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MADMX: A Novel Strategy for Maximal Dense Motif Extraction [chapter]

Roberto Grossi, Andrea Pietracaprina, Nadia Pisanti, Geppino Pucci, Eli Upfal, Fabio Vandin
2009 Lecture Notes in Computer Science  
By extracting only maximal dense motifs, madmx reduces the output size and improves performance, while enhancing the quality of the discoveries.  ...  The efficiency of our approach relies on a newly defined combining operation, dubbed fusion, which allows for the construction of maximal dense motifs in a bottom-up fashion, while avoiding the generation  ...  Mazzucco and Francesco Peruch for coding madmx.  ... 
doi:10.1007/978-3-642-04241-6_30 fatcat:tcvmroh4wfekppergdq7phaqh4

MADMX: A Novel Strategy for Maximal Dense Motif Extraction [article]

Roberto Grossi, Andrea Pietracaprina, Nadia Pisanti, Geppino Pucci, Eli Upfal, Fabio Vandin
2010 arXiv   pre-print
By extracting only maximal dense motifs, MADMX reduces the output size and improves performance, while enhancing the quality of the discoveries.  ...  The efficiency of our approach relies on a newly defined combining operation, dubbed fusion, which allows for the construction of maximal dense motifs in a bottom-up fashion, while avoiding the generation  ...  Mazzucco and Francesco Peruch for coding madmx.  ... 
arXiv:1002.0874v1 fatcat:vvnxeucwqzdznjqkv3hrx4a5cq