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MIRPIPE: quantification of microRNAs in niche model organisms
2014
Computer applications in the biosciences : CABIOS
Preserved Fulltext
Niche model organisms lacking genomic sequences cannot be analyzed by such tools. ...
MicroRNAs (miRNAs) represent an important class of small non-coding RNAs regulating gene expression in eukaryotes. ...
Sequence differences between taxa hamper quantification, especially if no genomic or miRNA data for the studied organism are available as in the case of niche model organisms. ...
doi:10.1093/bioinformatics/btu573
pmid:25165094
pmcid:PMC4816158
fatcat:ixrdbhy4pjhmzilhjk2xgt2m3e
PmiRExAt: plant miRNA expression atlas database and web applications
2016
Database: The Journal of Biological Databases and Curation
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2020; you can also visit the original URL.
The file type is application/pdf.
Custom expression analysis feature enables expression analysis of novel miRNA in total 117 datasets. ...
Novel insights gained through data mining in publically available rich resource of sRNA data will help in designing biotechnology-based approaches for crop improvement to enhance plant yield and nutritional ...
Funding This work was financially supported by the core grant of National Agri-Food Biotechnology Institute (NABI), Mohali, India an autonomous institute of Department of Biotechnology, Government of India ...
doi:10.1093/database/baw060
pmid:27081157
pmcid:PMC4830907
fatcat:eeoccbanibhgrmqek6unal7u34