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MRI atlas of the human hypothalamus

Marc Baroncini, Patrice Jissendi, Eglantine Balland, Pierre Besson, Jean-Pierre Pruvo, Jean-Paul Francke, Didier Dewailly, Serge Blond, Vincent Prevot
2012 NeuroImage  
Please find enclosed the revised version of our manuscript "MRI atlas of the human hypothalamus" which we have modified according to the minor comment made by the reviewer#3.  ...  Gaining new insights into the anatomy of the human hypothalamus is crucial for the development of new treatment strategies involving functional stereotactic neurosurgery.  ...  Stevendart (Laboratory of Anatomy) for their skillful help during dissections and the 20 volunteers who agreed to participate in this study.  ... 
doi:10.1016/j.neuroimage.2011.07.013 pmid:21777680 fatcat:p5rhwnjglzdkpp2xv4mmzzd7h4

Contents [chapter]

2021 Textbook on MRI Mapping of the Human Deep Brain  
. . . . 128 4.3 The Ventral Intermediate Nucleus of the Thalamus . . . . . . . . . . . . . . . 131 5 1.3 From the Anatomical Material to the MRI Deep Brain Atlas and 3D Rendering . . . . . . . . . . .  ...  of the Deep Brain . . . . . . . . . . . . . . . . . 38 2.4 The Hypothalamus . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 51 CHAPTER 3  ... 
doi:10.1051/978-2-7598-2576-9.toc fatcat:yebmbfrapfgxddn6uxkuifo4kq

Altered hypothalamic microstructure in human obesity [article]

K. Thomas, F. Beyer, G. Lewe, R. Zhang, S. Schindler, P. Schönknecht, M. Stumvoll, A. Villringer, A.V. Witte
2019 bioRxiv   pre-print
Whether this translates to humans is largely unknown, as non-invasive brain imaging of the hypothalamus remains challenging.  ...  Using a novel multimodal approach with manual segmentation, we here show that body mass index (BMI) selectively predicted higher proton diffusivity within the hypothalamus, indicative of compromised microstructure  ...  MRI data, we performed semi-automated segmentation of the hypothalamus in MeVisLab 4.1.  ... 
doi:10.1101/593004 fatcat:mxnsawtrvbdudounxh7gbj55ra

Higher body mass index is linked to altered hypothalamic microstructure

K. Thomas, F. Beyer, G. Lewe, R. Zhang, S. Schindler, P. Schönknecht, M. Stumvoll, A. Villringer, A. V. Witte
2019 Scientific Reports  
Using two large samples of the general population, we showed that a higher BMI specifically relates to altered microstructure in the hypothalamus, independent from confounders such as age, sex and obesity-associated  ...  Whether this translates to humans is however largely unknown.  ...  European Union, the European Regional Development Fund, and the Free State of Saxony within the framework of the Excellence Initiative; by the Leipzig Research Center for Civilization Diseases (LIFE) at  ... 
doi:10.1038/s41598-019-53578-4 pmid:31758009 pmcid:PMC6874651 fatcat:v42yv5lrb5fy7msz46dxod6lqy

Anatomical location of effective deep brain stimulation electrodes in chronic cluster headache

D. Fontaine, M. Lanteri-Minet, L. Ouchchane, Y. Lazorthes, P. Mertens, S. Blond, G. Geraud, N. Fabre, M. Navez, C. Lucas, F. Dubois, J. C. Sol (+2 others)
2010 Brain  
Our aim was to study the location of the contacts used for chronic stimulation, projecting each contact centre on anatomic atlases.  ...  Deep brain stimulation of the posterior hypothalamus is a therapeutic approach to the treatment of refractory chronic cluster headache, but the precise anatomical location of the electrode contacts has  ...  MRI) and on coronal (F) and axial (G) sections of the 4.7 T 3D MRI-based atlas.  ... 
doi:10.1093/brain/awq041 pmid:20237130 fatcat:vzgi3bd3mffu7okav37vmf3ahm

Preamble [chapter]

2021 Textbook on MRI Mapping of the Human Deep Brain  
the architecture of the human brain.  ...  This made it apparent that an atlas of the 3D MRI anatomy of the deep brain would be necessary, allowing the analysis of structural information (i.e. neuroanatomy).  ...  Finally, there is no precise and detailed MRI atlas of the deep brain.  ... 
doi:10.1051/978-2-7598-2576-9.c002 fatcat:id7ftlj4sfc4jcjhhmt6m5nptm

