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Individual Analysis of Molecular Brain Imaging Data Through Automatic Identification of Abnormality Patterns [chapter]

Ninon Burgos, Jorge Samper-González, Anne Bertrand, Marie-Odile Habert, Sébastien Ourselin, Stanley Durrleman, M. Jorge Cardoso, Olivier Colliot
<span title="">2017</span> <i title="Springer International Publishing"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/2w3awgokqne6te4nvlofavy5a4" style="color: black;">Lecture Notes in Computer Science</a> </i> &nbsp;
We introduce a pipeline for the individual analysis of positron emission tomography (PET) data on large cohorts of patients.  ...  This pipeline consists for each individual of generating a subject-specific model of healthy PET appearance and comparing the individual's PET image to the model via a novel regularised Z-score.  ...  Discussion and conclusion This paper presents a pipeline for the individual analysis of molecular brain images on large-scale datasets.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1007/978-3-319-67564-0_2">doi:10.1007/978-3-319-67564-0_2</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/qqs2khmbhvfjvhlaw66k2ytkti">fatcat:qqs2khmbhvfjvhlaw66k2ytkti</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180722190717/https://hal.inria.fr/hal-01567343/file/paperBurgos.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/ac/54/ac54896643ab3c6f7912a0ee81cbf7fbd22b2049.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1007/978-3-319-67564-0_2"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> springer.com </button> </a>

Abnormal phospholipids distribution in the prefrontal cortex from a patient with schizophrenia revealed by matrix-assisted laser desorption/ionization imaging mass spectrometry

Junya Matsumoto, Yuki Sugiura, Dai Yuki, Takahiro Hayasaka, Naoko Goto-Inoue, Nobuhiro Zaima, Yasuto Kunii, Akira Wada, Qiaohui Yang, Keisuke Nishiura, Hiroyasu Akatsu, Akira Hori (+5 others)
<span title="2011-04-02">2011</span> <i title="Springer Nature"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/yspvheu7nrfg3hcgxvozndz22q" style="color: black;">Analytical and Bioanalytical Chemistry</a> </i> &nbsp;
IMS revealed abnormal distributions of phosphatidylcholine molecular species particularly in the cortical layer of frontal cortex region.  ...  In addition, the combined use of liquid chromatography/electrospray ionization tandem mass spectrometry strengthened the capability for identification of numerous lipid molecular species.  ...  We extracted data only from the corresponding brain areas by the imaging-based analysis.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1007/s00216-011-4909-3">doi:10.1007/s00216-011-4909-3</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/21461619">pmid:21461619</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC3098351/">pmcid:PMC3098351</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/vup544jpqnbabfqmkwhe26pwdu">fatcat:vup544jpqnbabfqmkwhe26pwdu</a> </span>
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Precision Medicine in Neonates: A Tailored Approach to Neonatal Brain Injury

Maria Luisa Tataranno, Daniel C. Vijlbrief, Jeroen Dudink, Manon J. N. L. Benders
<span title="2021-05-19">2021</span> <i title="Frontiers Media SA"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/nyffpqbfy5fvrl6y7b6b4gokh4" style="color: black;">Frontiers in Pediatrics</a> </i> &nbsp;
A synergy of all these techniques and the use of automatic quantitative analysis might give clinicians the possibility to provide patient-targeted decision-making for individualized diagnosis, therapy,  ...  New algorithms based on large databases and machine learning applied to clinical, neuromonitoring, and neuroimaging data and genetic analysis and assays measuring multiple biomarkers (omics) can fulfill  ...  The main aims of quantitative neonatal MRI are: the development of automatic algorithms for images interpretation (58), the detection, measurement, and characterization of "subtle" brain abnormalities/  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3389/fped.2021.634092">doi:10.3389/fped.2021.634092</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/34095022">pmid:34095022</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC8171663/">pmcid:PMC8171663</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ovqivkc7xzc4hh5asr6n36e63e">fatcat:ovqivkc7xzc4hh5asr6n36e63e</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210520004845/https://fjfsdata01prod.blob.core.windows.net/articles/files/634092/pubmed-zip/.versions/1/.package-entries/fped-09-634092/fped-09-634092.pdf?sv=2018-03-28&amp;sr=b&amp;sig=SynKkTeSPpa77ceuR6Tt%2B%2BeSsh6OERGh3WQndwYximY%3D&amp;se=2021-05-20T00%3A49%3A15Z&amp;sp=r&amp;rscd=attachment%3B%20filename%2A%3DUTF-8%27%27fped-09-634092.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/74/e7/74e78988e23b95691674813cd1767c71cb8ceb3c.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3389/fped.2021.634092"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> frontiersin.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8171663" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Brain Tumor identification by Convolution Neural Network with Fuzzy C-mean Model Using MR Brain Images

