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Mirinho: An efficient and general plant and animal pre-miRNA predictor for genomic and deep sequencing data
2015
BMC Bioinformatics
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Several methods exist for the prediction of precursor miRNAs (pre-miRNAs) in genomic or sRNA-seq (small RNA sequences) data produced by NGS (Next Generation Sequencing). ...
, using as input either genomic sequences or sRNA-seq data. ...
and sRNAseq data of plants. ...
doi:10.1186/s12859-015-0594-0
pmid:26022464
pmcid:PMC4448272
fatcat:vf4rmuka4faangigsrimhrpnbq
Computational tools for plant small RNA detection and categorization
2017
Briefings in Bioinformatics
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A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2019; you can also visit the original URL.
The file type is application/pdf.
Frank Johannes is an assistant professor for population epigenetics and epigenomics at the Technical University of Munich. ...
Small RNAs (sRNAs) are important short-length molecules with regulatory functions essential for plant development and plasticity. ...
generated putative pre-miRNA. ...
doi:10.1093/bib/bbx136
pmid:29059285
fatcat:2cgfz3s4tfdx5oo2vwahhq2l3e