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Kvik: three-tier data exploration tools for flexible analysis of genomic data in epidemiological studies

Bjørn Fjukstad, Karina Standahl Olsen, Mie Jareid, Eiliv Lund, Lars Ailo Bongo
2015 F1000Research  
Kvik is an open-source framework that we developed for explorative analysis of functional genomics data from large epidemiological studies.  ...  We have used Kvik Pathways to explore data from both a cross-sectional study design and a case-control study within the Norwegian Women and Cancer (NOWAC) cohort.  ...  Acknowledgements Gene expression profiles were analyzed at the Microarray Resource Center Tromsø, UiT -The Arctic university of Norway.  ... 
doi:10.12688/f1000research.6238.2 pmid:26425340 pmcid:PMC4574765 fatcat:pvo6qxdh3bd73gaksj4vzja7sq

Kvik: three-tier data exploration tools for flexible analysis of genomic data in epidemiological studies

Bjørn Fjukstad, Karina Standahl Olsen, Mie Jareid, Eiliv Lund, Lars Ailo Bongo
2015 F1000Research  
Kvik is an open-source system that we developed for explorative analysis of functional genomics data from large epidemiological studies.  ...  In this note, we describe how we used Kvik to develop the Kvik Pathways application to explore gene expression data from healthy women with high and low plasma ratios of essential fatty acids using biological  ...  Acknowledgements Gene expression profiles were analyzed at the Microarray Resource Center Tromsø, UiT -The Arctic university of Norway.  ... 
doi:10.12688/f1000research.6238.1 fatcat:umkcuc3iujhbpkryaliin53ni4