Abd El Kader Isselmou, Guizhi Xu, Zhang Shuai, Sani Saminu, Imran Javaid, Isah Salim Ahmad
<span title="2021-01-12">2021</span> <i title="North Atlantic University Union (NAUN)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/pozhhqfrgbdn7cv2fsvqjd7gva" style="color: black;">North atlantic university union: International Journal of Circuits, Systems and Signal Processing</a> </i> &nbsp;
Due to the complexity of the brain structure, we choose to use MR brain images because of their quality and the highest resolution.  ...  In addition, the novel model can identify the brain tumor, using different types of MR images. The proposed model obtained accuracy with 98%.  ...  of the images individually.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.46300/9106.2020.14.137">doi:10.46300/9106.2020.14.137</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/kzph2secivdptjeirp7onifn6y">fatcat:kzph2secivdptjeirp7onifn6y</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210115154901/https://www.naun.org/main/NAUN/circuitssystemssignal/2020/c782005-eat.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/38/07/38078fd6f2097cfce07b941d598af8449743b784.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.46300/9106.2020.14.137"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

Multimodality Data Integration in Epilepsy

Otto Muzik, Diane C. Chugani, Guangyu Zou, Jing Hua, Yi Lu, Shiyong Lu, Eishi Asano, Harry T. Chugani
<span title="">2007</span> <i title="Hindawi Limited"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/a5p2e7p4xfg23hvv3wca3cde5u" style="color: black;">International Journal of Biomedical Imaging</a> </i> &nbsp;
Based on the developed software tools, quantitative results obtained from individual modalities can be merged into a data structure allowing a consistent framework for advanced data mining techniques and  ...  PET imaging.  ...  data, as well as the PET Center staff at Children's Hospital of Michigan for their assistance in performing the studies.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1155/2007/13963">doi:10.1155/2007/13963</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/17710251">pmid:17710251</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC1940316/">pmcid:PMC1940316</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ry72dtzyzvgxlkkgqcscnkued4">fatcat:ry72dtzyzvgxlkkgqcscnkued4</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20100704073014/http://www.cs.wayne.edu/~jinghua/publication/IJBI07.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/36/a2/36a221391d684278f2492c3f8300ded7929e0050.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1155/2007/13963"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> hindawi.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1940316" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Radiogenomics: What It Is and Why It Is Important

Maciej A. Mazurowski
<span title="">2015</span> <i title="Elsevier BV"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/77ksllzei5erxmc5ktrlk53njm" style="color: black;">Journal of the American College of Radiology</a> </i> &nbsp;
of individual datasets.  ...  Specifically, I argue that the significance of radiogenomics is largely related to practical limitations of currently available data that often lack complete characterization of the patients and poor integration  ...  The typical research methodology of the studies above involves manual or semi-automatic assessment of imaging features and their correlation with individual gene expressions, combined gene expression patterns  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.jacr.2015.04.019">doi:10.1016/j.jacr.2015.04.019</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/26250979">pmid:26250979</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/t3nehljrpzdtrizjnigdkylhka">fatcat:t3nehljrpzdtrizjnigdkylhka</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170809044746/http://deckard.duhs.duke.edu/~mazurowski/pdfs/mazurowski_jacr_2015_accepted_radiogenomics_importance.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/92/fe/92fe8bc5f0814094ae9ea415590be7561f3fa58e.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.jacr.2015.04.019"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> elsevier.com </button> </a>

