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MINT: the Molecular INTeraction database
<span title="2007-01-03">2007</span>
<i title="Oxford University Press (OUP)">
<a target="_blank" rel="noopener" href="https://fatcat.wiki/container/hfp6p6inqbdexbsu4r7usndpte" style="color: black;">Nucleic Acids Research</a>
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Here we present MINT, a database (http ://cbm.bio.uniroma2.it/mint/ index.html) designed to store data on functional interactions between proteins. ...
Protein interaction databases represent unique tools to store, in a computer readable form, the protein interaction information disseminated in the scientific literature. ...
We like to thank the students of the Ph.D. program in Molecular and Cellular Biology of the University of Rome Tor Vergata for help in database curation. ...
<span class="external-identifiers">
<a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/nar/gkl950">doi:10.1093/nar/gkl950</a>
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MINT, the molecular interaction database: 2012 update
<span title="2011-11-16">2011</span>
<i title="Oxford University Press (OUP)">
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MINT has adopted the PSI-MI standards for the annotation and for the representation of molecular interactions and is a member of the IMEx consortium. ...
MINT (http://mint.bio.uniroma2.it/mint) is a public repository for molecular interactions reported in peer-reviewed journals. ...
MINT, the Molecular INTeraction database, participates in this community effort. ...
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<a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/nar/gkr930">doi:10.1093/nar/gkr930</a>
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The IntAct molecular interaction database in 2012
<span title="2011-11-24">2011</span>
<i title="Oxford University Press (OUP)">
<a target="_blank" rel="noopener" href="https://fatcat.wiki/container/hfp6p6inqbdexbsu4r7usndpte" style="color: black;">Nucleic Acids Research</a>
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IntAct is an open-source, open data molecular interaction database and toolkit. ...
In response to the growing data volume and user requests, IntAct now provides a two-tiered view of the interaction data. ...
ACKNOWLEDGEMENTS The authors thank Paula de Matos and the EBI ChEBI team for the development of the chemical search module in IntAct. ...
<span class="external-identifiers">
<a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/nar/gkr1088">doi:10.1093/nar/gkr1088</a>
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The IntAct molecular interaction database in 2010
<span title="2009-10-22">2009</span>
<i title="Oxford University Press (OUP)">
<a target="_blank" rel="noopener" href="https://fatcat.wiki/container/hfp6p6inqbdexbsu4r7usndpte" style="color: black;">Nucleic Acids Research</a>
</i>
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IntAct is an open-source, open data molecular interaction database and toolkit. ...
In response to the growing data volume and user requests, IntAct now provides a two-tiered view of the interaction data. ...
ACKNOWLEDGEMENTS The authors thank Paula de Matos and the EBI ChEBI team for the development of the chemical search module in IntAct. ...
<span class="external-identifiers">
<a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/nar/gkp878">doi:10.1093/nar/gkp878</a>
<a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/19850723">pmid:19850723</a>
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A database of integrated molecular and phytochemical interactions of the foxm1 pathway for lung cancer
<span title="2020-08-25">2020</span>
<i title="Taylor & Francis">
figshare.com
</i>
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The downstream significant protein modules of the FoxM1 pathway were extracted by the Molecular Complex Detection (MCODE) and the maximal clique (Mclique) algorithms. ...
We provided two case studies to demonstrate the usefulness of our database. Our results suggested that the combination of various phytochemicals is effective in the treatment of lung cancer. ...
MEA-2
33
Naringenin
citrus fruit
34
Paclitaxel
European yew
35
Panax ginseng
Korean ginsengs
36
Perillyl Alcohol
cherries, caraway seeds, mint
37
Phenethyl Isothiocyanate
cruciferous ...
<span class="external-identifiers">
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The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases
<span title="2013-11-13">2013</span>
<i title="Oxford University Press (OUP)">
<a target="_blank" rel="noopener" href="https://fatcat.wiki/container/hfp6p6inqbdexbsu4r7usndpte" style="color: black;">Nucleic Acids Research</a>
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IntAct (freely available at http://www.ebi.ac.uk/ intact) is an open-source, open data molecular interaction database populated by data either curated from the literature or from direct data depositions ...
