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Classification and Generation of Microscopy Images with Plasmodium Falciparum via Artificial Neural Networks [article]

Rija Tonny Christian Ramarolahy, Esther Opoku Gyasi, Alessandro Crimi
2020 bioRxiv   pre-print
malaria parasites on stained blood smear images using machine learning techniques testing several datasets. ii) investigate transfer learning and further testing in different unseen datasets having different  ...  Conclusion: The proposed deep-learning architecture performed well on a classification task for malaria parasites classification.  ...  Acknowledgements We would like to thank Ekene Kwabena Nwaefuna of Ghana Atomic Energy Commission for participaitng to the validation test between real and synthetic images.  ... 
doi:10.1101/2020.07.21.214742 fatcat:nvylk2msuvbgbhj72bai6p2x6q

Parallel sessions - abstracts of presentations

2005 Acta Tropica  
Each patient had an interview, body temperature check, and thin and thick blood films taken.  ...  As a result, a higher proportion of fever episodes in children are not due to malaria but to other causes, and this has important implications for fever case management.  ...  A monitoring and evaluation strategy for the voucher scheme has been defined collaboratively by researchers and the National Malaria Control Programme.  ... 
doi:10.1016/j.actatropica.2005.06.013 fatcat:gizw75udovexxlxrb6enkv4ade

Plasmodium falciparumK76TpfcrtGene Mutations and Parasite Population Structure, Haiti, 2006–2009

Macarthur Charles, Sanchita Das, Rachel Daniels, Laura Kirkman, Glavdia G. Delva, Rodney Destine, Ananias Escalante, Leopoldo Villegas, Noah M. Daniels, Kristi Shigyo, Sarah K. Volkman, Jean W. Pape (+1 others)
2016 Emerging Infectious Diseases  
Malaria parasites digest hemoglobin and in the process release cationic alpha-hematin, which is toxic to the red blood cell (RBC) and developing parasite.  ...  In a cross-sectional study, 2082 people living with HIV (PLWHIV) were evaluated for presence of malaria parasite by expert malaria microscopy of Giemsa stained thick blood film over a one year period.  ...  Of these, 618 had thick smear microscopy readings.  ... 
doi:10.3201/eid2205.150359 pmid:27089479 pmcid:PMC4861504 fatcat:vssqgctonfhyrc7k6zhwf5zhke

Deep Learning in Image Cytometry: A Review

Anindya Gupta, Philip J. Harrison, Håkan Wieslander, Nicolas Pielawski, Kimmo Kartasalo, Gabriele Partel, Leslie Solorzano, Amit Suveer, Anna H. Klemm, Ola Spjuth, Ida‐Maria Sintorn, Carolina Wählby
2018 Cytometry Part A  
In this review, we focus on deep learning and how it is applied to microscopy image data of cells and tissue samples.  ...  Artificial intelligence, deep convolutional neural networks, and deep learning are all niche terms that are increasingly appearing in scientific presentations as well as in the general media.  ...  Ewert Bengtsson, and Petter Ranefall for their appreciative suggestions. LITERATURE CITED  ... 
doi:10.1002/cyto.a.23701 pmid:30565841 pmcid:PMC6590257 fatcat:dszbcsfncrhxnazsxopjkbe3ju

Human African Trypanosomiasis, Sleeping Sickness [chapter]

2003 Tropical Neurology  
For almost 25 years, he has been involved in the management and conduct of clinical trials on drugs and vaccines against neglected tropical and poverty-related diseases, mainly in low income countries.  ...  Throughout his training and professional career, he has had the privilege of becoming involved in most aspects of drug research and development, including gene cloning and parasite cultivation, drug screening  ...  The Ministry of Health and local authorities in South Sudan kindly authorised this research.  ... 
doi:10.1201/9781498713436-25 fatcat:2hjb4kkdyrdp3dtp5qihbtdfrq

HIV Nursing and Symptom Management

Anne Moorman
1998 Emerging Infectious Diseases  
Acknowledgments We thank the staff members at the hospitals; local health departments; and county-, district-, prefecture-, and provinciallevel centers for disease control and prevention for their valuable  ...  Acknowledgments We thank the New York State Department of Health, the New York Blood Center, and the Blood Bank and Central Laboratory staff of New York-Presbyterian Hospital-Weill Cornell Medical Center  ...  Malaria parasites were detected by microscopy (Giemsastained blood films) and PCR as described (5) .  ... 
doi:10.3201/eid0404.980436 fatcat:hdmm4dspcre4nejrnb4xyry56i

Borna Disease

Carolyn Hatalski
1997 Emerging Infectious Diseases  
Acknowledgments We thank the staff members at the hospitals; local health departments; and county-, district-, prefecture-, and provinciallevel centers for disease control and prevention for their valuable  ...  Acknowledgments We thank the New York State Department of Health, the New York Blood Center, and the Blood Bank and Central Laboratory staff of New York-Presbyterian Hospital-Weill Cornell Medical Center  ...  Malaria parasites were detected by microscopy (Giemsastained blood films) and PCR as described (5) .  ... 
doi:10.3201/eid0302.970205 pmid:9204293 pmcid:PMC2627619 fatcat:5kbjfjkfrncdvpmtvmrnauxinq

Central Line Infection [chapter]

