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Particularly, the number of long non-coding RNA (lncRNA) has increased sharply from 73 327 to 210 831. ... Additionally, we present expression profile of lncRNA genes by graphs based on public RNA-seq data for human and mouse, as well as predict functions of these lncRNA genes. ... Xiaohua Shen of Tsinghua University for help during the course of this work. Conflict of interest statement. None declared. ...doi:10.1093/nar/gkt1222 pmid:24285305 pmcid:PMC3965073 fatcat:hh44zvq4urefxi43d7xa7c3pv4
Recent studies of deep sequencing had discovered a large number of long non-coding RNAs (lncRNAs) in zebrafish. However, only few of them had been functionally characterized. ... Based on that, a co-expression network upon zebrafish coding and lncRNA genes was constructed and analyzed, and used to predict the Gene Ontology (GO) and the KEGG annotation of lncRNA. ... Competing interests The authors declare that they have no competing interests. ...doi:10.1186/s12864-018-4458-7 pmid:29764394 pmcid:PMC5954278 fatcat:j5adl6a35jh6zjqho72ggfj42a
Xie C, Yuan J, Li H, et al.: NONCODEv4: exploring the world of long non-coding RNA genes. Nucleic Acids Res. 2014; 42(Database issue): D98-D103. ... Arrial RT, Togawa RC, Brigido Mde M: Screening non-coding RNAs in transcriptomes from neglected species using PORTRAIT: case study of the pathogenic fungus paracoccidioides brasiliensis. ... Acknowledgements We are grateful to Mary Lou Mendum for her inputs in preparing the manuscript. ...doi:10.12688/f1000research.6617.1 pmid:26870317 pmcid:PMC4732554 fatcat:qbh5yu5edjeo3fhbq55rsxqixe
Long noncoding RNAs: functional surprises from the RNA world. Genes Dev. 2009;23:1494-1504. doi: 10.1101/gad.1800909. 21. Pink RC, Carter DR. Pseudogenes as regulators of biological function. ... Non-coding RNAs in human disease. Nat Rev Genet.2011;12:861-874. doi: 10.1038/nrg3074. 17. Taft RJ, Pang KC, Mercer TR, Dinger M, Mattick JS. Non-coding RNAs: regulators of disease. ...doi:10.1161/strokeaha.116.013869 pmid:27834745 pmcid:PMC5127755 fatcat:iesjamwmvnflldgzyqrya6p6qu