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Integrated Bio-Search: challenges and trends for the integration, search and comprehensive processing of biological information

Marco Masseroli, Barend Mons, Erik Bongcam-Rudloff, Stefano Ceri, Alexander Kel, François Rechenmann, Frederique Lisacek, Paolo Romano
2014 BMC Bioinformatics  
The needs and opportunities of Genomic Computing (the integration, search and display of genomic information at a very specific level, e.g. at the level of a single DNA region) are then considered.  ...  Third, some of the main outstanding issues, challenges and trends are analysed.  ...  They especially want to thank Mark Wilkinson and Paolo Missier for their fundamental suggestions and comments that allowed the authors to significantly improve this paper.  ... 
doi:10.1186/1471-2105-15-s1-s2 pmid:24564249 pmcid:PMC4015876 fatcat:xv4pyzwxtnfnjhquglv4j4lpna

NETTAB 2012 on "Integrated Bio-Search"

Paolo Romano, Frédérique Lisacek, Marco Masseroli
2014 BMC Bioinformatics  
, integrating and analyzing data, information, and knowledge with the aim of answering complex bio-medical-molecular questions, i.e. some of the most challenging issues in bioinformatics today.  ...  The NETTAB 2012 workshop, held in Como on November 14-16, 2012, was devoted to "Integrated Bio-Search", that is to technologies, methods, architectures, systems and applications for searching, retrieving  ...  Masseroli, Mons et al. present some of the challenges and trends for the integration, search and processing of biological information [5] .  ... 
doi:10.1186/1471-2105-15-s1-s1 pmid:24564635 pmcid:PMC4015131 fatcat:el6t43fk4fcyhad22kfiebif7m

EMBnet.journal 18 Suppl. B

EMBnet Journal
2012 EMBnet journal  
National Research Council of Italy (CNR) and the Polish Academy of Sciences (PAN Acknowledgements This work is partial fulfillment of the research objective of "DM19410 -Laboratorio di Bioinformatica  ...  This paper revises and extends the paper "ONCO-i2b2: improve patients selection through case-based information retrieval techniques", by D.  ...  Data integration is essential to comprehensively evaluate and search information from different databanks.  ... 
doi:10.14806/ej.18.b.592 fatcat:wlwsmbdlfzbjtk7vyhiabdov6q

Can the vector space model be used to identify biological entity activities?

Wesley D Maciel, Alessandra C Faria-Campos, Marcos A Gonçalves, Sérgio VA Campos
2011 BMC Genomics  
Biological systems are commonly described as networks of entity interactions. Some interactions are already known and integrate the current knowledge in life sciences.  ...  Others remain unknown for long periods of time and are frequently discovered by chance.  ...  This article has been published as part of BMC Genomics Volume 12 Supplement 4, 2011: Proceedings of the 6th International Conference of the Brazilian Association for Bioinformatics and Computational Biology  ... 
doi:10.1186/1471-2164-12-s4-s1 pmid:22369514 pmcid:PMC3287578 fatcat:as6r5uvujfeebdc5ljgbq26kzu

Seaweed Biodiversity of India: Reviewing Current Knowledge to Identify Gaps, Challenges and Opportunities

Mantri, Kavale, Kazi
2019 Diversity  
in Indiaalong with the gaps, challenges, and opportunities.  ...  Although the recent inventory from theIndian region documented the presence of approximately 865 seaweed taxa, of which only a few aretaxonomically well characterized, more precise information still awaits  ...  Acknowledgments: We are thankful to Amitava Das, Director, for encouragement and facilities. The authors thank V. Veeragurunathan for preparation of the graph on new taxa from Indian waters.  ... 
doi:10.3390/d12010013 fatcat:zbwtltrt6nabpn65rk7fqkjncy