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TFAM detects co-evolution of tRNA identity rules with lateral transfer of histidyl-tRNA synthetase

D. H. Ardell
2006 Nucleic Acids Research  
We present TFAM, an automated, statistical method to classify the identity of tRNAs.  ...  Phylogenomic analysis supports lateral transfer of a eukaryotic-like HisRS into the a-proteobacteria followed by in situ adaptation of the bacterial tDNA His and identity rule divergence.  ...  ACKNOWLEDGEMENTS This work was supported by the National Science Foundation under a grant awarded in 2000 to D.H.A., by awards from the Swedish Research Council, the Swedish Foundation for Strategic Research  ... 
doi:10.1093/nar/gkj449 pmid:16473847 pmcid:PMC1363771 fatcat:2hdkon2xmnavfeo6pzxgtjchga

Forkhead evolution and the FOXC1 inhibitory domain

Christina Fetterman
2011
Mike Walter for his support and guidance throughout the years; for letting me work on a project outside of the lab's main interests. Dr.  ...  Bruce Rannala for initially taking me on as a graduate student. Past and present members of the Walter and Rannala labs for teaching me techniques, providing opinions and having fun along the way.  ...  Mol Biol Evol 22:1107-1118 Yuan J, Amend A, Borkowski J, DeMarco R, Bailey W, Liu Y, Xie G, Blevins R (1999) MULTICLUSTAL: a systematic method for surveying Clustal W alignment parameters.  ... 
doi:10.7939/r3qw57 fatcat:6hjp6akr2zg6dewavhl3jjoqpi