Volumetric parcellation methodology of the human hypothalamus in neuroimaging: Normative data and sex differences

Nikos Makris, Dick F. Swaab, Andre van der Kouwe, Brandon Abbs, Denise Boriel, Robert J. Handa, Stuart Tobet, Jill M. Goldstein
2013 NeuroImage  
The goals of the present study were to develop a novel method of semi-automated volumetric parcellation for the human hypothalamus that could be used to investigate clinical conditions using MRI and to  ...  1.5 T MRI.  ...  support in the use of the 7 T magnet at MGH, and Jonathan Kaiser, M.S. for help in image construction.  ... 
doi:10.1016/j.neuroimage.2012.12.008 pmid:23247186 pmcid:PMC3575213 fatcat:hv2c5rpvo5dolmh6jyzohvz3au

Development and Evaluation of an Algorithm for the Computer-Assisted Segmentation of the Human Hypothalamus on 7-Tesla Magnetic Resonance Images

Stephanie Schindler, Peter Schönknecht, Laura Schmidt, Alfred Anwander, Maria Strauß, Robert Trampel, Pierre-Louis Bazin, Harald E. Möller, Ulrich Hegerl, Robert Turner, Stefan Geyer, Wang Zhan
2013 PLoS ONE  
We present a computer-assisted algorithm for the manual segmentation of the human hypothalamus using T1-weighted 7T magnetic resonance imaging.  ...  The estimated volumes of the hypothalamus lie within the range of previous histological and neuroimaging results.  ...  Macrostructural boundaries of the hypothalamus in humans Disagreement exists regarding the actual size of the hypothalamus in healthy humans.  ... 
doi:10.1371/journal.pone.0066394 pmid:23935821 pmcid:PMC3720799 fatcat:pkg5dv57dvew3l4yxmejwtupju

A rhesus monkey reference label atlas for template driven segmentation

Jonathan J. Wisco, Douglas L. Rosene, Ronald J. Killiany, Mark B. Moss, Simon K. Warfield, Svetlana Egorova, Ying Wu, Zsusanna Liptak, Jeremy Warner, Charles R.G. Guttmann
2008 Journal of medical primatology  
Methods The atlas was manually created from DE SE legacy MRI data of one behaviorally normal, young, male rhesus monkey and consisted of 14 regions of interest (ROI's).  ...  We have acquired dual-echo spin-echo (DE SE) MRI data of the rhesus monkey brain since 1994 as part of an ongoing study of normal aging.  ...  Acknowledgments This research was funded in part by the following funding agencies: National Institutes of Health (F31-AG 05897, P01-AG00001, P41-RR13218-01, P51-RR 000165, R01-NS35142, R37-AG176090),  ... 
doi:10.1111/j.1600-0684.2008.00288.x pmid:18466282 pmcid:PMC2724263 fatcat:j3l6gv3anvh4tbc6lcmogrz574

The Brain Atlas: A Visual Guide to the Human Central Nervous System (3rd Edn). T.A. Woolsey, J. Hanaway and M.H. Gado

G. J. Ebrahim
2008 Journal of Tropical Pediatrics  
The first edition of the Brain Atlas containing an innovative combination of information on the human brain was published in 1977.  ...  of sections through the brain with MRI scans matched directly to the slices; histological sections through the forebrain, hypothalamus and thalamus, brain stem and the spinal cord; and diagrams of pathways  ...  The first edition of the Brain Atlas containing an innovative combination of information on the human brain was published in 1977.  ... 
doi:10.1093/tropej/fmn026 fatcat:weueofa7t5frvayfjoltl6xbq4

Quantitative magnetic resonance imaging for segmentation and white matter extraction of the hypothalamus

Melanie Spindler, Christiane M. Thiel
2021 Journal of Neuroscience Research  
Therefore, in this study, we investigated the usability of qMRI and diffusion MRI for the purpose of detailed and reproducible manual segmentation of the hypothalamus and data-driven white matter extraction  ...  The hypothalamus' position lateral to the third ventricle and close proximity to white matter tracts including the optic tract, fornix, and mammillothalamic tract display one of the remaining shortcomings  ...  Recently, Neudorfer et al. (2020) developed a high-resolution atlas for individual hypothalamic nuclei and surrounding structures based on 990 subjects from the Human Connectome Project (Glasser et  ... 
doi:10.1002/jnr.24988 pmid:34850453 fatcat:kyokiwfixnenjg34xqd6t4h2lq

