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MMseqs2 desktop and local web server app for fast, interactive sequence searches
[article]
2018
bioRxiv
pre-print
Preserved Fulltext
The MMseqs2 desktop and web server app facilitates interactive sequence searches through custom protein sequence and profile databases on personal workstations. ...
Source code, prebuilt desktop app packages for Windows, macOS and Linux, Docker images for the web server application, and a demo web server are available at https://search.mmseqs.com. ...
FUNDING
This work was supported by the European Research Council in the framework of its Horizon 2020 Framework Programme for Research and Innovation (grant "Virus-X", project no. 685778). ...
doi:10.1101/419895
fatcat:sqos3urkoffbtkhkow3acw4qtq
RCSB PDB next-generation data delivery and search services
2020
Acta Crystallographica Section A: Foundations and Advances
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2021; you can also visit the original URL.
The file type is application/pdf.
Examples of the searches integrated by the aggregator are mmseqs2 sequence search (1), BioZernike structure shape search (2), and sequence motif search. ...
The data model is based on the PDBx/mmCIF dictionary (http://mmcif.wwpdb.org/) with extensions that facilitate usage and delivery for the RCSB PDB website and web services. ...
MMseqs2 desktop and local web server app for fast, interactive sequence searches. Bioinformatics, doi: 10.1093/bioinformatics/bty1057 (2019). Dmytro Guzenko, Stephen K. Burley, Jose M. Duarte. ...
doi:10.1107/s0108767320099298
fatcat:yvixhxqrt5aofi45w4iuldmyty