Quantification and Discrimination of Abnormal Sulcal Patterns in Polymicrogyria

Kiho Im, Rudolph Pienaar, Michael J. Paldino, Nadine Gaab, Albert M. Galaburda, P. Ellen Grant
<span title="2012-09-17">2012</span> <i title="Oxford University Press (OUP)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/eeg67t2wzfd3dpiicxsttg3cxi" style="color: black;">Cerebral Cortex</a> </i> &nbsp;
We aimed to provide a quantitative description of abnormal sulcal patterns for individual PMG brains using our sulcal graph-based analysis and examined the association with language impairment.  ...  Polymicrogyria (PMG) is a malformation of cortical development characterized by an irregular gyral pattern and its diagnosis and severity have been qualitatively judged by visual inspection of imaging  ...  Our automatic detection of abnormal sulcal patterns was not successful for all PMG patients.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/cercor/bhs292">doi:10.1093/cercor/bhs292</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/22989584">pmid:22989584</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC3888213/">pmcid:PMC3888213</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/pvb4osn6wnfi3fj6dtgrp35p3y">fatcat:pvb4osn6wnfi3fj6dtgrp35p3y</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190225092955/http://pdfs.semanticscholar.org/6c0b/e3d8bfadb581d205824134441059fe08065d.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/6c/0b/6c0be3d8bfadb581d205824134441059fe08065d.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/cercor/bhs292"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> oup.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3888213" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

The surveillance state of behavioral automation

Andreas T Schaefer, Adam Claridge-Chang
<span title="">2012</span> <i title="Elsevier BV"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/k3yjoadbwjdifhgyc2nqlfzg2u" style="color: black;">Current Opinion in Neurobiology</a> </i> &nbsp;
Genetics' demand for increased throughput is driving automatization of behavior analysis far beyond experimental workhorses like circadian monitors and the operant conditioning box.  ...  Ironically, a central theme of current automatization is to improve observation of animals in increasingly naturalistic environments.  ...  Acknowledgements The authors want to thank David Bannerman, Thorsten Bus and Tim Lebestky for critical comments to earlier versions of this review.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.conb.2011.11.004">doi:10.1016/j.conb.2011.11.004</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/22119142">pmid:22119142</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC3398388/">pmcid:PMC3398388</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/x7z5gisk3ffwldercwonzw4h4q">fatcat:x7z5gisk3ffwldercwonzw4h4q</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170929112703/http://publisher-connector.core.ac.uk/resourcesync/data/elsevier/pdf/79b/aHR0cDovL2FwaS5lbHNldmllci5jb20vY29udGVudC9hcnRpY2xlL3BpaS9zMDk1OTQzODgxMTAwMTk0Mg%3D%3D.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/b8/ac/b8ac178353175e723f8f137fde5a6277c9a2cb38.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.conb.2011.11.004"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> elsevier.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3398388" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Molecular MALDI imaging: An emerging technology for neuroscience studies

Maxence Wisztorski, Dominique Croix, Eduardo Macagno, Isabelle Fournier, Michel Salzet
<span title="">2008</span> <i title="Wiley"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/e4fmesss3fcunmn2exp3kl3fq4" style="color: black;">Developmental Neurobiology</a> </i> &nbsp;
We review the increasing application of MALDI Imaging to the analysis of molecular distributions of proteins and peptides in nervous tissues of both vertebrates and invertebrates, focusing in particular  ...  Mass spectrometry (MS) has become an essential tool for the detection, identification, and characterization of the molecular components of biological processes, such as those responsible for the dynamic  ...  Protein patterns in the affected Figure 3 MALDI Imaging analysis of rodent brain slices.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/dneu.20623">doi:10.1002/dneu.20623</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/18383549">pmid:18383549</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/iyoe3nfhsfdevmxyfisek7en4i">fatcat:iyoe3nfhsfdevmxyfisek7en4i</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170808170333/http://www.laboratoire-prism.fr/IMG/pdf/wisztorski_devneurobiol_2008_68_6__845.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/4d/7a/4d7a32bad526a44d0cd76ba2492419c4c110a6c8.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/dneu.20623"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> wiley.com </button> </a>

