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Filters
MolPathFinder: Interactive Multi-Dimensional Path Filtering of Molecular Dynamics Simulation Data
[article]
2016
Computer Graphics and Visual Computing (CGVC)
Preserved Fulltext
In this article, we are describing a set of tools to interactively filter and highlight dynamic and complex paths constituted by motions of molecules. ...
Molecular Dynamics Simulations (MDS) play an important role in the field of computational biology. ...
ARCHER supercomputer was used to perform part of the simulations through a project funded by EPSRC-HECBiosim. ...
doi:10.2312/cgvc.20161289
dblp:conf/tpcg/AlharbiLC16
fatcat:p3nhjq6s4raypddx76zctjnvua
SynopSet: Multiscale Visual Abstraction Set for Explanatory Analysis of DNA Nanotechnology Simulations
[article]
2022
arXiv
pre-print
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2022; you can also visit the original URL.
The file type is application/pdf.
We propose a new abstraction set (SynopSet) that has a continuum of visual representations for the explanatory analysis of molecular dynamics simulations (MDS) in the DNA nanotechnology domain. ...
We assessed the effectiveness of SynopSet on 12 DNA nanostructure simulations together with a domain expert. ...
Such data sets can be used to test, for example, multiscale visualization, automated camera management systems, automated identification of events and smart labeling according to scales and events. ...
arXiv:2205.01628v1
fatcat:nr3valvahfg3vikzbpt5bd5dmu