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Analyzing multi-tag bioimages with BioIMAX colocation mining tools
2012
2012 9th IEEE International Symposium on Biomedical Imaging (ISBI)
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The application of multi-tag protocols in fluorescence microscopy allows the visualization of a large number (> 10) of molecules (i. e. proteins) in a sample (like a tissue section). However, the analysis of such high dimensional bioimages is a difficult task for most of the labs, since software solutions for particular data mining steps are difficult to use or just not available. In this paper we present two new free online tools: MICOLT (Multivariate Image COlocation Tool) and MIFIST
doi:10.1109/isbi.2012.6235802
dblp:conf/isbi/KollingRGNAK12
fatcat:7y5cay4ctzg6zml6snvogqvtzu
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... iate Image Frequent Item Set Tool). Both tools can be used via our recently proposed online bioimage analysis platform BioIMAX, so users can upload their bioimage data, apply the tools and share the results with other invited users based on BioIMAX' concept of shared virtual projects. Data mining with these tools includes the computation and visualization colocation factors well established in the microscopy community (like Mander's score) and association rule mining following the frequent item set principle, thereby supporting large and small scale analysis.
Computer Aided Detection of Polyps in Whitelight- Colonoscopy Images using Deep Neural Networks
2019
Current Directions in Biomedical Engineering
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Early detection of polyps is one central goal of colonoscopic screening programs. To support gastroenterologists during this examination process, deep convolutional neural network can be applied for computer-assisted detection of neoplastic lesions. In this work, a Mask R-CNN architecture was applied. For training and testing, three independent colonoscopy data sets were used, including 2484 HD labelled images with polyps from our clinic, as well as two public image data sets from the MICCAI
doi:10.1515/cdbme-2019-0059
fatcat:gjjmkfmxrncqljcjbvadue77ti
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... 5 polyp detection challenge, consisting of 612 SD and 194 HD labelled images with polyps. After training the deep neural network, best results for the three test data sets were achieved in the range of recall = 0.92, precision = 0.86, F1 = 0.89 (data set A), rec = 0.86, prec = 0.80, F1 = 0.82 (data set B) and rec = 0.83, prec = 0.74, F1 = 0.79 (data set C).
Towards computer aided diagnosis of infective endocarditis in whole-slide images of heart valve tissue using FISH
2021
Current Directions in Biomedical Engineering
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D Franz, P Kuritcyn, C Münzenmayer, M Rathke, V Wiesmann, T Wittenberg: Fraunhofer IIS, Erlangen; J Kikhney, L Kursawe, A Wießner, A Moter: Charité-University Medicine Berlin, Germany, MoKi Analytics GmbH ...
D Franz, P Kuritcyn, C Münzenmayer, M Rathke, V Wiesmann, T Wittenberg: Fraunhofer IIS, Erlangen; J Kikhney, L Kursawe, A Wießner, A Moter: Charité-University Medicine Berlin, Germany, MoKi Analytics GmbH ...
doi:10.1515/cdbme-2021-2119
fatcat:tdkekjmedva2thyoj7fptwe3pu
Buchbesprechungen
2007
Kritische Justiz
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Erhellende Interviews mit Horst Herold
(ehemaliger Präsident des Bundeskriminal-
amtes) und Hans Magnus Enzensberger
schließen das Werk ab. ...
Angesichts dieser Ausgangsparameter hat
Rathke vom Grundansatz her den Versuch
des großen, weit ausholenden Wurfs gewagt. ...
doi:10.5771/0023-4834-2007-3-312
fatcat:755a4gwcs5eoncxtelriuzvifa
Page 226 of Nature Vol. 1, Issue 8
[page]
1869
Nature
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Rathke on Molecular Combinations. Ladenburg on the Molecular Weight of certain Protoxides and Protochlo- rides. Fleury on the Action of Pentachloride of Phosphorus on Phenolic Ethers. ...
Vice-presidents: Pro- fessors Baeyer, Hoffmann, Magnus, and Rose. Secretaries and Vice-Secretaries: Dr. Eichermann, Dr. Martius, Dr. Oppenheim, and Dr. Wichelhaus. Treasurer: Mr. Scherinn. ...
Check list of species (algae, invertebrates and vertebrates) found in the vicinity of the island of helgoland (North Sea, German Bight) — a review of recent records
1993
Helgoländer Meeresuntersuchungen
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Rhodophyceae
Ahnfeltia plicata (Hudson) Fries
Antithamnion ptumula (Ellis) Thur. in Le Jolis
Audouinella membranacea (Magnus) Papenfuss
Bangia atropurpurea (Roth) C. Ag. ...
Cheirocratus sundevallii (Rathke, 1843)
Corophium crassicorne Bruzelius, 1859
Corophium insidosum Crawford, 1937
Corophium sextoni Crawford, 1937
Corophium sp. ...
doi:10.1007/bf02366182
fatcat:irjneak22fag3kd2stu7iejoam
LXXIX. Notices respecting new books
1837
The London Edinburgh and Dublin Philosophical Magazine and Journal of Science
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Magnus. ...