Artificial intelligence in clinical and genomic diagnostics

Raquel Dias, Ali Torkamani
<span title="2019-11-19">2019</span> <i title="Springer Science and Business Media LLC"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/odidfbcgarekjpyyfxpdptajxa" style="color: black;">Genome Medicine</a> </i> &nbsp;
biases that must be carefully addressed for the successful deployment of AI in medical applications, particularly those utilizing human genetics and genomics data.  ...  Finally, we end with a discussion on the future potential of AI in individualized medicine applications, especially for risk prediction in common complex diseases, and the challenges, limitations, and  ...  In addition, speech recognition can be used as a tool to streamline the use of EHRs through automatic transcription, benefitting clinicians and patients and enabling natural language processing (NLP) analysis  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/s13073-019-0689-8">doi:10.1186/s13073-019-0689-8</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/31744524">pmid:31744524</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC6865045/">pmcid:PMC6865045</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/3l6ouhzgmbeypdvh3qg4mufmai">fatcat:3l6ouhzgmbeypdvh3qg4mufmai</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20191128094450/https://genomemedicine.biomedcentral.com/track/pdf/10.1186/s13073-019-0689-8" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/48/f8/48f8ad3745c03879586381b59452b501e55a98b6.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/s13073-019-0689-8"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> springer.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6865045" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

BRAIN Initiative: Cutting-Edge Tools and Resources for the Community

Elizabeth Litvina, Amy Adams, Alison Barth, Marcel Bruchez, James Carson, Jason E. Chung, Kristin B. Dupre, Loren M. Frank, Kathleen M. Gates, Kristen M. Harris, Hannah Joo, Jeff William Lichtman (+5 others)
<span title="2019-10-16">2019</span> <i title="Society for Neuroscience"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/s7bticdwizdmhll4taefg57jde" style="color: black;">Journal of Neuroscience</a> </i> &nbsp;
The overarching goal of the NIH BRAIN (Brain Research through Advancing Innovative Neurotechnologies) Initiative is to advance the understanding of healthy and diseased brain circuit function through technological  ...  These tools access neural circuits at multiple levels of analysis, from subcellular composition to brain-wide network connectivity, including the following: integrated systems for EM- and florescence-based  ...  This schematic outlines the steps of the partially automated pipeline, from live imaging and sample fixation and sample fixation through to data output and analysis.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1523/jneurosci.1169-19.2019">doi:10.1523/jneurosci.1169-19.2019</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/31619497">pmid:31619497</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC6794930/">pmcid:PMC6794930</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/zwslvh3tozd5flp64cwtnenccu">fatcat:zwslvh3tozd5flp64cwtnenccu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200508163541/https://escholarship.org/content/qt3572p0s2/qt3572p0s2.pdf?t=q1fdt5" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/24/0f/240fa2a124c3f07879b20a3e16d304eee3d2325e.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1523/jneurosci.1169-19.2019"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6794930" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Three-dimensional micro-MRI analysis of cerebral artery development in mouse embryos

Cesar A. Berrios-Otero, Youssef Zaim Wadghiri, Brian J. Nieman, Alexandra L. Joyner, Daniel H. Turnbull
<span title="">2009</span> <i title="Wiley"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/34p2n5u2vjfgrf7j2rmkmfhogu" style="color: black;">Magnetic Resonance in Medicine</a> </i> &nbsp;
Three-dimensional magnetic resonance micro-imaging (micro-MRI) data were acquired simultaneously from multiple embryos staged between 10 and 17 days of gestation, and a variety of image analysis methods  ...  The results show that the primary arterial branches in the mouse brain are very similar between individuals, with the patterns established early and growth occurring by extension of the segments, while  ...  John Sled and Mark Henkelman at the Mouse Imaging Centre in Toronto, Canada, for providing analysis software used for image coregistration and averaging.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/mrm.22113">doi:10.1002/mrm.22113</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/19859945">pmid:19859945</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC2859666/">pmcid:PMC2859666</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/epp2dhfzrzbjncsvdo53qt5vgi">fatcat:epp2dhfzrzbjncsvdo53qt5vgi</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20150912153720/http://www.med.nyu.edu/skirball-lab/turnbulllab/PDFS/BerriosMRM09.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/b2/4d/b24d18b0c1f3cf816ed9c89fdd9692077b5aad56.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/mrm.22113"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> wiley.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2859666" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Artificial intelligence for molecular neuroimaging