All data manually curated by the MINT curators have been moved into the IntAct database at EMBL-EBI and are merged with the existing IntAct dataset. ...
The MINT (Molecular INTeraction) database was created in 2002 at the University of Tor Vergata, Rome (7), independent of IntAct in funding and organization, but with very similar aims, curating experimentally ...
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<a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/24234451">pmid:24234451</a>
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MINT: a Molecular INTeraction database
<span title="2001-12-20">2001</span>
<i title="Wiley">
<a target="_blank" rel="noopener" href="https://fatcat.wiki/container/kn6dhptylrb77b5atyiom5ysjm" style="color: black;">FEBS Letters</a>
</i>
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Here we present MINT, a database (http ://cbm.bio.uniroma2.it/mint/ index.html) designed to store data on functional interactions between proteins. ...
Protein interaction databases represent unique tools to store, in a computer readable form, the protein interaction information disseminated in the scientific literature. ...
We like to thank the students of the Ph.D. program in Molecular and Cellular Biology of the University of Rome Tor Vergata for help in database curation. ...
<span class="external-identifiers">
<a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/s0014-5793(01)03293-8">doi:10.1016/s0014-5793(01)03293-8</a>
<a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/11911893">pmid:11911893</a>
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alfaNET: A Database of Alfalfa-Bacterial Stem Blight Protein–Protein Interactions Revealing the Molecular Features of the Disease-Causing Bacteria
<span title="2021-08-03">2021</span>
<i title="MDPI AG">
<a target="_blank" rel="noopener" href="https://fatcat.wiki/container/3loumxx7kzamnlu4h6x3xoz6ay" style="color: black;">International Journal of Molecular Sciences</a>
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The database alfaNET is an attempt to assist researchers by providing comprehensive Pseudomonas proteome annotations, as well as a host–pathogen interactome tool, which predicts the interactions between ...
Users can also browse and search the database using particular keywords or proteins with a specific length. ...
To employ the homology-based interolog approach, various PPI databases of The International Molecular Exchange Consortium (IMEX) [31] were used as templates. al-faNET implements five major databases ...
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Merging and scoring molecular interactions utilising existing community standards: tools, use-cases and a case study
<span title="2015-02-04">2015</span>
<i title="Oxford University Press (OUP)">
<a target="_blank" rel="noopener" href="https://fatcat.wiki/container/ejkvir3kzbdojf5kygupkidsca" style="color: black;">Database: The Journal of Biological Databases and Curation</a>
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We have developed both a merging algorithm and a scoring system for molecular interactions based on the proteomics standard initiative-molecular interaction standards. ...
Merging and scoring of data are commonly required operations after querying for the details of specific molecular interactions, to remove redundancy and assess the strength of accompanying experimental ...
MIscore distribution proportion for the molecular interaction databases in Table 3 . ...
<span class="external-identifiers">
<a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/database/bau131">doi:10.1093/database/bau131</a>
<a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/25652942">pmid:25652942</a>
<a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC4316181/">pmcid:PMC4316181</a>
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GreeningDB: A Database of Host–Pathogen Protein–Protein Interactions and Annotation Features of the Bacteria Causing Huanglongbing HLB Disease
<span title="2021-10-08">2021</span>
<i title="MDPI AG">
<a target="_blank" rel="noopener" href="https://fatcat.wiki/container/3loumxx7kzamnlu4h6x3xoz6ay" style="color: black;">International Journal of Molecular Sciences</a>
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The database is freely available at http://bioinfo.usu.edu/GreeningDB/. ...
We hope that by providing these characteristics, GreeningDB can become a central resource to retrieve HLB-related protein annotations, and thus, aid the community that is pursuing the development of molecular-based ...