Adeel Abbasi, Francis DeRoos, José Artur Paiva, J.M. Pereira, Brian G. Harbrecht, Donald P. Levine, Patricia D. Brown, Lara Wijayasiri, Andrew Rhodes, Maurizio Cecconi, Jonathan R. Egan, Marino S. Festa (+88 others)
2012 Encyclopedia of Intensive Care Medicine  
Alexandre Mebazaa, Alan Cass, and Martin Gallagher for their useful advice in the development of this manuscript.  ...  In catheterized patients, pyuria (greater than 10 white blood cells/mL) is specific but insensitive for the presence of bacteriuria.  ...  Although fever and an abnormal white blood cell count (WBC) may be present, they are not invariably so.  ... 
doi:10.1007/978-3-642-00418-6_1326 fatcat:7d7sg3mu5fhl3leje6x5pbr4iy

Coronavirus [chapter]

Adeel Abbasi, Francis DeRoos, José Artur Paiva, J.M. Pereira, Brian G. Harbrecht, Donald P. Levine, Patricia D. Brown, Lara Wijayasiri, Andrew Rhodes, Maurizio Cecconi, Jonathan R. Egan, Marino S. Festa (+88 others)
2012 Encyclopedia of Intensive Care Medicine  
Alexandre Mebazaa, Alan Cass, and Martin Gallagher for their useful advice in the development of this manuscript.  ...  In catheterized patients, pyuria (greater than 10 white blood cells/mL) is specific but insensitive for the presence of bacteriuria.  ...  Although fever and an abnormal white blood cell count (WBC) may be present, they are not invariably so.  ... 
doi:10.1007/978-3-642-00418-6_3072 fatcat:tyu35o4c7bchzp2tvrkgomlaa4

Abstracts for Supplement

2010 International Journal of Infectious Diseases  
MIC50, MIC90 values for YF-13-1 were each 0.25 mg/L and 1 mg/L against ciprofloxacin-susceptible and levofloxacin-susceptible S.aureus strains.  ...  Whereas, the YF-13-1 MIC range for E.coli, K. peumoniae, Proteus, Serratia marcescens, E. aerogenes and cloacae were 0.008-32 mg/L.  ...  For malaria-positive smears parasite species were identified and densities recorded as number of parasites per 200 WBC.  ... 
doi:10.1016/j.ijid.2010.02.001 fatcat:j5ee6nbyafh6zo4sob3vmasrtq

Antibiotic Resistance in Escherichia coli from Nigerian Students, 1986-1998

Iruka Okeke
2000 Emerging Infectious Diseases  
Her research interest includes malaria epidemiology and drug-resistant malaria. Acknowledgments We thank Tanya Klimova for editing the manuscript.  ...  PRF12/63) and partly through the routine arbovirus reference diagnostic work of the Centre for Emerging Zoonotic and Parasitic Diseases, National Institute for Communicable Diseases.  ...  Microscopic Examination We dried blood films and stained them with 5% Giemsa solution for 20 min and examined them for the presence of malaria parasites.  ... 
doi:10.3201/eid0604.000413 fatcat:rvotl3oy6fbtnpm3icydckodhu

Waterborne Toxoplasmosis, Northeastern Brazil

Jorg Heukelbach, Vanessa Meyer-Cirkel, Rômulo César Sabóia Moura, Márcia Gomide, José Ajax Nogueira Queiroz, Peter Saweljew, Oliver Liesenfeld
2007 Emerging Infectious Diseases  
Acknowledgment We acknowledge the help of Dolli Lane, Christopher Boyd, and Michael McFall in identifying bacteria on peripheral smears and definitively identifying this case. Dr.  ...  Acknowledgment We thank Christopher Davis and Ifor Beacham of Griffith University for their helpful discussions and contribution to the work described in this article. Dr.  ...  To verify clearance of malaria parasites, 14 days later, thick and thin blood smears were taken from children and assessed for infection by microscopic examination.  ... 
doi:10.3201/eid1302.060686 pmid:17479893 pmcid:PMC2725844 fatcat:y2ca2k43png3zg7mithc5ycmii

Wild Primate Populations in Emerging Infectious Disease Research: The Missing Link?

Nathan Wolfe
1998 Emerging Infectious Diseases  
Acknowledgment We acknowledge the help of Dolli Lane, Christopher Boyd, and Michael McFall in identifying bacteria on peripheral smears and definitively identifying this case. Dr.  ...  Acknowledgment We thank Christopher Davis and Ifor Beacham of Griffith University for their helpful discussions and contribution to the work described in this article. Dr.  ...  To verify clearance of malaria parasites, 14 days later, thick and thin blood smears were taken from children and assessed for infection by microscopic examination.  ... 
doi:10.3201/eid0402.980202 pmid:9621185 pmcid:PMC2640138 fatcat:5gi3unubhbct3gvoil4ntuwpwy

Abstracts for Supplement

2010 International Journal of Infectious Diseases  
despite a negative blood smear in sites with microscopy.  ...  Data on practices in management of patients with suspected malaria before and after the training were collected and compared.Data on out patient consultations for 10 consecutive days in the pre and post  ...  A newly discovered viral enzyme capable of alteration of nucleic acid structure via phosphotriester and phosphodiester bonding complex: An event leading to a new frontier of research and development for  ... 
doi:10.1016/j.ijid.2010.02.002 fatcat:dkj62aswgjfzfo5z5jktl2rvhu

ECTMIH2021 Supplement

2021 Tropical medicine & international health  
His areas of interest include sustainable public health interventions to reduce cardiovascular and infectious disease burdens in Communities.  ...  He went on to continue with his post-graduate medical education at the Unviersity Hospitals of Leicester and the University of Leicester where he also held honorary research fellow positions under the  ...  Concomitantly, midday blood sampling was performed and direct microfilariae diagnostics, as well as for co-infection including malaria and M. perstans, hemoglobin and white blood cell counts were done.  ... 
doi:10.1111/tmi.13632 pmid:34569123 fatcat:fpjupzjtuvd7jgesxxwqjr6zcy
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