Rathke.--Contributions to the knowledge of the Trilobites, with especial regard to their definite number of Members ; by A. Quenstedt.--On the genus Proeyon; by Prof. Wiegmann.--Fossil quadrumana. ...
doi:10.1080/14786443708649349
fatcat:f3yk6r5hyrbbtm3rvpf2o5pgha
Page 92 of Forest and Stream; A Journal of Outdoor Life, Travel, Nature Study, Shooting, Fishing, Yachting Vol. 18, Issue 5
[page]
1882
Forest and Stream; A Journal of Outdoor Life, Travel, Nature Study, Shooting, Fishing, Yachting
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Mitiller
| as the young eels, claiming that the eel should be considered | nor Rathke, but really Carlo Mondini was the first discov- as an animal which brought forth its young alive, although | erer, ...
principal supporters of the theory that the ecl was ] eels in a tub on the deck of a vessel while on Lake Ontario, | There are at least four distinct types, resulting from the | viviparous were Alburtus Magnus ...
The institution of semiotics in Estonia
2011
Sign Systems Studies
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semiotics which was established in 1820, has been headed by Jean Jacques Friedrich Wilhelm Parrot (1791 -1841 ) in 1821 -1826 , by Johann Friedrich Erdmann (1778 -1846 ) in 1827 -1828 , by Martin Heinrich Rathke ...
Zoosemiotic work included observations in Tallinn Zoo (Aleksei Turovski, Timo Maran), as well as the analysis of dog training (Riin Magnus). ...
doi:10.12697/sss.2011.39.2-4.13
fatcat:ejqz677gc5fmtnhujoit6msng4
Further information on the oribatid fauna (Acarina, Oribatei) of the northern palearctic region: Ukraina and Czechoslovakia
1992
Entomologica Fennica
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Koch, 184 1): 4, 5, 9, 12, 15, 23-25, 34, 34a, 35, 39, 45, 48, 52, 53, 55, 55a,56,57,67, 71 -R. duplicata (Grandjean, 1953 ): 3, 4, 8, 34, 34a,35,52,55,55a, 71,75 -R. loricata (Rathke, 1799 ): 38 HYPOCHTHONIIDAE ...
Steganacarus Ewing, 1917 -S. applicatus (Sellnick, 1920 ): 21, 23, 66,71 S. carinatus (C.L.Koch, 1841 ): 1-5,7-13, 15, 18-24, 26-29 , 30a, 33, 34, 34a, 38, 39, 41-45,47,48,53,56-58,66,67 , 74 , 75 S. magnus ...
doi:10.33338/ef.83570
fatcat:6mzqytpnijb3pdb5aeotcy5eoa
On the Ones Who Hear the Whistle: Towards an Analytical Framework for Analysing Complaint Recipients
2018
MaRBLe
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., 2014; Read & Rama, 2003) . 1 Selina Rathke received a bachelor of arts degree in European Studies at Maastricht University in 2018. ...
Mazerolle & Brown, 2008; Mesmer-Magnus & Viswesvaran, 2005; Moberly, 2014) . Despite their importance, so far only few whistleblowing studies focus explicitly on complaint recipients (e.g. ...
doi:10.26481/marble.2018.v4.644
fatcat:q5zadttjwnal7pulqzonteaoo4
La physiologie française pendant la première moitié du XIXe siècle
1988
Gesnerus
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E. von Baer (1858); Carus G.G. (1859); Rathke H. (1793-1860), en 1860; K.von Siebold, physiologiste (1804-1885), en 1867. ...
Gmelin et Tiedemann, Magnus et Bischoff^réalisent des expériences pour trouver une explication valable, mais les résultats manquent de rigueur. Cependant Magnus s'approche d'une solution positive. ...
doi:10.1163/22977953-04502005
fatcat:fwyt54ols5ak7c2qreino34e3i
Preliminary observations on the mandibles of palaemonoid shrimp (Crustacea: Decapoda: Caridea: Palaemonoidea)
2015
PeerJ
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The semi-rigid, robust mandible has usually been attributed a solely mechanical function in the breaking down of food prior to ingestion, but a recent study of larval Palaemon elegans Rathke, 1837 demonstrated ...
Magnus L. Johnson is an Academic Editor for PeerJ.
Author Contributions • Christopher W. ...
. • Magnus L. Johnson analyzed the data, wrote the paper, reviewed drafts of the paper. ...
doi:10.7717/peerj.846
pmid:25825676
pmcid:PMC4375974
fatcat:fn2lcvzufvduzcft6gywo2l5cq
NEUROLOGICAL SOCIETY OF THE UNITED KINGDOM
1903
The Lancet
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BRUCE showed a woman suffering mainly from Paralysis of the Right Serratus Magnus Muscle. ...
There was also a case in a sheep described by Rathke in 1830 in which a female foetus was attached to the head of a male foetus by an umbilical cord which passed into the skull and ended in a wellformed ...
doi:10.1016/s0140-6736(01)39227-9
fatcat:bgzuqwy3rvab7ooghj3vjsqw2a
The "De Ovorum Gallinaceorum Generationis Primo Exordio, Etc." of Volcher Coiter (Part II, Conclusion)
1933
Annals of medical history
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Albertus Magnus: (Ref. 95, Lib. vi, tract 1, cap. 4: 37.) 89. ...
Not until the middle of the nineteenth century, and then only through the combined labors of Wolff, Pander, von Baer, Reichert, Rathke, Schwann, Bischoff, Remak, KoIIiker and others were the early stages ...
pmid:33944230
pmcid:PMC7945431
fatcat:4c2ynsddofga3jxgpp3infawgi
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