Acknowledgments: The authors sincerely thank Shelby McCowan (Linux Systems Administrator) who helped with the designing of the database and implementing the database successfully on an HPC cluster. ...
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The IMEx coronavirus interactome: an evolving map of Coronaviridae–host molecular interactions
<span title="2020-01-01">2020</span>
<i title="Oxford University Press (OUP)">
<a target="_blank" rel="noopener" href="https://fatcat.wiki/container/ejkvir3kzbdojf5kygupkidsca" style="color: black;">Database: The Journal of Biological Databases and Curation</a>
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Among the different strategies that are being used to understand the disease and develop effective treatments, the study of physical molecular interactions can provide fine-grained resolution of the mechanisms ...
We present a curated dataset of physical molecular interactions focused on proteins from SARS-CoV-2, SARS-CoV-1 and other members of the Coronaviridae family that has been manually extracted by International ...
Funding The IntAct and Complex Portal databases and EMBL-EBI-based authors received funding from EMBL core funding, Open Targets ...
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Benchmarking of the 2010 BioCreative Challenge III text-mining competition by the BioGRID and MINT interaction databases
<span title="">2011</span>
<i title="Springer Nature">
<a target="_blank" rel="noopener" href="https://fatcat.wiki/container/n5zrklrhlzhtdorf4rk4rmeo3i" style="color: black;">BMC Bioinformatics</a>
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The BioGRID and MINT protein interaction databases both participated in the generation of the test publication set for gene normalization, annotated the development and test sets for article classification ...
, and curated the test set for interaction method classification. ...
The possibility of deconstructing biological responses into constituent molecular interactions has motivated databases such as BioGRID [15, 16] and MINT (Molecular INTeraction) [17, 18] to undertake ...
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Chemical structure components and antifungal activity of mint essential oil
<span title="">2020</span>
<i title="National Library of Serbia">
<a target="_blank" rel="noopener" href="https://fatcat.wiki/container/d334ouzaejc45e7oidjpyw7vbu" style="color: black;">Journal of the Serbian Chemical Society</a>
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By the application of GC/MS analysis of essential mint oil, 27 components were identified. ...
The quantitative structure-retention relationship (QSRR) was employed to predict the retention time (RT) of Menthapiperita essential oil compounds obtained in GC/MS analysis, using twelve molecular descriptors ...
Acknowledgements: The results are part of the research from the Project No. 31029 ...
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Isolation of (R)-(+)-Pulegone from the European Pennyroyal Mint, Mentha Pulegium
<span title="">2002</span>
<i title="Springer Nature">
<a target="_blank" rel="noopener" href="https://fatcat.wiki/container/gyewtvlsrvd43nfu37beucb3k4" style="color: black;">Chemical Educator</a>
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The terpene obtained, (R)-(+)-pulegone, is characterized spectroscopically, employing at a minimum mass spectral molecular ion and fragmentation patterns, IR, and 300-MHz 1 H NMR. ...
The project has been successfully incorporated into our upper-level advanced organic chemistry laboratory. ...
Hydrogen correlations also aid in the assignment of the methyl groups.
Molecular Modeling Component The project can be augmented with a simple molecular modeling exercise. ...
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Cellular Base of Mint Allelopathy: Menthone Affects Plant Microtubules
<span title="2020-09-16">2020</span>
<i title="Frontiers Media SA">
<a target="_blank" rel="noopener" href="https://fatcat.wiki/container/bbmitkj3efgeppizzjrx6w5emu" style="color: black;">Frontiers in Plant Science</a>
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Mints produce essential oils, which are known to affect the growth of other plants. ...
We used a comparative approach to identify allelopathic compounds from different Mints (genus Mentha, but also including Cat Mint, Nepeta cataria, and Corean Mint, Agastache rugosa, belonging to sisters ...
MS's research was funded through Scholarship from the Iraqi Ministry of Higher Education and Scientific Research, a grant from the Karlsruhe House of young Scientists (KHYS) and a Scholarship from the ...
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