Amanda J. Boyle, Vincent C. Gaudet, Sandra E. Black, Neil Vasdev, Pedro Rosa-Neto, Katherine A. Zukotynski
<span title="">2021</span> <i title="AME Publishing Company"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/u5ioqxxruvelzolwnumjlphsfe" style="color: black;">Annals of Translational Medicine</a> </i> &nbsp;
Limitations and future prospects for AI in molecular brain imaging are also discussed.  ...  imaging of the central nervous system.  ...  Her peer reviewed research on molecular imaging in dementia has received in kind support through provision of amyloid PET ligands from Lilly Avid, and GE Healthcare.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.21037/atm-20-6220">doi:10.21037/atm-20-6220</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/xvezzeyihfev3logqda6fmqt3e">fatcat:xvezzeyihfev3logqda6fmqt3e</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210516022413/https://atm.amegroups.com/article/viewFile/62423/pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/82/09/8209aec4edd38101a6c03b8302357340de51c7b4.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.21037/atm-20-6220"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> Publisher / doi.org </button> </a>

Revolution of Alzheimer Precision Neurology. Passageway of Systems Biology and Neurophysiology

Harald Hampel, Nicola Toschi, Claudio Babiloni, Filippo Baldacci, Keith L. Black, Arun L.W. Bokde, René S. Bun, Francesco Cacciola, Enrica Cavedo, Patrizia A. Chiesa, Olivier Colliot, Cristina-Maria Coman (+32 others)
<span title="2018-06-12">2018</span> <i title="IOS Press"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/uux5o5kf5zaednhl4637xcmbte" style="color: black;">Journal of Alzheimer&#39;s Disease</a> </i> &nbsp;
dysfunction within distinct molecular, cellular and large-scale neural network systems in both animal models as well as through tests for the usefulness of these candidate dynamic systems biomarkers in  ...  This translational research path is paralleled by an "omics"-based, hypothesis-free, exploratory research pathway, which will collect multimodal data from progressing asymptomatic, preclinical and clinical  ...  automatic analysis of a longitudinal data set to this new individual.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3233/jad-179932">doi:10.3233/jad-179932</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/29562524">pmid:29562524</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC6008221/">pmcid:PMC6008221</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/j3u6gkzfqbg47kv4o2hpkjadn4">fatcat:j3u6gkzfqbg47kv4o2hpkjadn4</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190302130401/http://pdfs.semanticscholar.org/a3c5/16e05c8b9390770e37a22d5101720c5256b2.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/a3/c5/a3c516e05c8b9390770e37a22d5101720c5256b2.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3233/jad-179932"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6008221" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Medical imaging diagnosis of early Alzheimer rsquo s disease

Ayman El-Baz
<span title="">2018</span> <i title="Frontiers in Bioscience"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/mfwufqll45bepinkdxuteuecia" style="color: black;">Frontiers in Bioscience</a> </i> &nbsp;
- Brain Region Voxels regions. Note: for automatically based identification of ROIs, each FDG-PET scan is segmented, getting a partitioning of the image into regions (clusters) using DBSCAN.  ...  PET has proven a powerful tool for demonstrating the alterations of the brain functions, in healthy controls or dementia patients, with imaging reflecting properties of the brain at the molecular and cellular  ...  For example, the movement of patients during the image acquisition process introduces a source of the  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.2741/4612">doi:10.2741/4612</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/28930568">pmid:28930568</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/6f5gzcdyireuro3ylaswz2p734">fatcat:6f5gzcdyireuro3ylaswz2p734</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190223092549/http://pdfs.semanticscholar.org/4d17/01229130d905f45c13fdd18aa6d64594642c.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/4d/17/4d1701229130d905f45c13fdd18aa6d64594642c.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.2741/4612"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>
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