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MetaLook: a 3D visualisation software for marine ecological genomics

Thierry Lombardot, Renzo Kottmann, Gregory Giuliani, Andrea de Bono, Nans Addor, Frank Glöckner
2007 BMC Bioinformatics  
Results: We implemented the MetaLook software for visualisation and analysis of marine ecological genomic and metagenomic data with respect to habitat parameters.  ...  Marine ecological genomics can be defined as the application of genomic sciences to understand the structure and function of marine ecosystems.  ...  Johanna Wesnigk for her management work within the MetaFunctions project and Melissa Duhaime for proofreading the manuscript. All authors read and approved the final manuscript.  ... 
doi:10.1186/1471-2105-8-406 pmid:17953757 pmcid:PMC2134934 fatcat:ldxkkepjjvdfzpz3vcwrohfyle

JCoast – A biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes

Michael Richter, Thierry Lombardot, Ivaylo Kostadinov, Renzo Kottmann, Melissa Duhaime, Jörg Peplies, Frank Glöckner
2008 BMC Bioinformatics  
Current sequencing technologies give access to sequence information for genomes and metagenomes at a tremendous speed.  ...  Results: The JCoast software tool was primarily designed to analyse and compare (meta)genome sequences of prokaryotes.  ...  for giving feedback and helpful comments.  ... 
doi:10.1186/1471-2105-9-177 pmid:18380896 pmcid:PMC2311307 fatcat:vbdqmtjs6nceril6d4snhltvre