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MICheck: a web tool for fast checking of syntactic annotations of bacterial genomes
2005
Nucleic Acids Research
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In the context of the numerous re-annotation projects for microbial genomes, this tool can be seen as a preliminary step before the functional re-annotation step to check quickly for missing or wrongly ...
Here, we present a new web program, MICheck (MIcrobial genome Checker), that enables rapid verification of sets of annotated genes and frameshifts in previously published bacterial genomes. ...
We thank the entire system network team of Genoscope for its essential contribution to the efficiency of the MICheck website. ...
doi:10.1093/nar/gki498
pmid:15980515
pmcid:PMC1160258
fatcat:mn53x2pqnbc3xjvm6dgeo32xse
The automatic annotation of bacterial genomes
2012
Briefings in Bioinformatics
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A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2019; you can also visit the original URL.
The file type is application/pdf.
Acknowledgements We would like to acknowledge the help, assistance and advice provided by staff at the NCBI and EBI during genome submission. ...
There is also MICheck [28] which checks annotated sequences for syntactic errors. ...
Once coding regions have been identified, they are aligned either to a reference genome annotation or the entirety of UniProt [17] using fast sequence alignment tools (e.g. ...
doi:10.1093/bib/bbs007
pmid:22408191
pmcid:PMC3548604
fatcat:pq3dovwltfdbddypybczsbpc7y