal of Biomolecular NMR
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2017; you can also visit the original URL.
The file type is application/pdf.
We present a suite of programs, named CING for Common Interface for NMR Structure Generation that provides for a residue-based, integrated validation of the structural NMR ensemble in conjunction with ...
the experimental restraints and other input data. ...
Open Access This article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) ...
doi:10.1007/s10858-012-9669-7
pmid:22986687
pmcid:PMC3483101
fatcat:qi4f6yatcvczbevdljn2kfntc4
Structural basis for proteintrans-splicing by a bacterial intein-like domain - protein ligation without nucleophilic side chains
2013
The FEBS Journal
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2017; you can also visit the original URL.
The file type is application/pdf.
Database The resonance assignments and structure coordinates have been deposited in BMRB (18653) and RCSB (2LWY) Abbreviations Cth, Clostridium thermocellum; BIL, bacterial intein-like; GB1, the B1 domain ...
We determined the first solution NMR structure of a BIL domain, CthBIL4, to guide engineering of split BIL domains for protein ligation. ...
This project was supported by the Academy of Finland (137995), the Sigrid Juselius Foundation and Biocenter Finland (NMR and mass-spectrometry facilities at the Institute of Biotechnology). ...
doi:10.1111/febs.12307
pmid:23621571
fatcat:at4hx2dyafha5hnnjytkjyv35u