Neuroanatomical correlates of hunger and satiation in humans using positron emission tomography

P. A. Tataranni, J.-F. Gautier, K. Chen, A. Uecker, D. Bandy, A. D. Salbe, R. E. Pratley, M. Lawson, E. M. Reiman, E. Ravussin
1999 Proceedings of the National Academy of Sciences of the United States of America  
The central role of the hypothalamus in the origination and͞or processing of feeding-related stimuli may be modulated by the activity of other functional areas of the brain including the insular cortex  ...  Hunger was associated with significantly increased rCBF in the vicinity of the hypothalamus and insular cortex and in additional paralimbic and limbic areas (orbitofrontal cortex, anterior cingulate cortex  ...  Automated algorithms were used to transform each subject's brain MRI into standard atlas coordinates (29) , compute an average of the 11 subjects' MRIs, and superimpose each z-score map onto the averaged  ... 
doi:10.1073/pnas.96.8.4569 pmid:10200303 pmcid:PMC16373 fatcat:bkonkst6gngzjoy5gvfzmvfpvi

An MRI study of age-related white and gray matter volume changes in the rhesus monkey

Jonathan J. Wisco, Ronald J. Killiany, Charles R.G. Guttmann, Simon K. Warfield, Mark B. Moss, Douglas L. Rosene
2008 Neurobiology of Aging  
We applied the automated MRI segmentation technique Template Driven Segmentation (TDS) to dual-echo spin echo (DE SE) images of eight young (5-12 years), six middle-aged (16-19 years) and eight old (24  ...  Corresponding behavioral data for five of the young, five of the middle-aged and seven of the old subjects on the Delayed Non-matching to Sample (DNMS) task, the Delayed-recognition Span Task (DRST) and  ...  Acknowledgements This research was funded in part by the following grants: NIH grants F31-AG05897, P01-AG00001, P41-RR13218-  ... 
doi:10.1016/j.neurobiolaging.2007.03.022 pmid:17459528 pmcid:PMC2605721 fatcat:oa63mrwtxrcvjpu4yarwekf2re

Update of the EPTN atlas for CT- and MR-based contouring in Neuro-Oncology

Daniëlle B.P. Eekers, Dario Di Perri, Erik Roelofs, Alida Postma, Jeanette Dijkstra, Thankamma Ajithkumar, Claire Alapetite, Malin Bromstrand, Neil G Burnet, Valentin Calugaru, Inge Compter, Ida E.M. Coremans (+16 others)
2021 Radiotherapy and Oncology  
The presented update of the neurological contouring atlas was reviewed and approved by 28 experts in the field.  ...  The atlas is available online and includes in total 25 OARs relevant to neuro-oncology, contoured on CT and MRI T1 and FLAIR (3T & 7T).  ...  The authors sincerely thank: Lene Haldbo-Classen, MD PhD, Department of Radiotherapy, Aarhus University Hospital, for sharing her expertise in delineating the frontal lobe, Roel Germ Wanders, technician  ... 
doi:10.1016/j.radonc.2021.05.013 pmid:34015385 fatcat:k5vxh5aaizf7hnsfyuu4hxx2wm

MRI Atlas of the Human Deep Brain

Jean-Jacques Lemaire, Antonio De Salles, Guillaume Coll, Youssef El Ouadih, Rémi Chaix, Jérôme Coste, Franck Durif, Nikos Makris, Ron Kikinis
2019 Frontiers in Neurology  
Mastering detailed anatomy of the human deep brain in clinical neurosciences is challenging.  ...  The atlas may also be used by computer scientists who are interested in deciphering the topography of this complex region.  ...  The atlases of the human deep brain most used in clinical neurosurgery relies on histological studies (1) (2) (3) (4) . They are both, anatomic books, and stereotactic atlases.  ... 
doi:10.3389/fneur.2019.00851 pmid:31507507 pmcid:PMC6718608 fatcat:m3ehv5i6mba7pcyasp5esp7kkm
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